RNA–Protein interactions for RNA: ENST00000594724.5

USE1-205, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 3

Gene USE1, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-205ENST00000594724 XAGE2Q96GT9 111 aa18.27■□□□□ 0.52
USE1-205ENST00000594724 NEUROD6Q96NK8 337 aa18.27■□□□□ 0.52
USE1-205ENST00000594724 ZNF70Q9UC06 446 aaPredicted RBP18.27■□□□□ 0.52
USE1-205ENST00000594724 COL1A1P02452 1464 aaPredicted RBP18.26■□□□□ 0.51
USE1-205ENST00000594724 FAM155AB1AL88 458 aaPredicted RBP18.26■□□□□ 0.51
USE1-205ENST00000594724 NF2P35240 595 aa18.26■□□□□ 0.51
USE1-205ENST00000594724 FKBP1BP68106 108 aa18.26■□□□□ 0.51
USE1-205ENST00000594724 FZD1Q9UP38 647 aa18.26■□□□□ 0.51
USE1-205ENST00000594724 MS4A1P11836 297 aa18.25■□□□□ 0.51
USE1-205ENST00000594724 HDLBPQ00341 1268 aaKnown RBP18.25■□□□□ 0.51
USE1-205ENST00000594724 NOGQ13253 232 aa18.25■□□□□ 0.51
USE1-205ENST00000594724 SPDYE2Q495Y8 402 aa18.25■□□□□ 0.51
USE1-205ENST00000594724 TEKT1Q969V4 418 aa18.25■□□□□ 0.51
USE1-205ENST00000594724 CCDC102AQ96A19 550 aa18.25■□□□□ 0.51
USE1-205ENST00000594724 DENND2AQ9ULE3 1009 aa18.25■□□□□ 0.51
USE1-205ENST00000594724 SUGT1Q9Y2Z0 365 aa18.25■□□□□ 0.51
USE1-205ENST00000594724 ARAP2Q8WZ64 1704 aa18.25■□□□□ 0.51
USE1-205ENST00000594724 TCP10L2B9ZVM9 353 aa18.24■□□□□ 0.51
USE1-205ENST00000594724 SURF6O75683 361 aaKnown RBP18.24■□□□□ 0.51
USE1-205ENST00000594724 CTCFP49711 727 aaPredicted RBP18.24■□□□□ 0.51
USE1-205ENST00000594724 RASA3Q14644 834 aa18.24■□□□□ 0.51
USE1-205ENST00000594724 BEGAINQ9BUH8 593 aa18.24■□□□□ 0.51
USE1-205ENST00000594724 COG6Q9Y2V7 657 aa18.24■□□□□ 0.51
USE1-205ENST00000594724 THSD7BQ9C0I4 1608 aa18.23■□□□□ 0.51
USE1-205ENST00000594724 PAPPA2Q9BXP8 1791 aa18.23■□□□□ 0.51
USE1-205ENST00000594724 SEMA3EO15041 775 aa18.23■□□□□ 0.51
USE1-205ENST00000594724 SLC10A3P09131 477 aa18.23■□□□□ 0.51
USE1-205ENST00000594724 PRDX5P30044 214 aa18.23■□□□□ 0.51
USE1-205ENST00000594724 OS9Q13438 667 aaPredicted RBP18.23■□□□□ 0.51
USE1-205ENST00000594724 NBPF12Q5TAG4 269 aaPredicted RBP18.23■□□□□ 0.51
USE1-205ENST00000594724 CEP85Q6P2H3 762 aa18.23■□□□□ 0.51
USE1-205ENST00000594724 MRIQ9BWK5 157 aa18.23■□□□□ 0.51
USE1-205ENST00000594724 MAST3O60307 1309 aa18.23■□□□□ 0.51
USE1-205ENST00000594724 ECM29Q5VYK3 1845 aa18.22■□□□□ 0.51
USE1-205ENST00000594724 LBX1P52954 281 aa18.22■□□□□ 0.51
USE1-205ENST00000594724 KIF23Q02241 960 aaPredicted RBP18.22■□□□□ 0.51
USE1-205ENST00000594724 RASGRF1Q13972 1273 aa18.22■□□□□ 0.51
USE1-205ENST00000594724 MVPQ14764 893 aaKnown RBP18.22■□□□□ 0.51
USE1-205ENST00000594724 GORABQ5T7V8 394 aa18.22■□□□□ 0.51
USE1-205ENST00000594724 APOBEC3HQ6NTF7 200 aaKnown RBP18.22■□□□□ 0.51
USE1-205ENST00000594724 HHIPL2Q6UWX4 724 aa18.22■□□□□ 0.51
USE1-205ENST00000594724 ARMC9Q7Z3E5 817 aa18.22■□□□□ 0.51
USE1-205ENST00000594724 RASAL3Q86YV0 1011 aa18.22■□□□□ 0.51
USE1-205ENST00000594724 ZDHHC15Q96MV8 337 aa18.22■□□□□ 0.51
USE1-205ENST00000594724 TSKSQ9UJT2 592 aa18.22■□□□□ 0.51
USE1-205ENST00000594724 ANGEL1Q9UNK9 670 aaKnown RBP18.22■□□□□ 0.51
USE1-205ENST00000594724 PPP2R3BQ9Y5P8 575 aa18.22■□□□□ 0.51
USE1-205ENST00000594724 LDHBP07195 334 aaKnown RBP18.21■□□□□ 0.51
USE1-205ENST00000594724 HSPA8P11142 646 aaKnown RBP18.21■□□□□ 0.51
USE1-205ENST00000594724 CACNB3P54284 484 aa18.21■□□□□ 0.51
USE1-205ENST00000594724 TNFAIP1Q13829 316 aa18.21■□□□□ 0.51
USE1-205ENST00000594724 DIXDC1Q155Q3 683 aa18.21■□□□□ 0.51
USE1-205ENST00000594724 SUPT20HL1Q3ZLR7 823 aa18.21■□□□□ 0.51
USE1-205ENST00000594724 C20orf194Q5TEA3 1177 aa18.21■□□□□ 0.51
USE1-205ENST00000594724 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.21■□□□□ 0.51
USE1-205ENST00000594724 MYH13Q9UKX3 1938 aa18.2■□□□□ 0.5
USE1-205ENST00000594724 CDAN1Q8IWY9 1227 aa18.2■□□□□ 0.5
USE1-205ENST00000594724 TMEM39BQ9GZU3 492 aa18.2■□□□□ 0.5
USE1-205ENST00000594724 NOP58Q9Y2X3 529 aaKnown RBP18.2■□□□□ 0.5
USE1-205ENST00000594724 SALL1Q9NSC2 1324 aa18.2■□□□□ 0.5
USE1-205ENST00000594724 SSC5DA1L4H1 1573 aa18.19■□□□□ 0.5
USE1-205ENST00000594724 ZBTB22O15209 634 aa18.19■□□□□ 0.5
USE1-205ENST00000594724 TNNI3KQ59H18 835 aa18.19■□□□□ 0.5
USE1-205ENST00000594724 LDLRAD1Q5T700 205 aa18.19■□□□□ 0.5
USE1-205ENST00000594724 PI16Q6UXB8 463 aa18.19■□□□□ 0.5
USE1-205ENST00000594724 YTHDC1Q96MU7 727 aaKnown RBP18.19■□□□□ 0.5
USE1-205ENST00000594724 ABCF2Q9UG63 623 aa18.19■□□□□ 0.5
USE1-205ENST00000594724 DDX19BQ9UMR2 479 aa18.19■□□□□ 0.5
USE1-205ENST00000594724 DAGLAQ9Y4D2 1042 aa18.19■□□□□ 0.5
USE1-205ENST00000594724 FPGT-TNNI3KV9GXZ4 949 aa18.19■□□□□ 0.5
USE1-205ENST00000594724 PPP1R12BO60237 982 aaPredicted RBP18.18■□□□□ 0.5
USE1-205ENST00000594724 TNNI2P48788 182 aa18.18■□□□□ 0.5
USE1-205ENST00000594724 MKRN3Q13064 507 aaKnown RBP18.18■□□□□ 0.5
USE1-205ENST00000594724 TEPSINQ96N21 525 aa18.18■□□□□ 0.5
USE1-205ENST00000594724 CSRNP1Q96S65 589 aa18.18■□□□□ 0.5
USE1-205ENST00000594724 GPR108Q9NPR9 543 aa18.18■□□□□ 0.5
USE1-205ENST00000594724 PRDM10Q9NQV6 1147 aa18.18■□□□□ 0.5
USE1-205ENST00000594724 ZBTB40Q9NUA8 1239 aa18.18■□□□□ 0.5
USE1-205ENST00000594724 TMOD2Q9NZR1 351 aa18.18■□□□□ 0.5
USE1-205ENST00000594724 HMG20BQ9P0W2 317 aa18.18■□□□□ 0.5
USE1-205ENST00000594724 USP2O75604 605 aaPredicted RBP18.17■□□□□ 0.5
USE1-205ENST00000594724 MAP3K11Q16584 847 aa18.17■□□□□ 0.5
USE1-205ENST00000594724 ZGPATQ8N5A5 531 aaKnown RBP18.17■□□□□ 0.5
USE1-205ENST00000594724 DBNDD2Q9BQY9 259 aa18.17■□□□□ 0.5
USE1-205ENST00000594724 EXOC6BQ9Y2D4 811 aa18.17■□□□□ 0.5
USE1-205ENST00000594724 PDS5AQ29RF7 1337 aaKnown RBP18.17■□□□□ 0.5
USE1-205ENST00000594724 ARID4AP29374 1257 aaPredicted RBP18.16■□□□□ 0.5
USE1-205ENST00000594724 CDC42EP5Q6NZY7 148 aa18.16■□□□□ 0.5
USE1-205ENST00000594724 TBC1D9Q6ZT07 1266 aa18.16■□□□□ 0.5
USE1-205ENST00000594724 TNS4Q8IZW8 715 aa18.16■□□□□ 0.5
USE1-205ENST00000594724 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.16■□□□□ 0.5
USE1-205ENST00000594724 SPATA5Q8NB90 893 aa18.16■□□□□ 0.5
USE1-205ENST00000594724 SLC10A4Q96EP9 437 aa18.16■□□□□ 0.5
USE1-205ENST00000594724 CLMNQ96JQ2 1002 aa18.16■□□□□ 0.5
USE1-205ENST00000594724 CCDC8Q9H0W5 538 aaPredicted RBP18.16■□□□□ 0.5
USE1-205ENST00000594724 MCAMP43121 646 aa18.15■□□□□ 0.5
USE1-205ENST00000594724 PDE3AQ14432 1141 aa18.15■□□□□ 0.5
USE1-205ENST00000594724 TTC39AQ5SRH9 613 aa18.15■□□□□ 0.5
USE1-205ENST00000594724 SPTY2D1Q68D10 685 aaPredicted RBP18.15■□□□□ 0.5
USE1-205ENST00000594724 DZIP1Q86YF9 867 aaKnown RBP18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms