RNA–Protein interactions for RNA: ENST00000597928.5

USHBP1-207, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2

Gene USHBP1, Length 3,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-207ENST00000597928 ANO1Q5XXA6 986 aa14.33□□□□□ -0.12
USHBP1-207ENST00000597928 DHX58Q96C10 678 aa14.33□□□□□ -0.12
USHBP1-207ENST00000597928 ZBTB1Q9Y2K1 713 aa14.33□□□□□ -0.12
USHBP1-207ENST00000597928 CYP2D7A0A087X1C5 515 aa14.33□□□□□ -0.12
USHBP1-207ENST00000597928 BTBD18B2RXH4 712 aa14.33□□□□□ -0.12
USHBP1-207ENST00000597928 FOXO4P98177 505 aa14.33□□□□□ -0.12
USHBP1-207ENST00000597928 MAP3K12Q12852 859 aa14.33□□□□□ -0.12
USHBP1-207ENST00000597928 TEX35Q5T0J7 233 aa14.33□□□□□ -0.12
USHBP1-207ENST00000597928 MYSM1Q5VVJ2 828 aa14.33□□□□□ -0.12
USHBP1-207ENST00000597928 TMEM87AQ8NBN3 555 aa14.33□□□□□ -0.12
USHBP1-207ENST00000597928 CCDC191Q8NCU4 936 aa14.33□□□□□ -0.12
USHBP1-207ENST00000597928 CABP5Q9NP86 173 aa14.33□□□□□ -0.12
USHBP1-207ENST00000597928 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.32□□□□□ -0.12
USHBP1-207ENST00000597928 PFKFB1P16118 471 aa14.32□□□□□ -0.12
USHBP1-207ENST00000597928 DIP2AQ14689 1571 aa14.32□□□□□ -0.12
USHBP1-207ENST00000597928 RFX5P48382 616 aaPredicted RBP14.32□□□□□ -0.12
USHBP1-207ENST00000597928 APPBP2Q92624 585 aa14.32□□□□□ -0.12
USHBP1-207ENST00000597928 NACAP1Q9BZK3 213 aa14.32□□□□□ -0.12
USHBP1-207ENST00000597928 TCIRG1Q13488 830 aa14.32□□□□□ -0.12
USHBP1-207ENST00000597928 MTERF4Q7Z6M4 381 aaKnown RBP14.32□□□□□ -0.12
USHBP1-207ENST00000597928 JMYQ8N9B5 988 aa14.32□□□□□ -0.12
USHBP1-207ENST00000597928 CCDC94Q9BW85 323 aaPredicted RBP14.32□□□□□ -0.12
USHBP1-207ENST00000597928 CTAGE5O15320 804 aa14.31□□□□□ -0.12
USHBP1-207ENST00000597928 LONRF3Q496Y0 759 aa14.31□□□□□ -0.12
USHBP1-207ENST00000597928 FAM182BQ5T319 152 aa14.31□□□□□ -0.12
USHBP1-207ENST00000597928 NIP7Q9Y221 180 aaKnown RBP eCLIP14.31□□□□□ -0.12
USHBP1-207ENST00000597928 TECPR2O15040 1411 aa14.31□□□□□ -0.12
USHBP1-207ENST00000597928 FAM170AA1A519 330 aa14.31□□□□□ -0.12
USHBP1-207ENST00000597928 EXOC5O00471 708 aa14.31□□□□□ -0.12
USHBP1-207ENST00000597928 POLR2DO15514 142 aaKnown RBP14.31□□□□□ -0.12
USHBP1-207ENST00000597928 IGHMBP2P38935 993 aaKnown RBP14.31□□□□□ -0.12
USHBP1-207ENST00000597928 LRRC8AQ8IWT6 810 aa14.31□□□□□ -0.12
USHBP1-207ENST00000597928 CARMIL3Q8ND23 1372 aa14.31□□□□□ -0.12
USHBP1-207ENST00000597928 SPATA31D1Q6ZQQ2 1576 aa14.31□□□□□ -0.12
USHBP1-207ENST00000597928 KIF28PB7ZC32 967 aa14.31□□□□□ -0.12
USHBP1-207ENST00000597928 FOXN1O15353 648 aa14.31□□□□□ -0.12
USHBP1-207ENST00000597928 MCAMP43121 646 aa14.31□□□□□ -0.12
USHBP1-207ENST00000597928 PDE4CQ08493 712 aa14.31□□□□□ -0.12
USHBP1-207ENST00000597928 PIH1D3Q9NQM4 214 aaKnown RBP14.31□□□□□ -0.12
USHBP1-207ENST00000597928 PEAK1Q9H792 1746 aa14.3□□□□□ -0.12
USHBP1-207ENST00000597928 ATP6V1AP38606 617 aa14.3□□□□□ -0.12
USHBP1-207ENST00000597928 ADKP55263 362 aaKnown RBP14.3□□□□□ -0.12
USHBP1-207ENST00000597928 GNG11P61952 73 aa14.3□□□□□ -0.12
USHBP1-207ENST00000597928 NR5A1Q13285 461 aa14.3□□□□□ -0.12
USHBP1-207ENST00000597928 CCDC102BQ68D86 513 aa14.3□□□□□ -0.12
USHBP1-207ENST00000597928 KCNG4Q8TDN1 519 aa14.3□□□□□ -0.12
USHBP1-207ENST00000597928 VAT1LQ9HCJ6 419 aa14.3□□□□□ -0.12
USHBP1-207ENST00000597928 COL15A1P39059 1388 aa14.3□□□□□ -0.12
USHBP1-207ENST00000597928 ITSN1Q15811 1721 aa14.3□□□□□ -0.12
USHBP1-207ENST00000597928 WTAPQ15007 396 aa14.3□□□□□ -0.12
USHBP1-207ENST00000597928 DESI2Q9BSY9 194 aa14.3□□□□□ -0.12
USHBP1-207ENST00000597928 EPC1Q9H2F5 836 aa14.3□□□□□ -0.12
USHBP1-207ENST00000597928 LZTFL1Q9NQ48 299 aa14.3□□□□□ -0.12
USHBP1-207ENST00000597928 ANGEL1Q9UNK9 670 aaKnown RBP14.3□□□□□ -0.12
USHBP1-207ENST00000597928 DIP2BQ9P265 1576 aa14.3□□□□□ -0.12
USHBP1-207ENST00000597928 KIAA1468Q9P260 1216 aa14.29□□□□□ -0.12
USHBP1-207ENST00000597928 H7C1W4 665 aa14.29□□□□□ -0.12
USHBP1-207ENST00000597928 GYG1P46976 350 aa14.29□□□□□ -0.12
USHBP1-207ENST00000597928 ZNF174Q15697 407 aa14.29□□□□□ -0.12
USHBP1-207ENST00000597928 ERCC6LQ2NKX8 1250 aa14.29□□□□□ -0.12
USHBP1-207ENST00000597928 CYB5R4Q7L1T6 521 aa14.29□□□□□ -0.12
USHBP1-207ENST00000597928 SMYD4Q8IYR2 804 aaPredicted RBP14.29□□□□□ -0.12
USHBP1-207ENST00000597928 PIGBQ92521 554 aa14.29□□□□□ -0.12
USHBP1-207ENST00000597928 UBXN4Q92575 508 aa14.29□□□□□ -0.12
USHBP1-207ENST00000597928 HINFPQ9BQA5 517 aa14.29□□□□□ -0.12
USHBP1-207ENST00000597928 DSCC1Q9BVC3 393 aa14.29□□□□□ -0.12
USHBP1-207ENST00000597928 VPS54Q9P1Q0 977 aa14.29□□□□□ -0.12
USHBP1-207ENST00000597928 CDKL5O76039 1030 aa14.29□□□□□ -0.12
USHBP1-207ENST00000597928 SLC5A1P13866 664 aa14.29□□□□□ -0.12
USHBP1-207ENST00000597928 FANCCQ00597 558 aa14.29□□□□□ -0.12
USHBP1-207ENST00000597928 ATP2B2Q01814 1243 aa14.29□□□□□ -0.12
USHBP1-207ENST00000597928 TBC1D10CQ8IV04 446 aa14.29□□□□□ -0.12
USHBP1-207ENST00000597928 DIS3L2Q8IYB7 885 aaKnown RBP14.29□□□□□ -0.12
USHBP1-207ENST00000597928 FBXO18Q8NFZ0 1043 aa14.29□□□□□ -0.12
USHBP1-207ENST00000597928 TFCP2L1Q9NZI6 479 aa14.29□□□□□ -0.12
USHBP1-207ENST00000597928 CDC25AP30304 524 aa14.28□□□□□ -0.12
USHBP1-207ENST00000597928 FANCLQ9NW38 375 aa14.28□□□□□ -0.12
USHBP1-207ENST00000597928 CGNQ9P2M7 1197 aaKnown RBP14.28□□□□□ -0.12
USHBP1-207ENST00000597928 PCDH11XQ9BZA7 1347 aa14.28□□□□□ -0.12
USHBP1-207ENST00000597928 PCDH11YQ9BZA8 1340 aa14.28□□□□□ -0.12
USHBP1-207ENST00000597928 PDE6AP16499 860 aa14.28□□□□□ -0.12
USHBP1-207ENST00000597928 RTN1Q16799 776 aa14.28□□□□□ -0.12
USHBP1-207ENST00000597928 ZNF710Q8N1W2 664 aa14.28□□□□□ -0.12
USHBP1-207ENST00000597928 SMTNL1A8MU46 457 aa14.28□□□□□ -0.12
USHBP1-207ENST00000597928 FDPSP14324 419 aaKnown RBP14.28□□□□□ -0.12
USHBP1-207ENST00000597928 NAA16Q6N069 864 aaPredicted RBP14.28□□□□□ -0.12
USHBP1-207ENST00000597928 FUCA2Q9BTY2 467 aa14.28□□□□□ -0.12
USHBP1-207ENST00000597928 RCOR1Q9UKL0 485 aa14.28□□□□□ -0.12
USHBP1-207ENST00000597928 RIMBP3CA6NJZ7 1639 aa14.27□□□□□ -0.12
USHBP1-207ENST00000597928 RIMBP3BA6NNM3 1639 aa14.27□□□□□ -0.12
USHBP1-207ENST00000597928 RIMBP3Q9UFD9 1639 aa14.27□□□□□ -0.12
USHBP1-207ENST00000597928 BAZ2BQ9UIF8 2168 aaKnown RBP14.27□□□□□ -0.12
USHBP1-207ENST00000597928 CDC27P30260 824 aa14.27□□□□□ -0.13
USHBP1-207ENST00000597928 CCT6AP40227 531 aaKnown RBP14.27□□□□□ -0.13
USHBP1-207ENST00000597928 DNA2P51530 1060 aa14.27□□□□□ -0.13
USHBP1-207ENST00000597928 FAM47AQ5JRC9 791 aa14.27□□□□□ -0.13
USHBP1-207ENST00000597928 LINC00301Q8NCQ3 95 aa14.27□□□□□ -0.13
USHBP1-207ENST00000597928 V9GY48 417 aaPredicted RBP14.27□□□□□ -0.13
USHBP1-207ENST00000597928 WTIPA6NIX2 430 aaPredicted RBP14.27□□□□□ -0.13
USHBP1-207ENST00000597928 SMIM22K7EJ46 135 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms