RNA–Protein interactions for RNA: ENST00000596726.3

PNKP-209, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 637 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-209ENST00000596726 MAST3O60307 1309 aa26.01■■□□□ 1.75
PNKP-209ENST00000596726 PDS5AQ29RF7 1337 aaKnown RBP26.01■■□□□ 1.75
PNKP-209ENST00000596726 TNNI3KQ59H18 835 aa26.01■■□□□ 1.75
PNKP-209ENST00000596726 SIRT2Q8IXJ6 389 aa26.01■■□□□ 1.75
PNKP-209ENST00000596726 C2orf69Q8N8R5 385 aa26.01■■□□□ 1.75
PNKP-209ENST00000596726 WDR33Q9C0J8 1336 aaKnown RBP26.01■■□□□ 1.75
PNKP-209ENST00000596726 FPGT-TNNI3KV9GXZ4 949 aa26.01■■□□□ 1.75
PNKP-209ENST00000596726 CLRN2A0PK11 232 aa26■■□□□ 1.75
PNKP-209ENST00000596726 RASGRF1Q13972 1273 aa26■■□□□ 1.75
PNKP-209ENST00000596726 PRAMEF18Q5VWM3 479 aa26■■□□□ 1.75
PNKP-209ENST00000596726 SPDYE2Q495Y8 402 aa25.99■■□□□ 1.75
PNKP-209ENST00000596726 CYP4F22Q6NT55 531 aa25.99■■□□□ 1.75
PNKP-209ENST00000596726 TEKT1Q969V4 418 aa25.99■■□□□ 1.75
PNKP-209ENST00000596726 CAPNS2Q96L46 248 aa25.99■■□□□ 1.75
PNKP-209ENST00000596726 PAPPA2Q9BXP8 1791 aa25.99■■□□□ 1.75
PNKP-209ENST00000596726 ECE1P42892 770 aa25.98■■□□□ 1.75
PNKP-209ENST00000596726 HUNKP57058 714 aa25.98■■□□□ 1.75
PNKP-209ENST00000596726 HHIPL2Q6UWX4 724 aa25.98■■□□□ 1.75
PNKP-209ENST00000596726 ZDHHC15Q96MV8 337 aa25.98■■□□□ 1.75
PNKP-209ENST00000596726 DEFB129Q9H1M3 183 aa25.98■■□□□ 1.75
PNKP-209ENST00000596726 TDRD3Q9H7E2 651 aaKnown RBP25.98■■□□□ 1.75
PNKP-209ENST00000596726 ZNF70Q9UC06 446 aaPredicted RBP25.98■■□□□ 1.75
PNKP-209ENST00000596726 THSD7BQ9C0I4 1608 aa25.98■■□□□ 1.75
PNKP-209ENST00000596726 ARID4AP29374 1257 aaPredicted RBP25.97■■□□□ 1.75
PNKP-209ENST00000596726 PRDX5P30044 214 aa25.97■■□□□ 1.75
PNKP-209ENST00000596726 FKBP1BP68106 108 aa25.97■■□□□ 1.75
PNKP-209ENST00000596726 GORABQ5T7V8 394 aa25.97■■□□□ 1.75
PNKP-209ENST00000596726 EXOC6BQ9Y2D4 811 aa25.97■■□□□ 1.75
PNKP-209ENST00000596726 PPP2R3BQ9Y5P8 575 aa25.97■■□□□ 1.75
PNKP-209ENST00000596726 HMMRO75330 724 aa25.96■■□□□ 1.75
PNKP-209ENST00000596726 RRP1P56182 461 aaKnown RBP25.96■■□□□ 1.75
PNKP-209ENST00000596726 ERC1Q8IUD2 1116 aa25.96■■□□□ 1.75
PNKP-209ENST00000596726 VEZTQ9HBM0 779 aa25.96■■□□□ 1.75
PNKP-209ENST00000596726 AKAP11Q9UKA4 1901 aa25.95■■□□□ 1.74
PNKP-209ENST00000596726 LDHBP07195 334 aaKnown RBP25.95■■□□□ 1.74
PNKP-209ENST00000596726 HSP90AB4PQ58FF6 505 aa25.95■■□□□ 1.74
PNKP-209ENST00000596726 APOBEC3HQ6NTF7 200 aaKnown RBP25.95■■□□□ 1.74
PNKP-209ENST00000596726 PAXIP1Q6ZW49 1069 aaPredicted RBP25.95■■□□□ 1.74
PNKP-209ENST00000596726 ZGPATQ8N5A5 531 aaKnown RBP25.95■■□□□ 1.74
PNKP-209ENST00000596726 DBNDD2Q9BQY9 259 aa25.95■■□□□ 1.74
PNKP-209ENST00000596726 HMG20BQ9P0W2 317 aa25.95■■□□□ 1.74
PNKP-209ENST00000596726 MYH2Q9UKX2 1941 aa25.94■■□□□ 1.74
PNKP-209ENST00000596726 EAF2Q96CJ1 260 aaPredicted RBP25.94■■□□□ 1.74
PNKP-209ENST00000596726 UQCRFS1P1P0C7P4 283 aa25.93■■□□□ 1.74
PNKP-209ENST00000596726 RGMBQ6NW40 437 aa25.93■■□□□ 1.74
PNKP-209ENST00000596726 NF2P35240 595 aa25.92■■□□□ 1.74
PNKP-209ENST00000596726 MCAMP43121 646 aa25.92■■□□□ 1.74
PNKP-209ENST00000596726 TNFAIP1Q13829 316 aa25.92■■□□□ 1.74
PNKP-209ENST00000596726 RASA3Q14644 834 aa25.92■■□□□ 1.74
PNKP-209ENST00000596726 SPATA5Q8NB90 893 aa25.92■■□□□ 1.74
PNKP-209ENST00000596726 DBNLQ9UJU6 430 aaKnown RBP25.92■■□□□ 1.74
PNKP-209ENST00000596726 HSPA1AP0DMV8 641 aaKnown RBP25.91■■□□□ 1.74
PNKP-209ENST00000596726 HSPA1BP0DMV9 641 aaKnown RBP25.91■■□□□ 1.74
PNKP-209ENST00000596726 DIXDC1Q155Q3 683 aa25.91■■□□□ 1.74
PNKP-209ENST00000596726 CCDC158Q5M9N0 1113 aa25.91■■□□□ 1.74
PNKP-209ENST00000596726 PI16Q6UXB8 463 aa25.91■■□□□ 1.74
PNKP-209ENST00000596726 MOB2Q70IA6 237 aa25.91■■□□□ 1.74
PNKP-209ENST00000596726 RHPN1Q8TCX5 695 aa25.91■■□□□ 1.74
PNKP-209ENST00000596726 ZNF512BQ96KM6 892 aaPredicted RBP25.91■■□□□ 1.74
PNKP-209ENST00000596726 DAGLAQ9Y4D2 1042 aa25.91■■□□□ 1.74
PNKP-209ENST00000596726 MAP2K2P36507 400 aa25.9■■□□□ 1.74
PNKP-209ENST00000596726 GRM1Q13255 1194 aa25.9■■□□□ 1.74
PNKP-209ENST00000596726 SPTY2D1Q68D10 685 aaPredicted RBP25.9■■□□□ 1.74
PNKP-209ENST00000596726 CCDC8Q9H0W5 538 aaPredicted RBP25.9■■□□□ 1.74
PNKP-209ENST00000596726 TLR7Q9NYK1 1049 aaKnown RBP25.9■■□□□ 1.74
PNKP-209ENST00000596726 ABCF2Q9UG63 623 aa25.9■■□□□ 1.74
PNKP-209ENST00000596726 SSC5DA1L4H1 1573 aa25.9■■□□□ 1.74
PNKP-209ENST00000596726 FAM155AB1AL88 458 aaPredicted RBP25.89■■□□□ 1.74
PNKP-209ENST00000596726 AOC2O75106 756 aa25.89■■□□□ 1.74
PNKP-209ENST00000596726 TTC39AQ5SRH9 613 aa25.89■■□□□ 1.74
PNKP-209ENST00000596726 FKBP1CQ5VVH2 108 aa25.89■■□□□ 1.74
PNKP-209ENST00000596726 TCP10L2B9ZVM9 353 aa25.88■■□□□ 1.73
PNKP-209ENST00000596726 UBE2Q2LH0YL09 131 aa25.88■■□□□ 1.73
PNKP-209ENST00000596726 RAB11FIP3O75154 756 aa25.88■■□□□ 1.73
PNKP-209ENST00000596726 SUPT20HL1Q3ZLR7 823 aa25.88■■□□□ 1.73
PNKP-209ENST00000596726 NBPF12Q5TAG4 269 aaPredicted RBP25.88■■□□□ 1.73
PNKP-209ENST00000596726 CCDC102AQ96A19 550 aa25.88■■□□□ 1.73
PNKP-209ENST00000596726 KIF1BPQ96EK5 621 aa25.88■■□□□ 1.73
PNKP-209ENST00000596726 FAM163AQ96GL9 167 aaPredicted RBP25.88■■□□□ 1.73
PNKP-209ENST00000596726 TEPSINQ96N21 525 aa25.88■■□□□ 1.73
PNKP-209ENST00000596726 WBP1LQ9NX94 342 aa25.88■■□□□ 1.73
PNKP-209ENST00000596726 GAKO14976 1311 aa25.88■■□□□ 1.73
PNKP-209ENST00000596726 TNNI2P48788 182 aa25.87■■□□□ 1.73
PNKP-209ENST00000596726 ZNF157P51786 506 aaPredicted RBP25.87■■□□□ 1.73
PNKP-209ENST00000596726 ERICH6Q7L0X2 663 aa25.87■■□□□ 1.73
PNKP-209ENST00000596726 IL1RAPL2Q9NP60 686 aa25.87■■□□□ 1.73
PNKP-209ENST00000596726 MYO5AQ9Y4I1 1855 aaKnown RBP25.86■■□□□ 1.73
PNKP-209ENST00000596726 SLC10A3P09131 477 aa25.86■■□□□ 1.73
PNKP-209ENST00000596726 CACNB3P54284 484 aa25.86■■□□□ 1.73
PNKP-209ENST00000596726 MAP2K1Q02750 393 aaPredicted RBP25.86■■□□□ 1.73
PNKP-209ENST00000596726 NOGQ13253 232 aa25.86■■□□□ 1.73
PNKP-209ENST00000596726 TTLL12Q14166 644 aaPredicted RBP25.86■■□□□ 1.73
PNKP-209ENST00000596726 MAP3K11Q16584 847 aa25.86■■□□□ 1.73
PNKP-209ENST00000596726 CDC42EP5Q6NZY7 148 aa25.86■■□□□ 1.73
PNKP-209ENST00000596726 TBC1D9Q6ZT07 1266 aa25.86■■□□□ 1.73
PNKP-209ENST00000596726 ARMC9Q7Z3E5 817 aa25.86■■□□□ 1.73
PNKP-209ENST00000596726 FAM83AQ86UY5 434 aa25.86■■□□□ 1.73
PNKP-209ENST00000596726 DZIP1Q86YF9 867 aaKnown RBP25.86■■□□□ 1.73
PNKP-209ENST00000596726 ZNF384Q8TF68 577 aa25.86■■□□□ 1.73
PNKP-209ENST00000596726 TMOD2Q9NZR1 351 aa25.86■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms