RNA–Protein interactions for RNA: ENST00000596399.1

LIM2-202, Transcript of lens intrinsic membrane protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIM2, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2-202ENST00000596399 IREB2P48200 963 aaKnown RBP20.23■□□□□ 0.83
LIM2-202ENST00000596399 CACNB3P54284 484 aa20.23■□□□□ 0.83
LIM2-202ENST00000596399 PKN2Q16513 984 aaKnown RBP20.23■□□□□ 0.83
LIM2-202ENST00000596399 ARAP2Q8WZ64 1704 aa20.23■□□□□ 0.83
LIM2-202ENST00000596399 ELP3Q9H9T3 547 aa20.23■□□□□ 0.83
LIM2-202ENST00000596399 E9PSI1 815 aa20.22■□□□□ 0.83
LIM2-202ENST00000596399 PDE8BO95263 885 aa20.22■□□□□ 0.83
LIM2-202ENST00000596399 SLFN5Q08AF3 891 aa20.22■□□□□ 0.83
LIM2-202ENST00000596399 CNKSR2Q8WXI2 1034 aa20.22■□□□□ 0.83
LIM2-202ENST00000596399 PTPN18Q99952 460 aa20.22■□□□□ 0.83
LIM2-202ENST00000596399 OTOFQ9HC10 1997 aa20.22■□□□□ 0.83
LIM2-202ENST00000596399 PTPRCP08575 1304 aa20.22■□□□□ 0.83
LIM2-202ENST00000596399 HTTP42858 3142 aa20.22■□□□□ 0.83
LIM2-202ENST00000596399 FRAT2O75474 233 aaPredicted RBP20.21■□□□□ 0.83
LIM2-202ENST00000596399 ALDH1A1P00352 501 aa20.21■□□□□ 0.83
LIM2-202ENST00000596399 INHBEP58166 350 aa20.21■□□□□ 0.83
LIM2-202ENST00000596399 ANKRD13AQ8IZ07 590 aa20.21■□□□□ 0.83
LIM2-202ENST00000596399 TNFAIP1Q13829 316 aa20.2■□□□□ 0.82
LIM2-202ENST00000596399 CAVIN4Q5BKX8 364 aa20.2■□□□□ 0.82
LIM2-202ENST00000596399 FBXO46Q6PJ61 603 aaPredicted RBP20.2■□□□□ 0.82
LIM2-202ENST00000596399 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.2■□□□□ 0.82
LIM2-202ENST00000596399 OPTNQ96CV9 577 aa20.2■□□□□ 0.82
LIM2-202ENST00000596399 UNCXA6NJT0 531 aa20.19■□□□□ 0.82
LIM2-202ENST00000596399 RFX5P48382 616 aaPredicted RBP20.19■□□□□ 0.82
LIM2-202ENST00000596399 CRHR2Q13324 411 aa20.19■□□□□ 0.82
LIM2-202ENST00000596399 LAMB1P07942 1786 aa20.18■□□□□ 0.82
LIM2-202ENST00000596399 FGFR2P21802 821 aa20.18■□□□□ 0.82
LIM2-202ENST00000596399 CAP1Q01518 475 aa20.18■□□□□ 0.82
LIM2-202ENST00000596399 TRIM17Q9Y577 477 aa20.18■□□□□ 0.82
LIM2-202ENST00000596399 SLC34A2O95436 690 aa20.17■□□□□ 0.82
LIM2-202ENST00000596399 VGLL4Q14135 290 aa20.17■□□□□ 0.82
LIM2-202ENST00000596399 OTOP1Q7RTM1 612 aa20.17■□□□□ 0.82
LIM2-202ENST00000596399 CD99L2Q8TCZ2 262 aa20.17■□□□□ 0.82
LIM2-202ENST00000596399 CENPFP49454 3210 aa20.17■□□□□ 0.82
LIM2-202ENST00000596399 PUM3Q15397 648 aaKnown RBP20.16■□□□□ 0.82
LIM2-202ENST00000596399 APOBEC3HQ6NTF7 200 aaKnown RBP20.16■□□□□ 0.82
LIM2-202ENST00000596399 TBC1D22AQ8WUA7 517 aa20.16■□□□□ 0.82
LIM2-202ENST00000596399 TEKT1Q969V4 418 aa20.16■□□□□ 0.82
LIM2-202ENST00000596399 MS4A4AQ96JQ5 239 aa20.16■□□□□ 0.82
LIM2-202ENST00000596399 SMC4Q9NTJ3 1288 aa20.16■□□□□ 0.82
LIM2-202ENST00000596399 TESPA1A2RU30 521 aaPredicted RBP20.15■□□□□ 0.82
LIM2-202ENST00000596399 EYA2O00167 538 aa20.15■□□□□ 0.82
LIM2-202ENST00000596399 TNNI2P48788 182 aa20.15■□□□□ 0.82
LIM2-202ENST00000596399 ATG9AQ7Z3C6 839 aa20.15■□□□□ 0.82
LIM2-202ENST00000596399 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.15■□□□□ 0.82
LIM2-202ENST00000596399 SIL1Q9H173 461 aa20.15■□□□□ 0.82
LIM2-202ENST00000596399 IFIT1P09914 478 aaKnown RBP20.14■□□□□ 0.81
LIM2-202ENST00000596399 MAP3K9P80192 1104 aa20.14■□□□□ 0.81
LIM2-202ENST00000596399 HDLBPQ00341 1268 aaKnown RBP20.14■□□□□ 0.81
LIM2-202ENST00000596399 BRI3BPQ8WY22 251 aa20.14■□□□□ 0.81
LIM2-202ENST00000596399 OTUD5Q96G74 571 aa20.14■□□□□ 0.81
LIM2-202ENST00000596399 ZDHHC15Q96MV8 337 aa20.14■□□□□ 0.81
LIM2-202ENST00000596399 PDE4DIPQ5VU43 2346 aa20.13■□□□□ 0.81
LIM2-202ENST00000596399 ALDH1L2Q3SY69 923 aa20.13■□□□□ 0.81
LIM2-202ENST00000596399 TRMT2AQ8IZ69 625 aaKnown RBP20.13■□□□□ 0.81
LIM2-202ENST00000596399 ZKSCAN4Q969J2 545 aaPredicted RBP20.13■□□□□ 0.81
LIM2-202ENST00000596399 NOB1Q9ULX3 412 aaKnown RBP20.13■□□□□ 0.81
LIM2-202ENST00000596399 OTUD7BQ6GQQ9 843 aa20.12■□□□□ 0.81
LIM2-202ENST00000596399 KIF16BQ96L93 1317 aa20.11■□□□□ 0.81
LIM2-202ENST00000596399 CCL15-CCL14A0A0B4J2E2 113 aa20.11■□□□□ 0.81
LIM2-202ENST00000596399 SLC5A1P13866 664 aa20.11■□□□□ 0.81
LIM2-202ENST00000596399 DIXDC1Q155Q3 683 aa20.11■□□□□ 0.81
LIM2-202ENST00000596399 CCL15Q16663 113 aa20.11■□□□□ 0.81
LIM2-202ENST00000596399 FAM43AQ8N2R8 423 aa20.11■□□□□ 0.81
LIM2-202ENST00000596399 LPIN2Q92539 896 aa20.11■□□□□ 0.81
LIM2-202ENST00000596399 CSADQ9Y600 493 aa20.11■□□□□ 0.81
LIM2-202ENST00000596399 SNCAIPQ9Y6H5 919 aa20.11■□□□□ 0.81
LIM2-202ENST00000596399 POTEFA5A3E0 1075 aa20.1■□□□□ 0.81
LIM2-202ENST00000596399 SP3Q02447 781 aa20.1■□□□□ 0.81
LIM2-202ENST00000596399 MIGA2Q7L4E1 593 aa20.1■□□□□ 0.81
LIM2-202ENST00000596399 ERO1AQ96HE7 468 aa20.1■□□□□ 0.81
LIM2-202ENST00000596399 WRNIP1Q96S55 665 aa20.1■□□□□ 0.81
LIM2-202ENST00000596399 MRIQ9BWK5 157 aa20.1■□□□□ 0.81
LIM2-202ENST00000596399 PA2G4Q9UQ80 394 aaKnown RBP20.1■□□□□ 0.81
LIM2-202ENST00000596399 PTPN22Q9Y2R2 807 aa20.1■□□□□ 0.81
LIM2-202ENST00000596399 BRCA2P51587 3418 aa20.09■□□□□ 0.81
LIM2-202ENST00000596399 UBTFL1P0CB47 393 aaPredicted RBP20.09■□□□□ 0.81
LIM2-202ENST00000596399 GTF2A2P52657 109 aa20.09■□□□□ 0.81
LIM2-202ENST00000596399 HHIPL2Q6UWX4 724 aa20.09■□□□□ 0.81
LIM2-202ENST00000596399 EFCC1Q9HA90 598 aa20.09■□□□□ 0.81
LIM2-202ENST00000596399 TMOD2Q9NZR1 351 aa20.09■□□□□ 0.81
LIM2-202ENST00000596399 LRRFIP2Q9Y608 721 aaKnown RBP20.09■□□□□ 0.81
LIM2-202ENST00000596399 MKI67P46013 3256 aaKnown RBP20.09■□□□□ 0.81
LIM2-202ENST00000596399 SPDYE5A6NIY4 337 aa20.08■□□□□ 0.81
LIM2-202ENST00000596399 PRDX5P30044 214 aa20.08■□□□□ 0.81
LIM2-202ENST00000596399 TAF1CQ15572 869 aaPredicted RBP20.08■□□□□ 0.81
LIM2-202ENST00000596399 ATP2B3Q16720 1220 aa20.08■□□□□ 0.81
LIM2-202ENST00000596399 FAM83AQ86UY5 434 aa20.08■□□□□ 0.81
LIM2-202ENST00000596399 SUGT1Q9Y2Z0 365 aa20.08■□□□□ 0.81
LIM2-202ENST00000596399 DAGLAQ9Y4D2 1042 aa20.08■□□□□ 0.81
LIM2-202ENST00000596399 MAST3O60307 1309 aa20.07■□□□□ 0.8
LIM2-202ENST00000596399 IRF6O14896 467 aa20.07■□□□□ 0.8
LIM2-202ENST00000596399 TCP10Q12799 353 aa20.07■□□□□ 0.8
LIM2-202ENST00000596399 NFIAQ12857 509 aa20.07■□□□□ 0.8
LIM2-202ENST00000596399 WDR66Q8TBY9 1149 aa20.07■□□□□ 0.8
LIM2-202ENST00000596399 MEIS3Q99687 375 aa20.07■□□□□ 0.8
LIM2-202ENST00000596399 MYH13Q9UKX3 1938 aa20.07■□□□□ 0.8
LIM2-202ENST00000596399 ADORA1P30542 326 aa20.06■□□□□ 0.8
LIM2-202ENST00000596399 INPP5BP32019 993 aa20.06■□□□□ 0.8
LIM2-202ENST00000596399 PHKA1P46020 1223 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms