RNA–Protein interactions for RNA: ENST00000594092.5

VRK3-207, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK3, Length 1,831 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-207ENST00000594092 DOK7Q18PE1 504 aa18.14■□□□□ 0.5
VRK3-207ENST00000594092 PIM2Q9P1W9 311 aa18.14■□□□□ 0.5
VRK3-207ENST00000594092 PPP1R1BQ9UD71 204 aaPredicted RBP18.14■□□□□ 0.5
VRK3-207ENST00000594092 CD2APQ9Y5K6 639 aa18.14■□□□□ 0.5
VRK3-207ENST00000594092 FAM205AQ6ZU69 1335 aa18.14■□□□□ 0.49
VRK3-207ENST00000594092 IGSF3O75054 1194 aa18.14■□□□□ 0.49
VRK3-207ENST00000594092 GRIPAP1Q4V328 841 aa18.14■□□□□ 0.49
VRK3-207ENST00000594092 CCDC93Q567U6 631 aa18.14■□□□□ 0.49
VRK3-207ENST00000594092 MIGA1Q8NAN2 632 aa18.14■□□□□ 0.49
VRK3-207ENST00000594092 ARMT1Q9H993 441 aa18.14■□□□□ 0.49
VRK3-207ENST00000594092 TAF6LQ9Y6J9 622 aa18.14■□□□□ 0.49
VRK3-207ENST00000594092 MAST2Q6P0Q8 1798 aa18.14■□□□□ 0.49
VRK3-207ENST00000594092 LDHBP07195 334 aaKnown RBP18.13■□□□□ 0.49
VRK3-207ENST00000594092 ADCK5Q3MIX3 580 aa18.13■□□□□ 0.49
VRK3-207ENST00000594092 TSGA10IPQ3SY00 556 aa18.13■□□□□ 0.49
VRK3-207ENST00000594092 TMED8Q6PL24 325 aaPredicted RBP18.13■□□□□ 0.49
VRK3-207ENST00000594092 LCORLQ8N3X6 602 aa18.13■□□□□ 0.49
VRK3-207ENST00000594092 CCDC88AQ3V6T2 1871 aa18.12■□□□□ 0.49
VRK3-207ENST00000594092 ST18O60284 1047 aa18.12■□□□□ 0.49
VRK3-207ENST00000594092 CYP21A2P08686 494 aa18.12■□□□□ 0.49
VRK3-207ENST00000594092 NEK4P51957 841 aa18.12■□□□□ 0.49
VRK3-207ENST00000594092 GRIK5Q16478 980 aa18.12■□□□□ 0.49
VRK3-207ENST00000594092 RTKN2Q8IZC4 609 aa18.12■□□□□ 0.49
VRK3-207ENST00000594092 SUPT20HQ8NEM7 779 aa18.12■□□□□ 0.49
VRK3-207ENST00000594092 TBC1D22AQ8WUA7 517 aa18.12■□□□□ 0.49
VRK3-207ENST00000594092 UPF3BQ9BZI7 483 aaKnown RBP18.12■□□□□ 0.49
VRK3-207ENST00000594092 G3V3G9 751 aa18.12■□□□□ 0.49
VRK3-207ENST00000594092 FGAP02671 866 aa18.12■□□□□ 0.49
VRK3-207ENST00000594092 GTF2IP78347 998 aa18.12■□□□□ 0.49
VRK3-207ENST00000594092 MFSD14BQ5SR56 506 aa18.12■□□□□ 0.49
VRK3-207ENST00000594092 DCAF8Q5TAQ9 597 aa18.12■□□□□ 0.49
VRK3-207ENST00000594092 DZIP1Q86YF9 867 aaKnown RBP18.12■□□□□ 0.49
VRK3-207ENST00000594092 KLHL34Q8N239 644 aa18.12■□□□□ 0.49
VRK3-207ENST00000594092 TM6SF1Q9BZW5 370 aa18.12■□□□□ 0.49
VRK3-207ENST00000594092 GOLGB1Q14789 3259 aaKnown RBP18.11■□□□□ 0.49
VRK3-207ENST00000594092 BRCA1P38398 1863 aaKnown RBP18.11■□□□□ 0.49
VRK3-207ENST00000594092 MAGEB6P1A0A0J9YX57 407 aa18.11■□□□□ 0.49
VRK3-207ENST00000594092 KIAA2012Q0VF49 1180 aa18.11■□□□□ 0.49
VRK3-207ENST00000594092 DALRD3Q5D0E6 543 aaKnown RBP18.11■□□□□ 0.49
VRK3-207ENST00000594092 TTLL5Q6EMB2 1281 aa18.11■□□□□ 0.49
VRK3-207ENST00000594092 PODNQ7Z5L7 613 aa18.11■□□□□ 0.49
VRK3-207ENST00000594092 JAKMIP1Q96N16 626 aaKnown RBP18.11■□□□□ 0.49
VRK3-207ENST00000594092 PSMD1Q99460 953 aa18.11■□□□□ 0.49
VRK3-207ENST00000594092 RIOK1Q9BRS2 568 aaKnown RBP18.11■□□□□ 0.49
VRK3-207ENST00000594092 DBNDD1Q9H9R9 158 aa18.11■□□□□ 0.49
VRK3-207ENST00000594092 CTNNA3Q9UI47 895 aa18.11■□□□□ 0.49
VRK3-207ENST00000594092 K7ELQ4 463 aaPredicted RBP18.1■□□□□ 0.49
VRK3-207ENST00000594092 CASTP20810 708 aaKnown RBP18.1■□□□□ 0.49
VRK3-207ENST00000594092 AOC3Q16853 763 aa18.1■□□□□ 0.49
VRK3-207ENST00000594092 RPAP1Q9BWH6 1393 aaPredicted RBP18.1■□□□□ 0.49
VRK3-207ENST00000594092 PATL2C9JE40 543 aaKnown RBP18.09■□□□□ 0.49
VRK3-207ENST00000594092 APPP05067 770 aa18.09■□□□□ 0.49
VRK3-207ENST00000594092 GNAT2P19087 354 aa18.09■□□□□ 0.49
VRK3-207ENST00000594092 DYNLL1P63167 89 aaKnown RBP18.09■□□□□ 0.49
VRK3-207ENST00000594092 SOGA3Q5TF21 947 aa18.09■□□□□ 0.49
VRK3-207ENST00000594092 IL27Q8NEV9 243 aa18.09■□□□□ 0.49
VRK3-207ENST00000594092 SPON1Q9HCB6 807 aa18.09■□□□□ 0.49
VRK3-207ENST00000594092 ZSWIM6Q9HCJ5 1215 aa18.09■□□□□ 0.49
VRK3-207ENST00000594092 GSG1L2A8MUP6 293 aa18.09■□□□□ 0.49
VRK3-207ENST00000594092 PRKAB2O43741 272 aa18.09■□□□□ 0.49
VRK3-207ENST00000594092 ECE2O60344 883 aa18.09■□□□□ 0.49
VRK3-207ENST00000594092 KRT32Q14532 448 aa18.09■□□□□ 0.49
VRK3-207ENST00000594092 ALX1Q15699 326 aa18.09■□□□□ 0.49
VRK3-207ENST00000594092 FBXW7Q969H0 707 aa18.09■□□□□ 0.49
VRK3-207ENST00000594092 EPB41L4AQ9HCS5 686 aaPredicted RBP18.09■□□□□ 0.49
VRK3-207ENST00000594092 SLC4A4Q9Y6R1 1079 aa18.09■□□□□ 0.49
VRK3-207ENST00000594092 CPA1P15085 419 aa18.08■□□□□ 0.48
VRK3-207ENST00000594092 PSMA5P28066 241 aa18.08■□□□□ 0.48
VRK3-207ENST00000594092 GSTO1P78417 241 aa18.08■□□□□ 0.48
VRK3-207ENST00000594092 ZMYM6O95789 1325 aa18.08■□□□□ 0.48
VRK3-207ENST00000594092 PPIP5K2O43314 1243 aa18.07■□□□□ 0.48
VRK3-207ENST00000594092 DIXDC1Q155Q3 683 aa18.07■□□□□ 0.48
VRK3-207ENST00000594092 IMMTQ16891 758 aaKnown RBP18.07■□□□□ 0.48
VRK3-207ENST00000594092 IFNL3Q8IZI9 196 aa18.07■□□□□ 0.48
VRK3-207ENST00000594092 CERS5Q8N5B7 392 aa18.07■□□□□ 0.48
VRK3-207ENST00000594092 TTC14Q96N46 770 aa18.07■□□□□ 0.48
VRK3-207ENST00000594092 KCNQ5Q9NR82 932 aa18.07■□□□□ 0.48
VRK3-207ENST00000594092 CYP46A1Q9Y6A2 500 aa18.07■□□□□ 0.48
VRK3-207ENST00000594092 COL9A3Q14050 684 aaPredicted RBP18.07■□□□□ 0.48
VRK3-207ENST00000594092 STOX1Q6ZVD7 989 aa18.07■□□□□ 0.48
VRK3-207ENST00000594092 RUFY3Q7L099 469 aa18.07■□□□□ 0.48
VRK3-207ENST00000594092 AATFQ9NY61 560 aaKnown RBP eCLIP18.07■□□□□ 0.48
VRK3-207ENST00000594092 SUGT1Q9Y2Z0 365 aa18.07■□□□□ 0.48
VRK3-207ENST00000594092 LDHCP07864 332 aa18.06■□□□□ 0.48
VRK3-207ENST00000594092 HAND2P61296 217 aa18.06■□□□□ 0.48
VRK3-207ENST00000594092 SLKQ9H2G2 1235 aaPredicted RBP18.06■□□□□ 0.48
VRK3-207ENST00000594092 SCN9AQ15858 1988 aa18.06■□□□□ 0.48
VRK3-207ENST00000594092 MROH7-TTC4A0A0A0MT08 1334 aa18.06■□□□□ 0.48
VRK3-207ENST00000594092 E7EWF7 191 aa18.05■□□□□ 0.48
VRK3-207ENST00000594092 ZNF213O14771 459 aa18.05■□□□□ 0.48
VRK3-207ENST00000594092 BLOC1S2Q6QNY1 142 aa18.05■□□□□ 0.48
VRK3-207ENST00000594092 SPRYD3Q8NCJ5 442 aa18.05■□□□□ 0.48
VRK3-207ENST00000594092 NLGN2Q8NFZ4 835 aa18.05■□□□□ 0.48
VRK3-207ENST00000594092 SDR42E1Q8WUS8 393 aa18.05■□□□□ 0.48
VRK3-207ENST00000594092 NEK1Q96PY6 1258 aa18.05■□□□□ 0.48
VRK3-207ENST00000594092 MXD3Q9BW11 206 aa18.05■□□□□ 0.48
VRK3-207ENST00000594092 NACAP1Q9BZK3 213 aa18.05■□□□□ 0.48
VRK3-207ENST00000594092 NAPBQ9H115 298 aa18.05■□□□□ 0.48
VRK3-207ENST00000594092 ZNF277Q9NRM2 450 aaPredicted RBP18.05■□□□□ 0.48
VRK3-207ENST00000594092 MYH2Q9UKX2 1941 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms