RNA–Protein interactions for RNA: ENST00000594399.1

USE1-204, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2

Gene USE1, Length 613 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-204ENST00000594399 KIF3CO14782 793 aa13.11□□□□□ -0.31
USE1-204ENST00000594399 ZFYP08048 801 aaPredicted RBP13.11□□□□□ -0.31
USE1-204ENST00000594399 VIL1P09327 827 aaKnown RBP13.11□□□□□ -0.31
USE1-204ENST00000594399 CXCL9Q07325 125 aa13.11□□□□□ -0.31
USE1-204ENST00000594399 RSBN1LQ6PCB5 846 aaPredicted RBP13.11□□□□□ -0.31
USE1-204ENST00000594399 TMED8Q6PL24 325 aaPredicted RBP13.11□□□□□ -0.31
USE1-204ENST00000594399 MXD3Q9BW11 206 aa13.11□□□□□ -0.31
USE1-204ENST00000594399 DIAPH3Q9NSV4 1193 aa13.11□□□□□ -0.31
USE1-204ENST00000594399 PDE6AP16499 860 aa13.1□□□□□ -0.31
USE1-204ENST00000594399 ADD2P35612 726 aa13.1□□□□□ -0.31
USE1-204ENST00000594399 SLC9C2Q5TAH2 1124 aa13.1□□□□□ -0.31
USE1-204ENST00000594399 CASC1Q6TDU7 716 aa13.1□□□□□ -0.31
USE1-204ENST00000594399 MAGEB6Q8N7X4 407 aa13.1□□□□□ -0.31
USE1-204ENST00000594399 NSUN4Q96CB9 384 aaKnown RBP13.1□□□□□ -0.31
USE1-204ENST00000594399 NMRK2Q9NPI5 230 aa13.1□□□□□ -0.31
USE1-204ENST00000594399 RNF113AO15541 343 aaKnown RBP13.09□□□□□ -0.31
USE1-204ENST00000594399 RPS12P25398 132 aaKnown RBP13.09□□□□□ -0.31
USE1-204ENST00000594399 CHMLP26374 656 aa13.09□□□□□ -0.31
USE1-204ENST00000594399 GSTO1P78417 241 aa13.09□□□□□ -0.31
USE1-204ENST00000594399 MECOMQ03112 1051 aa13.09□□□□□ -0.31
USE1-204ENST00000594399 UBE3CQ15386 1083 aa13.09□□□□□ -0.31
USE1-204ENST00000594399 GRIK5Q16478 980 aa13.09□□□□□ -0.31
USE1-204ENST00000594399 NAA16Q6N069 864 aaPredicted RBP13.09□□□□□ -0.31
USE1-204ENST00000594399 DPY19L2Q6NUT2 758 aa13.09□□□□□ -0.31
USE1-204ENST00000594399 AGBL3Q8NEM8 1001 aa13.09□□□□□ -0.31
USE1-204ENST00000594399 ZNF532Q9HCE3 1301 aa13.09□□□□□ -0.31
USE1-204ENST00000594399 ADAMTSL1Q8N6G6 1762 aa13.08□□□□□ -0.32
USE1-204ENST00000594399 TCRBV5S4A2TA0A5A2 114 aa13.08□□□□□ -0.32
USE1-204ENST00000594399 GLTPD2A6NH11 291 aa13.08□□□□□ -0.32
USE1-204ENST00000594399 F8W031 263 aaPredicted RBP13.08□□□□□ -0.32
USE1-204ENST00000594399 TOMM70O94826 608 aa13.08□□□□□ -0.32
USE1-204ENST00000594399 KIAA0825Q8IV33 1275 aa13.08□□□□□ -0.32
USE1-204ENST00000594399 SLF2Q8IX21 1173 aa13.08□□□□□ -0.32
USE1-204ENST00000594399 GPC2Q8N158 579 aa13.08□□□□□ -0.32
USE1-204ENST00000594399 APPBP2Q92624 585 aa13.08□□□□□ -0.32
USE1-204ENST00000594399 TTF2Q9UNY4 1162 aaKnown RBP13.08□□□□□ -0.32
USE1-204ENST00000594399 GJA3Q9Y6H8 435 aa13.08□□□□□ -0.32
USE1-204ENST00000594399 RAD50Q92878 1312 aa13.08□□□□□ -0.32
USE1-204ENST00000594399 CHGBP05060 677 aa13.07□□□□□ -0.32
USE1-204ENST00000594399 CYP7A1P22680 504 aa13.07□□□□□ -0.32
USE1-204ENST00000594399 NMIQ13287 307 aaPredicted RBP13.07□□□□□ -0.32
USE1-204ENST00000594399 DIXDC1Q155Q3 683 aa13.07□□□□□ -0.32
USE1-204ENST00000594399 ZMYM1Q5SVZ6 1142 aa13.07□□□□□ -0.32
USE1-204ENST00000594399 ZNF384Q8TF68 577 aa13.07□□□□□ -0.32
USE1-204ENST00000594399 RUFY2Q8WXA3 655 aa13.07□□□□□ -0.32
USE1-204ENST00000594399 FAM227BQ96M60 508 aa13.07□□□□□ -0.32
USE1-204ENST00000594399 GMLQ99445 158 aa13.07□□□□□ -0.32
USE1-204ENST00000594399 RRAGCQ9HB90 399 aa13.07□□□□□ -0.32
USE1-204ENST00000594399 ZBTB12Q9Y330 459 aaPredicted RBP13.07□□□□□ -0.32
USE1-204ENST00000594399 MROH7-TTC4A0A0A0MT08 1334 aa13.07□□□□□ -0.32
USE1-204ENST00000594399 MYH2Q9UKX2 1941 aa13.06□□□□□ -0.32
USE1-204ENST00000594399 A0A0D9SFI3 127 aa13.06□□□□□ -0.32
USE1-204ENST00000594399 LDHCP07864 332 aa13.06□□□□□ -0.32
USE1-204ENST00000594399 GMPSP49915 693 aaPredicted RBP13.06□□□□□ -0.32
USE1-204ENST00000594399 SLFNL1Q499Z3 407 aa13.06□□□□□ -0.32
USE1-204ENST00000594399 CWC27Q6UX04 472 aaKnown RBP13.06□□□□□ -0.32
USE1-204ENST00000594399 OGFOD1Q8N543 542 aa13.06□□□□□ -0.32
USE1-204ENST00000594399 RBM46Q8TBY0 533 aaKnown RBP13.06□□□□□ -0.32
USE1-204ENST00000594399 TEKT1Q969V4 418 aa13.06□□□□□ -0.32
USE1-204ENST00000594399 HELLSQ9NRZ9 838 aa13.06□□□□□ -0.32
USE1-204ENST00000594399 HDAC9Q9UKV0 1011 aa13.06□□□□□ -0.32
USE1-204ENST00000594399 GAKO14976 1311 aa13.06□□□□□ -0.32
USE1-204ENST00000594399 M0R2C6 588 aa13.05□□□□□ -0.32
USE1-204ENST00000594399 USP17L8P0C7I0 530 aa13.05□□□□□ -0.32
USE1-204ENST00000594399 VEGFAP15692 232 aaPredicted RBP13.05□□□□□ -0.32
USE1-204ENST00000594399 HSPA6P17066 643 aa13.05□□□□□ -0.32
USE1-204ENST00000594399 CRKP46108 304 aa13.05□□□□□ -0.32
USE1-204ENST00000594399 MMP14P50281 582 aa13.05□□□□□ -0.32
USE1-204ENST00000594399 SCNN1DP51172 638 aa13.05□□□□□ -0.32
USE1-204ENST00000594399 HDLBPQ00341 1268 aaKnown RBP13.05□□□□□ -0.32
USE1-204ENST00000594399 C8orf34Q49A92 452 aa13.05□□□□□ -0.32
USE1-204ENST00000594399 MCMDC2Q4G0Z9 681 aa13.05□□□□□ -0.32
USE1-204ENST00000594399 ADGRA1Q86SQ6 560 aa13.05□□□□□ -0.32
USE1-204ENST00000594399 DPF2Q92785 391 aa13.05□□□□□ -0.32
USE1-204ENST00000594399 NOL10Q9BSC4 688 aaKnown RBP13.05□□□□□ -0.32
USE1-204ENST00000594399 ESYT1Q9BSJ8 1104 aa13.05□□□□□ -0.32
USE1-204ENST00000594399 SERPINA10Q9UK55 444 aa13.05□□□□□ -0.32
USE1-204ENST00000594399 MAGEB6P1A0A0J9YX57 407 aa13.04□□□□□ -0.32
USE1-204ENST00000594399 SGSM2O43147 1006 aa13.04□□□□□ -0.32
USE1-204ENST00000594399 HHIPL2Q6UWX4 724 aa13.04□□□□□ -0.32
USE1-204ENST00000594399 CERS3Q8IU89 383 aa13.04□□□□□ -0.32
USE1-204ENST00000594399 MIGA1Q8NAN2 632 aa13.04□□□□□ -0.32
USE1-204ENST00000594399 OSBP2Q969R2 916 aa13.04□□□□□ -0.32
USE1-204ENST00000594399 AIDAQ96BJ3 306 aa13.04□□□□□ -0.32
USE1-204ENST00000594399 FAM163AQ96GL9 167 aaPredicted RBP13.04□□□□□ -0.32
USE1-204ENST00000594399 MRIQ9BWK5 157 aa13.04□□□□□ -0.32
USE1-204ENST00000594399 PUS7LQ9H0K6 701 aaKnown RBP13.04□□□□□ -0.32
USE1-204ENST00000594399 DAGLAQ9Y4D2 1042 aa13.04□□□□□ -0.32
USE1-204ENST00000594399 CCDC171Q6TFL3 1326 aa13.04□□□□□ -0.32
USE1-204ENST00000594399 GPAA1O43292 621 aa13.03□□□□□ -0.32
USE1-204ENST00000594399 DDNO94850 711 aaPredicted RBP13.03□□□□□ -0.32
USE1-204ENST00000594399 MBD4O95243 580 aa13.03□□□□□ -0.32
USE1-204ENST00000594399 BAG3O95817 575 aa13.03□□□□□ -0.32
USE1-204ENST00000594399 BTDP43251 543 aa13.03□□□□□ -0.32
USE1-204ENST00000594399 MFAP1P55081 439 aaKnown RBP13.03□□□□□ -0.32
USE1-204ENST00000594399 CFAP100Q494V2 611 aa13.03□□□□□ -0.32
USE1-204ENST00000594399 MICALL2Q8IY33 904 aa13.03□□□□□ -0.32
USE1-204ENST00000594399 ZDHHC15Q96MV8 337 aa13.03□□□□□ -0.32
USE1-204ENST00000594399 SEC62Q99442 399 aaKnown RBP13.03□□□□□ -0.32
USE1-204ENST00000594399 AATFQ9NY61 560 aaKnown RBP eCLIP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms