RNA–Protein interactions for RNA: ENST00000593919.5

VRK3-205, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best) BASIC

Gene VRK3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-205ENST00000593919 PRDX5P30044 214 aa15.79■□□□□ 0.12
VRK3-205ENST00000593919 KCNB2Q92953 911 aa15.79■□□□□ 0.12
VRK3-205ENST00000593919 FOXD4L1Q9NU39 408 aa15.79■□□□□ 0.12
VRK3-205ENST00000593919 UTRNP46939 3433 aa15.78■□□□□ 0.12
VRK3-205ENST00000593919 WDR66Q8TBY9 1149 aa15.78■□□□□ 0.12
VRK3-205ENST00000593919 ZNF384Q8TF68 577 aa15.78■□□□□ 0.12
VRK3-205ENST00000593919 AIDAQ96BJ3 306 aa15.78■□□□□ 0.12
VRK3-205ENST00000593919 ZC3H12CQ9C0D7 883 aaKnown RBP15.78■□□□□ 0.12
VRK3-205ENST00000593919 U3KPZ7 1027 aaPredicted RBP15.78■□□□□ 0.12
VRK3-205ENST00000593919 MYH2Q9UKX2 1941 aa15.78■□□□□ 0.12
VRK3-205ENST00000593919 SALL1Q9NSC2 1324 aa15.78■□□□□ 0.12
VRK3-205ENST00000593919 ZKSCAN1P17029 563 aaPredicted RBP15.78■□□□□ 0.12
VRK3-205ENST00000593919 RNF20Q5VTR2 975 aa15.78■□□□□ 0.12
VRK3-205ENST00000593919 ADGRA1Q86SQ6 560 aa15.78■□□□□ 0.12
VRK3-205ENST00000593919 LAMA4Q16363 1823 aa15.78■□□□□ 0.12
VRK3-205ENST00000593919 C21orf2O43822 256 aa15.77■□□□□ 0.12
VRK3-205ENST00000593919 CYP7A1P22680 504 aa15.77■□□□□ 0.12
VRK3-205ENST00000593919 TGFB2P61812 414 aa15.77■□□□□ 0.12
VRK3-205ENST00000593919 ZGPATQ8N5A5 531 aaKnown RBP15.77■□□□□ 0.12
VRK3-205ENST00000593919 NSUN4Q96CB9 384 aaKnown RBP15.77■□□□□ 0.12
VRK3-205ENST00000593919 EYA3Q99504 573 aa15.77■□□□□ 0.12
VRK3-205ENST00000593919 COA1Q9GZY4 146 aa15.77■□□□□ 0.12
VRK3-205ENST00000593919 SCN9AQ15858 1988 aa15.77■□□□□ 0.11
VRK3-205ENST00000593919 MBD4O95243 580 aa15.76■□□□□ 0.11
VRK3-205ENST00000593919 DDIT3P35638 169 aa15.76■□□□□ 0.11
VRK3-205ENST00000593919 PTGER2P43116 358 aa15.76■□□□□ 0.11
VRK3-205ENST00000593919 NEK4P51957 841 aa15.76■□□□□ 0.11
VRK3-205ENST00000593919 MECOMQ03112 1051 aa15.76■□□□□ 0.11
VRK3-205ENST00000593919 ADCK5Q3MIX3 580 aa15.76■□□□□ 0.11
VRK3-205ENST00000593919 CC2D2BQ6DHV5 1058 aa15.76■□□□□ 0.11
VRK3-205ENST00000593919 NAA16Q6N069 864 aaPredicted RBP15.76■□□□□ 0.11
VRK3-205ENST00000593919 RTFDC1Q9BY42 306 aaPredicted RBP15.76■□□□□ 0.11
VRK3-205ENST00000593919 UPF3BQ9BZI7 483 aaKnown RBP15.76■□□□□ 0.11
VRK3-205ENST00000593919 PPP1R1BQ9UD71 204 aaPredicted RBP15.76■□□□□ 0.11
VRK3-205ENST00000593919 TAF6LQ9Y6J9 622 aa15.76■□□□□ 0.11
VRK3-205ENST00000593919 MIGA1Q8NAN2 632 aa15.76■□□□□ 0.11
VRK3-205ENST00000593919 STRBPQ96SI9 672 aaKnown RBP15.76■□□□□ 0.11
VRK3-205ENST00000593919 ST18O60284 1047 aa15.75■□□□□ 0.11
VRK3-205ENST00000593919 CYP21A2P08686 494 aa15.75■□□□□ 0.11
VRK3-205ENST00000593919 SPTY2D1Q68D10 685 aaPredicted RBP15.75■□□□□ 0.11
VRK3-205ENST00000593919 ILDR2Q71H61 639 aa15.75■□□□□ 0.11
VRK3-205ENST00000593919 LCORLQ8N3X6 602 aa15.75■□□□□ 0.11
VRK3-205ENST00000593919 ARMT1Q9H993 441 aa15.75■□□□□ 0.11
VRK3-205ENST00000593919 LDHBP07195 334 aaKnown RBP15.75■□□□□ 0.11
VRK3-205ENST00000593919 CASTP20810 708 aaKnown RBP15.75■□□□□ 0.11
VRK3-205ENST00000593919 MCM4P33991 863 aa15.75■□□□□ 0.11
VRK3-205ENST00000593919 GRIK5Q16478 980 aa15.75■□□□□ 0.11
VRK3-205ENST00000593919 DOK7Q18PE1 504 aa15.75■□□□□ 0.11
VRK3-205ENST00000593919 JAKMIP1Q96N16 626 aaKnown RBP15.75■□□□□ 0.11
VRK3-205ENST00000593919 RPAP1Q9BWH6 1393 aaPredicted RBP15.74■□□□□ 0.11
VRK3-205ENST00000593919 BAZ2AQ9UIF9 1905 aaKnown RBP15.74■□□□□ 0.11
VRK3-205ENST00000593919 ZNF646O15015 1829 aaPredicted RBP15.74■□□□□ 0.11
VRK3-205ENST00000593919 FGAP02671 866 aa15.74■□□□□ 0.11
VRK3-205ENST00000593919 TSGA10IPQ3SY00 556 aa15.74■□□□□ 0.11
VRK3-205ENST00000593919 MFSD14BQ5SR56 506 aa15.74■□□□□ 0.11
VRK3-205ENST00000593919 TTLL5Q6EMB2 1281 aa15.74■□□□□ 0.11
VRK3-205ENST00000593919 DZIP1Q86YF9 867 aaKnown RBP15.74■□□□□ 0.11
VRK3-205ENST00000593919 PIM2Q9P1W9 311 aa15.74■□□□□ 0.11
VRK3-205ENST00000593919 FAM205AQ6ZU69 1335 aa15.74■□□□□ 0.11
VRK3-205ENST00000593919 GTF2IP78347 998 aa15.73■□□□□ 0.11
VRK3-205ENST00000593919 CCDC93Q567U6 631 aa15.73■□□□□ 0.11
VRK3-205ENST00000593919 TM6SF1Q9BZW5 370 aa15.73■□□□□ 0.11
VRK3-205ENST00000593919 DBNDD1Q9H9R9 158 aa15.73■□□□□ 0.11
VRK3-205ENST00000593919 MAGEB6P1A0A0J9YX57 407 aa15.73■□□□□ 0.11
VRK3-205ENST00000593919 G3V3G9 751 aa15.73■□□□□ 0.11
VRK3-205ENST00000593919 CPA1P15085 419 aa15.73■□□□□ 0.11
VRK3-205ENST00000593919 AOC3Q16853 763 aa15.73■□□□□ 0.11
VRK3-205ENST00000593919 DCAF8Q5TAQ9 597 aa15.73■□□□□ 0.11
VRK3-205ENST00000593919 TBC1D22AQ8WUA7 517 aa15.73■□□□□ 0.11
VRK3-205ENST00000593919 RIOK1Q9BRS2 568 aaKnown RBP15.73■□□□□ 0.11
VRK3-205ENST00000593919 CIZ1Q9ULV3 898 aaPredicted RBP15.73■□□□□ 0.11
VRK3-205ENST00000593919 FER1L6Q2WGJ9 1857 aa15.72■□□□□ 0.11
VRK3-205ENST00000593919 APPP05067 770 aa15.72■□□□□ 0.11
VRK3-205ENST00000593919 COL9A3Q14050 684 aaPredicted RBP15.72■□□□□ 0.11
VRK3-205ENST00000593919 GRIPAP1Q4V328 841 aa15.72■□□□□ 0.11
VRK3-205ENST00000593919 TMED8Q6PL24 325 aaPredicted RBP15.72■□□□□ 0.11
VRK3-205ENST00000593919 ZSWIM6Q9HCJ5 1215 aa15.72■□□□□ 0.11
VRK3-205ENST00000593919 EPB41L4AQ9HCS5 686 aaPredicted RBP15.72■□□□□ 0.11
VRK3-205ENST00000593919 CTNNA3Q9UI47 895 aa15.72■□□□□ 0.11
VRK3-205ENST00000593919 CD2APQ9Y5K6 639 aa15.72■□□□□ 0.11
VRK3-205ENST00000593919 CDK5RAP2Q96SN8 1893 aa15.72■□□□□ 0.11
VRK3-205ENST00000593919 PSME4Q14997 1843 aa15.71■□□□□ 0.11
VRK3-205ENST00000593919 PATL2C9JE40 543 aaKnown RBP15.71■□□□□ 0.11
VRK3-205ENST00000593919 PRKAB2O43741 272 aa15.71■□□□□ 0.11
VRK3-205ENST00000593919 IGSF3O75054 1194 aa15.71■□□□□ 0.11
VRK3-205ENST00000593919 GNAT2P19087 354 aa15.71■□□□□ 0.11
VRK3-205ENST00000593919 DYNLL1P63167 89 aaKnown RBP15.71■□□□□ 0.11
VRK3-205ENST00000593919 KIAA2012Q0VF49 1180 aa15.71■□□□□ 0.11
VRK3-205ENST00000593919 PODNQ7Z5L7 613 aa15.71■□□□□ 0.11
VRK3-205ENST00000593919 RTKN2Q8IZC4 609 aa15.71■□□□□ 0.11
VRK3-205ENST00000593919 SUPT20HQ8NEM7 779 aa15.71■□□□□ 0.11
VRK3-205ENST00000593919 FBXW7Q969H0 707 aa15.71■□□□□ 0.11
VRK3-205ENST00000593919 SLC4A4Q9Y6R1 1079 aa15.71■□□□□ 0.11
VRK3-205ENST00000593919 GSG1L2A8MUP6 293 aa15.71■□□□□ 0.1
VRK3-205ENST00000593919 PSMA5P28066 241 aa15.71■□□□□ 0.1
VRK3-205ENST00000593919 HAND2P61296 217 aa15.71■□□□□ 0.1
VRK3-205ENST00000593919 KRT32Q14532 448 aa15.71■□□□□ 0.1
VRK3-205ENST00000593919 DIXDC1Q155Q3 683 aa15.71■□□□□ 0.1
VRK3-205ENST00000593919 IMMTQ16891 758 aaKnown RBP15.71■□□□□ 0.1
VRK3-205ENST00000593919 STOX1Q6ZVD7 989 aa15.71■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms