RNA–Protein interactions for RNA: ENST00000593641.3

SSBP4-203, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-203ENST00000593641 CHAF1AQ13111 956 aaPredicted RBP28.46■■■□□ 2.15
SSBP4-203ENST00000593641 LRRC24Q50LG9 513 aa28.46■■■□□ 2.15
SSBP4-203ENST00000593641 ANKRD44Q8N8A2 993 aa28.46■■■□□ 2.15
SSBP4-203ENST00000593641 TBC1D22AQ8WUA7 517 aa28.46■■■□□ 2.15
SSBP4-203ENST00000593641 IQSEC3Q9UPP2 1182 aaPredicted RBP28.46■■■□□ 2.15
SSBP4-203ENST00000593641 IGF2BP3O00425 579 aaKnown RBP eCLIP28.45■■■□□ 2.14
SSBP4-203ENST00000593641 SLC34A2O95436 690 aa28.45■■■□□ 2.14
SSBP4-203ENST00000593641 FBXO33Q7Z6M2 555 aa28.45■■■□□ 2.14
SSBP4-203ENST00000593641 MYH13Q9UKX3 1938 aa28.44■■■□□ 2.14
SSBP4-203ENST00000593641 PDE8BO95263 885 aa28.44■■■□□ 2.14
SSBP4-203ENST00000593641 TCP10L2B9ZVM9 353 aa28.43■■■□□ 2.14
SSBP4-203ENST00000593641 SSH1Q8WYL5 1049 aa28.43■■■□□ 2.14
SSBP4-203ENST00000593641 VGLL2Q8N8G2 317 aa28.42■■■□□ 2.14
SSBP4-203ENST00000593641 ELP3Q9H9T3 547 aa28.42■■■□□ 2.14
SSBP4-203ENST00000593641 TRIM17Q9Y577 477 aa28.42■■■□□ 2.14
SSBP4-203ENST00000593641 GJA5P36382 358 aa28.41■■■□□ 2.14
SSBP4-203ENST00000593641 HDLBPQ00341 1268 aaKnown RBP28.41■■■□□ 2.14
SSBP4-203ENST00000593641 KLHDC4Q8TBB5 520 aa28.41■■■□□ 2.14
SSBP4-203ENST00000593641 TEKT1Q969V4 418 aa28.41■■■□□ 2.14
SSBP4-203ENST00000593641 OPTNQ96CV9 577 aa28.41■■■□□ 2.14
SSBP4-203ENST00000593641 TEPSINQ96N21 525 aa28.41■■■□□ 2.14
SSBP4-203ENST00000593641 TMEM39BQ9GZU3 492 aa28.41■■■□□ 2.14
SSBP4-203ENST00000593641 IFIT1P09914 478 aaKnown RBP28.39■■■□□ 2.14
SSBP4-203ENST00000593641 PUM3Q15397 648 aaKnown RBP28.39■■■□□ 2.14
SSBP4-203ENST00000593641 GRIK5Q16478 980 aa28.39■■■□□ 2.14
SSBP4-203ENST00000593641 CDAN1Q8IWY9 1227 aa28.39■■■□□ 2.14
SSBP4-203ENST00000593641 ERO1AQ96HE7 468 aa28.39■■■□□ 2.14
SSBP4-203ENST00000593641 USP44Q9H0E7 712 aa28.39■■■□□ 2.14
SSBP4-203ENST00000593641 TMOD2Q9NZR1 351 aa28.39■■■□□ 2.14
SSBP4-203ENST00000593641 MAST3O60307 1309 aa28.39■■■□□ 2.13
SSBP4-203ENST00000593641 BCAMP50895 628 aa28.38■■■□□ 2.13
SSBP4-203ENST00000593641 CRHR2Q13324 411 aa28.38■■■□□ 2.13
SSBP4-203ENST00000593641 CSADQ9Y600 493 aa28.38■■■□□ 2.13
SSBP4-203ENST00000593641 KIF16BQ96L93 1317 aa28.38■■■□□ 2.13
SSBP4-203ENST00000593641 TESPA1A2RU30 521 aaPredicted RBP28.37■■■□□ 2.13
SSBP4-203ENST00000593641 OTOP1Q7RTM1 612 aa28.37■■■□□ 2.13
SSBP4-203ENST00000593641 HTTP42858 3142 aa28.36■■■□□ 2.13
SSBP4-203ENST00000593641 SLFN5Q08AF3 891 aa28.36■■■□□ 2.13
SSBP4-203ENST00000593641 ALDH1L2Q3SY69 923 aa28.36■■■□□ 2.13
SSBP4-203ENST00000593641 PPP1R3FQ6ZSY5 799 aaPredicted RBP28.36■■■□□ 2.13
SSBP4-203ENST00000593641 SUGT1Q9Y2Z0 365 aa28.36■■■□□ 2.13
SSBP4-203ENST00000593641 MAP3K9P80192 1104 aa28.35■■■□□ 2.13
SSBP4-203ENST00000593641 VGLL4Q14135 290 aa28.35■■■□□ 2.13
SSBP4-203ENST00000593641 DDX55Q8NHQ9 600 aaKnown RBP eCLIP28.35■■■□□ 2.135e-8■■■■■ 57.5
SSBP4-203ENST00000593641 ZDHHC15Q96MV8 337 aa28.35■■■□□ 2.13
SSBP4-203ENST00000593641 PTPN18Q99952 460 aa28.35■■■□□ 2.13
SSBP4-203ENST00000593641 SMC4Q9NTJ3 1288 aa28.35■■■□□ 2.13
SSBP4-203ENST00000593641 KIAA0100Q14667 2235 aaKnown RBP28.34■■■□□ 2.13
SSBP4-203ENST00000593641 EYA2O00167 538 aa28.34■■■□□ 2.13
SSBP4-203ENST00000593641 SLC5A1P13866 664 aa28.34■■■□□ 2.13
SSBP4-203ENST00000593641 FGFR2P21802 821 aa28.34■■■□□ 2.13
SSBP4-203ENST00000593641 CACNB3P54284 484 aa28.34■■■□□ 2.13
SSBP4-203ENST00000593641 MRIQ9BWK5 157 aa28.34■■■□□ 2.13
SSBP4-203ENST00000593641 CENPFP49454 3210 aa28.33■■■□□ 2.13
SSBP4-203ENST00000593641 GTF2A2P52657 109 aa28.33■■■□□ 2.13
SSBP4-203ENST00000593641 CD99L2Q8TCZ2 262 aa28.33■■■□□ 2.13
SSBP4-203ENST00000593641 HOOK2Q96ED9 719 aa28.33■■■□□ 2.13
SSBP4-203ENST00000593641 MS4A4AQ96JQ5 239 aa28.33■■■□□ 2.13
SSBP4-203ENST00000593641 SP3Q02447 781 aa28.32■■■□□ 2.12
SSBP4-203ENST00000593641 PRPF38BQ5VTL8 546 aaKnown RBP28.32■■■□□ 2.12
SSBP4-203ENST00000593641 CNKSR2Q8WXI2 1034 aa28.32■■■□□ 2.12
SSBP4-203ENST00000593641 LPIN2Q92539 896 aa28.32■■■□□ 2.12
SSBP4-203ENST00000593641 OTUD5Q96G74 571 aa28.32■■■□□ 2.12
SSBP4-203ENST00000593641 AK9Q5TCS8 1911 aa28.31■■■□□ 2.12
SSBP4-203ENST00000593641 CCL15-CCL14A0A0B4J2E2 113 aa28.31■■■□□ 2.12
SSBP4-203ENST00000593641 CCL15Q16663 113 aa28.31■■■□□ 2.12
SSBP4-203ENST00000593641 FAM83AQ86UY5 434 aa28.31■■■□□ 2.12
SSBP4-203ENST00000593641 EFCC1Q9HA90 598 aa28.31■■■□□ 2.12
SSBP4-203ENST00000593641 RFX5P48382 616 aaPredicted RBP28.3■■■□□ 2.12
SSBP4-203ENST00000593641 FKBP1CQ5VVH2 108 aa28.3■■■□□ 2.12
SSBP4-203ENST00000593641 INTS3Q68E01 1043 aaKnown RBP28.3■■■□□ 2.12
SSBP4-203ENST00000593641 HHIPL2Q6UWX4 724 aa28.3■■■□□ 2.12
SSBP4-203ENST00000593641 WDR66Q8TBY9 1149 aa28.3■■■□□ 2.12
SSBP4-203ENST00000593641 BRI3BPQ8WY22 251 aa28.3■■■□□ 2.12
SSBP4-203ENST00000593641 UBTFL1P0CB47 393 aaPredicted RBP28.29■■■□□ 2.12
SSBP4-203ENST00000593641 TAF1CQ15572 869 aaPredicted RBP28.29■■■□□ 2.12
SSBP4-203ENST00000593641 APOBEC3HQ6NTF7 200 aaKnown RBP28.29■■■□□ 2.12
SSBP4-203ENST00000593641 WRNIP1Q96S55 665 aa28.29■■■□□ 2.12
SSBP4-203ENST00000593641 ZFYVE28Q9HCC9 887 aa28.29■■■□□ 2.12
SSBP4-203ENST00000593641 PTPN22Q9Y2R2 807 aa28.29■■■□□ 2.12
SSBP4-203ENST00000593641 RPAP1Q9BWH6 1393 aaPredicted RBP28.28■■■□□ 2.12
SSBP4-203ENST00000593641 SPDYE5A6NIY4 337 aa28.28■■■□□ 2.12
SSBP4-203ENST00000593641 CDCA7LQ96GN5 454 aa28.28■■■□□ 2.12
SSBP4-203ENST00000593641 WDHD1O75717 1129 aaPredicted RBP28.27■■■□□ 2.12
SSBP4-203ENST00000593641 DCAF15Q66K64 600 aa28.27■■■□□ 2.12
SSBP4-203ENST00000593641 FBXO3Q9UK99 471 aa28.27■■■□□ 2.12
SSBP4-203ENST00000593641 ARHGEF6Q15052 776 aa28.26■■■□□ 2.11
SSBP4-203ENST00000593641 SIL1Q9H173 461 aa28.26■■■□□ 2.11
SSBP4-203ENST00000593641 SNCAIPQ9Y6H5 919 aa28.26■■■□□ 2.11
SSBP4-203ENST00000593641 RBBP6Q7Z6E9 1792 aaKnown RBP28.26■■■□□ 2.11
SSBP4-203ENST00000593641 ATG9AQ7Z3C6 839 aa28.25■■■□□ 2.11
SSBP4-203ENST00000593641 ERO1BQ86YB8 467 aa28.25■■■□□ 2.11
SSBP4-203ENST00000593641 HDAC5Q9UQL6 1122 aa28.25■■■□□ 2.11
SSBP4-203ENST00000593641 CIAO1O76071 339 aa28.24■■■□□ 2.11
SSBP4-203ENST00000593641 CT47B1P0C2W7 299 aaPredicted RBP28.24■■■□□ 2.11
SSBP4-203ENST00000593641 ATP2B3Q16720 1220 aa28.24■■■□□ 2.11
SSBP4-203ENST00000593641 FAM43AQ8N2R8 423 aa28.24■■■□□ 2.11
SSBP4-203ENST00000593641 GNL3LQ9NVN8 582 aaKnown RBP28.24■■■□□ 2.11
SSBP4-203ENST00000593641 CEP126Q9P2H0 1117 aa28.24■■■□□ 2.11
SSBP4-203ENST00000593641 CETPP11597 493 aa28.23■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms