RNA–Protein interactions for RNA: ENST00000593706.3

PNKP-202, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 849 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-202ENST00000593706 FAM84BQ96KN1 310 aaPredicted RBP18.55■□□□□ 0.56
PNKP-202ENST00000593706 BICC1Q9H694 974 aaKnown RBP18.55■□□□□ 0.56
PNKP-202ENST00000593706 ELP3Q9H9T3 547 aa18.55■□□□□ 0.56
PNKP-202ENST00000593706 ZSWIM8A7E2V4 1837 aa18.54■□□□□ 0.56
PNKP-202ENST00000593706 TCP10L2B9ZVM9 353 aa18.54■□□□□ 0.56
PNKP-202ENST00000593706 GJA5P36382 358 aa18.54■□□□□ 0.56
PNKP-202ENST00000593706 CRKP46108 304 aa18.54■□□□□ 0.56
PNKP-202ENST00000593706 CHAF1AQ13111 956 aaPredicted RBP18.54■□□□□ 0.56
PNKP-202ENST00000593706 CRHR2Q13324 411 aa18.54■□□□□ 0.56
PNKP-202ENST00000593706 METTL24Q5JXM2 366 aa18.54■□□□□ 0.56
PNKP-202ENST00000593706 OTOP1Q7RTM1 612 aa18.54■□□□□ 0.56
PNKP-202ENST00000593706 DZIP1LQ8IYY4 767 aaKnown RBP18.54■□□□□ 0.56
PNKP-202ENST00000593706 OPTNQ96CV9 577 aa18.54■□□□□ 0.56
PNKP-202ENST00000593706 ERO1AQ96HE7 468 aa18.54■□□□□ 0.56
PNKP-202ENST00000593706 IQSEC3Q9UPP2 1182 aaPredicted RBP18.54■□□□□ 0.56
PNKP-202ENST00000593706 CAVIN4Q5BKX8 364 aa18.53■□□□□ 0.56
PNKP-202ENST00000593706 KAZALD1Q96I82 304 aa18.53■□□□□ 0.56
PNKP-202ENST00000593706 DOCK2Q92608 1830 aa18.53■□□□□ 0.56
PNKP-202ENST00000593706 CDAN1Q8IWY9 1227 aa18.52■□□□□ 0.56
PNKP-202ENST00000593706 CD99L2Q8TCZ2 262 aa18.52■□□□□ 0.56
PNKP-202ENST00000593706 TMEM39BQ9GZU3 492 aa18.52■□□□□ 0.56
PNKP-202ENST00000593706 RIPOR2Q9Y4F9 1068 aa18.52■□□□□ 0.56
PNKP-202ENST00000593706 UTYO14607 1347 aa18.51■□□□□ 0.55
PNKP-202ENST00000593706 MYH2Q9UKX2 1941 aa18.51■□□□□ 0.55
PNKP-202ENST00000593706 TBC1D22AQ8WUA7 517 aa18.51■□□□□ 0.55
PNKP-202ENST00000593706 CSADQ9Y600 493 aa18.51■□□□□ 0.55
PNKP-202ENST00000593706 VGLL4Q14135 290 aa18.5■□□□□ 0.55
PNKP-202ENST00000593706 RABL6Q3YEC7 729 aaPredicted RBP18.5■□□□□ 0.55
PNKP-202ENST00000593706 LRRC24Q50LG9 513 aa18.5■□□□□ 0.55
PNKP-202ENST00000593706 INTS3Q68E01 1043 aaKnown RBP18.5■□□□□ 0.55
PNKP-202ENST00000593706 TEKT1Q969V4 418 aa18.5■□□□□ 0.55
PNKP-202ENST00000593706 TEPSINQ96N21 525 aa18.5■□□□□ 0.55
PNKP-202ENST00000593706 EFCC1Q9HA90 598 aa18.5■□□□□ 0.55
PNKP-202ENST00000593706 TMOD2Q9NZR1 351 aa18.5■□□□□ 0.55
PNKP-202ENST00000593706 E9PSI1 815 aa18.49■□□□□ 0.55
PNKP-202ENST00000593706 SP3Q02447 781 aa18.49■□□□□ 0.55
PNKP-202ENST00000593706 GRIK5Q16478 980 aa18.49■□□□□ 0.55
PNKP-202ENST00000593706 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.49■□□□□ 0.55
PNKP-202ENST00000593706 FBXO33Q7Z6M2 555 aa18.49■□□□□ 0.55
PNKP-202ENST00000593706 ANKRD44Q8N8A2 993 aa18.49■□□□□ 0.55
PNKP-202ENST00000593706 CNKSR2Q8WXI2 1034 aa18.49■□□□□ 0.55
PNKP-202ENST00000593706 OTUD5Q96G74 571 aa18.49■□□□□ 0.55
PNKP-202ENST00000593706 PTPN18Q99952 460 aa18.49■□□□□ 0.55
PNKP-202ENST00000593706 PTPN22Q9Y2R2 807 aa18.49■□□□□ 0.55
PNKP-202ENST00000593706 MAST3O60307 1309 aa18.49■□□□□ 0.55
PNKP-202ENST00000593706 PTPRCP08575 1304 aa18.49■□□□□ 0.55
PNKP-202ENST00000593706 CCL15-CCL14A0A0B4J2E2 113 aa18.48■□□□□ 0.55
PNKP-202ENST00000593706 TESPA1A2RU30 521 aaPredicted RBP18.48■□□□□ 0.55
PNKP-202ENST00000593706 PDE8BO95263 885 aa18.48■□□□□ 0.55
PNKP-202ENST00000593706 CACNB3P54284 484 aa18.48■□□□□ 0.55
PNKP-202ENST00000593706 SLFN5Q08AF3 891 aa18.48■□□□□ 0.55
PNKP-202ENST00000593706 TAF1CQ15572 869 aaPredicted RBP18.48■□□□□ 0.55
PNKP-202ENST00000593706 CCL15Q16663 113 aa18.48■□□□□ 0.55
PNKP-202ENST00000593706 TRMT2AQ8IZ69 625 aaKnown RBP18.48■□□□□ 0.55
PNKP-202ENST00000593706 CEP290O15078 2479 aa18.48■□□□□ 0.55
PNKP-202ENST00000593706 GTF2A2P52657 109 aa18.47■□□□□ 0.55
PNKP-202ENST00000593706 MAP3K9P80192 1104 aa18.47■□□□□ 0.55
PNKP-202ENST00000593706 HDLBPQ00341 1268 aaKnown RBP18.47■□□□□ 0.55
PNKP-202ENST00000593706 PUM3Q15397 648 aaKnown RBP18.47■□□□□ 0.55
PNKP-202ENST00000593706 MRPL50Q8N5N7 158 aaKnown RBP18.47■□□□□ 0.55
PNKP-202ENST00000593706 VGLL2Q8N8G2 317 aa18.47■□□□□ 0.55
PNKP-202ENST00000593706 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.47■□□□□ 0.55
PNKP-202ENST00000593706 KLHDC4Q8TBB5 520 aa18.47■□□□□ 0.55
PNKP-202ENST00000593706 MS4A4AQ96JQ5 239 aa18.47■□□□□ 0.55
PNKP-202ENST00000593706 MGAMO43451 1857 aa18.47■□□□□ 0.55
PNKP-202ENST00000593706 POTEFA5A3E0 1075 aa18.46■□□□□ 0.55
PNKP-202ENST00000593706 WDHD1O75717 1129 aaPredicted RBP18.46■□□□□ 0.55
PNKP-202ENST00000593706 IFIT1P09914 478 aaKnown RBP18.46■□□□□ 0.55
PNKP-202ENST00000593706 BCAMP50895 628 aa18.46■□□□□ 0.55
PNKP-202ENST00000593706 BRI3BPQ8WY22 251 aa18.46■□□□□ 0.55
PNKP-202ENST00000593706 ZFYVE28Q9HCC9 887 aa18.46■□□□□ 0.55
PNKP-202ENST00000593706 PCDH10Q9P2E7 1040 aa18.46■□□□□ 0.55
PNKP-202ENST00000593706 HOOK2Q96ED9 719 aa18.45■□□□□ 0.54
PNKP-202ENST00000593706 CDCA7LQ96GN5 454 aa18.45■□□□□ 0.54
PNKP-202ENST00000593706 ZDHHC15Q96MV8 337 aa18.45■□□□□ 0.54
PNKP-202ENST00000593706 WRNIP1Q96S55 665 aa18.45■□□□□ 0.54
PNKP-202ENST00000593706 KIF16BQ96L93 1317 aa18.45■□□□□ 0.54
PNKP-202ENST00000593706 ARHGEF6Q15052 776 aa18.44■□□□□ 0.54
PNKP-202ENST00000593706 PTPRFP10586 1907 aa18.44■□□□□ 0.54
PNKP-202ENST00000593706 RPAP1Q9BWH6 1393 aaPredicted RBP18.43■□□□□ 0.54
PNKP-202ENST00000593706 SPDYE5A6NIY4 337 aa18.43■□□□□ 0.54
PNKP-202ENST00000593706 SLC5A1P13866 664 aa18.43■□□□□ 0.54
PNKP-202ENST00000593706 FAM83AQ86UY5 434 aa18.43■□□□□ 0.54
PNKP-202ENST00000593706 FAM43AQ8N2R8 423 aa18.43■□□□□ 0.54
PNKP-202ENST00000593706 SSH1Q8WYL5 1049 aa18.43■□□□□ 0.54
PNKP-202ENST00000593706 ARMC5Q96C12 935 aa18.43■□□□□ 0.54
PNKP-202ENST00000593706 SUGT1Q9Y2Z0 365 aa18.43■□□□□ 0.54
PNKP-202ENST00000593706 SNCAIPQ9Y6H5 919 aa18.43■□□□□ 0.54
PNKP-202ENST00000593706 CETPP11597 493 aa18.42■□□□□ 0.54
PNKP-202ENST00000593706 SLC9C1Q4G0N8 1177 aa18.42■□□□□ 0.54
PNKP-202ENST00000593706 DCAF15Q66K64 600 aa18.42■□□□□ 0.54
PNKP-202ENST00000593706 DIEXFQ68CQ4 756 aaKnown RBP18.42■□□□□ 0.54
PNKP-202ENST00000593706 ERO1BQ86YB8 467 aa18.42■□□□□ 0.54
PNKP-202ENST00000593706 MIER1Q8N108 512 aa18.42■□□□□ 0.54
PNKP-202ENST00000593706 ZKSCAN4Q969J2 545 aaPredicted RBP18.42■□□□□ 0.54
PNKP-202ENST00000593706 USP44Q9H0E7 712 aa18.42■□□□□ 0.54
PNKP-202ENST00000593706 DOCK1Q14185 1865 aa18.41■□□□□ 0.54
PNKP-202ENST00000593706 CAP1Q01518 475 aa18.41■□□□□ 0.54
PNKP-202ENST00000593706 FKBP1CQ5VVH2 108 aa18.41■□□□□ 0.54
PNKP-202ENST00000593706 GCC1Q96CN9 775 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 118.2 ms