RNA–Protein interactions for RNA: ENST00000597354.1

CAPN12-206, Transcript of calpain 12, humanhuman

TSL 3

Gene CAPN12, Length 519 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN12-206ENST00000597354 HTRA3P83110 453 aa20.54■□□□□ 0.88
CAPN12-206ENST00000597354 PRMT6Q96LA8 375 aaPredicted RBP20.54■□□□□ 0.88
CAPN12-206ENST00000597354 LDHBP07195 334 aaKnown RBP20.53■□□□□ 0.88
CAPN12-206ENST00000597354 AAMPQ13685 434 aa20.53■□□□□ 0.88
CAPN12-206ENST00000597354 KRT26Q7Z3Y9 468 aa20.53■□□□□ 0.88
CAPN12-206ENST00000597354 ZBED3Q96IU2 234 aaPredicted RBP20.53■□□□□ 0.88
CAPN12-206ENST00000597354 NDUFB9Q9Y6M9 179 aa20.53■□□□□ 0.88
CAPN12-206ENST00000597354 PASKQ96RG2 1323 aa20.53■□□□□ 0.88
CAPN12-206ENST00000597354 CLRN2A0PK11 232 aa20.52■□□□□ 0.88
CAPN12-206ENST00000597354 SPDYE2BA6NHP3 402 aa20.52■□□□□ 0.88
CAPN12-206ENST00000597354 SPDYE6P0CI01 402 aa20.52■□□□□ 0.88
CAPN12-206ENST00000597354 MMP14P50281 582 aa20.52■□□□□ 0.88
CAPN12-206ENST00000597354 DIXDC1Q155Q3 683 aa20.52■□□□□ 0.88
CAPN12-206ENST00000597354 CDC37L1Q7L3B6 337 aa20.52■□□□□ 0.88
CAPN12-206ENST00000597354 SERPINA10Q9UK55 444 aa20.52■□□□□ 0.88
CAPN12-206ENST00000597354 SALL1Q9NSC2 1324 aa20.52■□□□□ 0.87
CAPN12-206ENST00000597354 ZAP70P43403 619 aa20.51■□□□□ 0.87
CAPN12-206ENST00000597354 HDAC1Q13547 482 aaPredicted RBP20.51■□□□□ 0.87
CAPN12-206ENST00000597354 MTMR14Q8NCE2 650 aa20.51■□□□□ 0.87
CAPN12-206ENST00000597354 TEKT1Q969V4 418 aa20.51■□□□□ 0.87
CAPN12-206ENST00000597354 ZNF408Q9H9D4 720 aa20.51■□□□□ 0.87
CAPN12-206ENST00000597354 SUGT1Q9Y2Z0 365 aa20.51■□□□□ 0.87
CAPN12-206ENST00000597354 PDS5AQ29RF7 1337 aaKnown RBP20.51■□□□□ 0.87
CAPN12-206ENST00000597354 ZBTB22O15209 634 aa20.5■□□□□ 0.87
CAPN12-206ENST00000597354 IGHDP01880 384 aa20.5■□□□□ 0.87
CAPN12-206ENST00000597354 APLP1P51693 650 aa20.5■□□□□ 0.87
CAPN12-206ENST00000597354 SULF1Q8IWU6 871 aa20.5■□□□□ 0.87
CAPN12-206ENST00000597354 ZGPATQ8N5A5 531 aaKnown RBP20.5■□□□□ 0.87
CAPN12-206ENST00000597354 TDRD3Q9H7E2 651 aaKnown RBP20.5■□□□□ 0.87
CAPN12-206ENST00000597354 AKAP11Q9UKA4 1901 aa20.5■□□□□ 0.87
CAPN12-206ENST00000597354 CYP2E1P05181 493 aaPredicted RBP20.49■□□□□ 0.87
CAPN12-206ENST00000597354 PRAMEF18Q5VWM3 479 aa20.49■□□□□ 0.87
CAPN12-206ENST00000597354 ERICH6Q7L0X2 663 aa20.49■□□□□ 0.87
CAPN12-206ENST00000597354 DZIP1Q86YF9 867 aaKnown RBP20.49■□□□□ 0.87
CAPN12-206ENST00000597354 ZNF512BQ96KM6 892 aaPredicted RBP20.49■□□□□ 0.87
CAPN12-206ENST00000597354 RWDD1Q9H446 243 aaPredicted RBP20.49■□□□□ 0.87
CAPN12-206ENST00000597354 VEZTQ9HBM0 779 aa20.49■□□□□ 0.87
CAPN12-206ENST00000597354 MAST3O60307 1309 aa20.49■□□□□ 0.87
CAPN12-206ENST00000597354 MYO1BO43795 1136 aa20.48■□□□□ 0.87
CAPN12-206ENST00000597354 HDLBPQ00341 1268 aaKnown RBP20.48■□□□□ 0.87
CAPN12-206ENST00000597354 ANKRD45Q5TZF3 282 aa20.48■□□□□ 0.87
CAPN12-206ENST00000597354 SPTY2D1Q68D10 685 aaPredicted RBP20.48■□□□□ 0.87
CAPN12-206ENST00000597354 RAI14Q9P0K7 980 aa20.48■□□□□ 0.87
CAPN12-206ENST00000597354 LRP2BPQ9P2M1 347 aa20.48■□□□□ 0.87
CAPN12-206ENST00000597354 CELF2O95319 508 aaKnown RBP20.47■□□□□ 0.87
CAPN12-206ENST00000597354 MECOMQ03112 1051 aa20.47■□□□□ 0.87
CAPN12-206ENST00000597354 B4GALNT3Q6L9W6 998 aa20.47■□□□□ 0.87
CAPN12-206ENST00000597354 PIH1D3Q9NQM4 214 aaKnown RBP20.47■□□□□ 0.87
CAPN12-206ENST00000597354 ZNF70Q9UC06 446 aaPredicted RBP20.47■□□□□ 0.87
CAPN12-206ENST00000597354 DAGLAQ9Y4D2 1042 aa20.47■□□□□ 0.87
CAPN12-206ENST00000597354 PITPNM2Q9BZ72 1349 aa20.47■□□□□ 0.87
CAPN12-206ENST00000597354 CACNB3P54284 484 aa20.46■□□□□ 0.87
CAPN12-206ENST00000597354 TSHZ3Q63HK5 1081 aa20.46■□□□□ 0.87
CAPN12-206ENST00000597354 APOBEC3HQ6NTF7 200 aaKnown RBP20.46■□□□□ 0.87
CAPN12-206ENST00000597354 HHIPL2Q6UWX4 724 aa20.46■□□□□ 0.87
CAPN12-206ENST00000597354 ZNF384Q8TF68 577 aa20.46■□□□□ 0.87
CAPN12-206ENST00000597354 GCC1Q96CN9 775 aa20.46■□□□□ 0.87
CAPN12-206ENST00000597354 ZDHHC15Q96MV8 337 aa20.46■□□□□ 0.87
CAPN12-206ENST00000597354 DNAJC2Q99543 621 aaKnown RBP20.46■□□□□ 0.87
CAPN12-206ENST00000597354 MRIQ9BWK5 157 aa20.46■□□□□ 0.87
CAPN12-206ENST00000597354 BOLA2Q9H3K6 86 aa20.46■□□□□ 0.87
CAPN12-206ENST00000597354 ANTXR1Q9H6X2 564 aa20.46■□□□□ 0.87
CAPN12-206ENST00000597354 SPDYE2Q495Y8 402 aa20.45■□□□□ 0.86
CAPN12-206ENST00000597354 CST9Q5W186 159 aa20.45■□□□□ 0.86
CAPN12-206ENST00000597354 APOBEC3FQ8IUX4 373 aaKnown RBP20.45■□□□□ 0.86
CAPN12-206ENST00000597354 OTUD7AQ8TE49 926 aaPredicted RBP20.45■□□□□ 0.86
CAPN12-206ENST00000597354 CDCA5Q96FF9 252 aa20.45■□□□□ 0.86
CAPN12-206ENST00000597354 ECM29Q5VYK3 1845 aa20.45■□□□□ 0.86
CAPN12-206ENST00000597354 MYO5AQ9Y4I1 1855 aaKnown RBP20.45■□□□□ 0.86
CAPN12-206ENST00000597354 MYH2Q9UKX2 1941 aa20.45■□□□□ 0.86
CAPN12-206ENST00000597354 TMEM88BA6NKF7 163 aa20.44■□□□□ 0.86
CAPN12-206ENST00000597354 TCP10L2B9ZVM9 353 aa20.44■□□□□ 0.86
CAPN12-206ENST00000597354 NSUN4Q96CB9 384 aaKnown RBP20.44■□□□□ 0.86
CAPN12-206ENST00000597354 EDC3Q96F86 508 aaKnown RBP20.44■□□□□ 0.86
CAPN12-206ENST00000597354 ZBTB47Q9UFB7 747 aaPredicted RBP20.44■□□□□ 0.86
CAPN12-206ENST00000597354 TRPM7Q96QT4 1865 aa20.43■□□□□ 0.86
CAPN12-206ENST00000597354 DEFB129Q9H1M3 183 aa20.43■□□□□ 0.86
CAPN12-206ENST00000597354 GOLIM4O00461 696 aa20.42■□□□□ 0.86
CAPN12-206ENST00000597354 IDH1O75874 414 aaKnown RBP20.42■□□□□ 0.86
CAPN12-206ENST00000597354 CENPBP07199 599 aaPredicted RBP20.42■□□□□ 0.86
CAPN12-206ENST00000597354 ATP5JP18859 108 aa20.42■□□□□ 0.86
CAPN12-206ENST00000597354 CREBZFQ9NS37 354 aa20.42■□□□□ 0.86
CAPN12-206ENST00000597354 ECHDC1Q9NTX5 307 aa20.42■□□□□ 0.86
CAPN12-206ENST00000597354 USP40Q9NVE5 1235 aa20.42■□□□□ 0.86
CAPN12-206ENST00000597354 ABT1Q9ULW3 272 aaKnown RBP20.42■□□□□ 0.86
CAPN12-206ENST00000597354 BTDP43251 543 aa20.41■□□□□ 0.86
CAPN12-206ENST00000597354 RASA3Q14644 834 aa20.41■□□□□ 0.86
CAPN12-206ENST00000597354 CDC42EP5Q6NZY7 148 aa20.41■□□□□ 0.86
CAPN12-206ENST00000597354 SLF2Q8IX21 1173 aa20.41■□□□□ 0.86
CAPN12-206ENST00000597354 SMC5Q8IY18 1101 aa20.41■□□□□ 0.86
CAPN12-206ENST00000597354 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.41■□□□□ 0.86
CAPN12-206ENST00000597354 LNPKQ9C0E8 428 aa20.41■□□□□ 0.86
CAPN12-206ENST00000597354 MROH7-TTC4A0A0A0MT08 1334 aa20.41■□□□□ 0.86
CAPN12-206ENST00000597354 GAKO14976 1311 aa20.4■□□□□ 0.86
CAPN12-206ENST00000597354 GSTO1P78417 241 aa20.4■□□□□ 0.86
CAPN12-206ENST00000597354 PRKG1Q13976 671 aa20.4■□□□□ 0.86
CAPN12-206ENST00000597354 NAA16Q6N069 864 aaPredicted RBP20.4■□□□□ 0.86
CAPN12-206ENST00000597354 GPATCH3Q96I76 525 aa20.4■□□□□ 0.86
CAPN12-206ENST00000597354 TMOD2Q9NZR1 351 aa20.4■□□□□ 0.86
CAPN12-206ENST00000597354 CDAN1Q8IWY9 1227 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms