RNA–Protein interactions for RNA: ENST00000593330.1

SOX2-OT-219, SOX2 overlapping transcript, humanhuman

TSL 3

Gene SOX2-OT, Length 468 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-219ENST00000593330 TNFRSF21O75509 655 aa9.52□□□□□ -0.89
SOX2-OT-219ENST00000593330 ADH5P11766 374 aa9.52□□□□□ -0.89
SOX2-OT-219ENST00000593330 EIF1AXP47813 144 aaKnown RBP9.52□□□□□ -0.89
SOX2-OT-219ENST00000593330 MTMR7Q9Y216 660 aa9.52□□□□□ -0.89
SOX2-OT-219ENST00000593330 SLC5A6Q9Y289 635 aa9.52□□□□□ -0.89
SOX2-OT-219ENST00000593330 AMOTL2Q9Y2J4 779 aa9.52□□□□□ -0.89
SOX2-OT-219ENST00000593330 HNRNPUQ00839 825 aaKnown RBP eCLIP9.51□□□□□ -0.89
SOX2-OT-219ENST00000593330 AAMPQ13685 434 aa9.51□□□□□ -0.89
SOX2-OT-219ENST00000593330 HGSNATQ68CP4 663 aa9.51□□□□□ -0.89
SOX2-OT-219ENST00000593330 MISP3Q96FF7 219 aa9.51□□□□□ -0.89
SOX2-OT-219ENST00000593330 PAK6Q9NQU5 681 aaPredicted RBP9.51□□□□□ -0.89
SOX2-OT-219ENST00000593330 ARID1BQ8NFD5 2236 aaPredicted RBP9.51□□□□□ -0.89
SOX2-OT-219ENST00000593330 EREGO14944 169 aa9.5□□□□□ -0.89
SOX2-OT-219ENST00000593330 LRRC4CQ9HCJ2 640 aa9.5□□□□□ -0.89
SOX2-OT-219ENST00000593330 RAD18Q9NS91 495 aa9.5□□□□□ -0.89
SOX2-OT-219ENST00000593330 DLGAP3O95886 979 aa9.49□□□□□ -0.89
SOX2-OT-219ENST00000593330 ADMP35318 185 aa9.49□□□□□ -0.89
SOX2-OT-219ENST00000593330 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.49□□□□□ -0.89
SOX2-OT-219ENST00000593330 FAM170BA6NMN3 283 aa9.48□□□□□ -0.89
SOX2-OT-219ENST00000593330 FAM13AO94988 1023 aa9.48□□□□□ -0.89
SOX2-OT-219ENST00000593330 CYP27C1Q4G0S4 372 aa9.48□□□□□ -0.89
SOX2-OT-219ENST00000593330 CLEC4MQ9H2X3 399 aaPredicted RBP9.48□□□□□ -0.89
SOX2-OT-219ENST00000593330 NFICP08651 508 aa9.47□□□□□ -0.89
SOX2-OT-219ENST00000593330 RAB6AP20340 208 aa9.47□□□□□ -0.89
SOX2-OT-219ENST00000593330 MPSTP25325 297 aa9.47□□□□□ -0.89
SOX2-OT-219ENST00000593330 POU4F3Q15319 338 aa9.47□□□□□ -0.89
SOX2-OT-219ENST00000593330 PKN1Q16512 942 aa9.47□□□□□ -0.89
SOX2-OT-219ENST00000593330 NFXL1Q6ZNB6 911 aa9.47□□□□□ -0.89
SOX2-OT-219ENST00000593330 ZC3H7BQ9UGR2 993 aaKnown RBP9.47□□□□□ -0.89
SOX2-OT-219ENST00000593330 POLIQ9UNA4 740 aa9.47□□□□□ -0.89
SOX2-OT-219ENST00000593330 ACTL7BQ9Y614 415 aa9.47□□□□□ -0.89
SOX2-OT-219ENST00000593330 A6NHS1 94 aa9.46□□□□□ -0.9
SOX2-OT-219ENST00000593330 PCDH1Q08174 1060 aa9.46□□□□□ -0.9
SOX2-OT-219ENST00000593330 PLCL1Q15111 1095 aa9.46□□□□□ -0.9
SOX2-OT-219ENST00000593330 DYMQ7RTS9 669 aa9.46□□□□□ -0.9
SOX2-OT-219ENST00000593330 GATA6Q92908 595 aa9.46□□□□□ -0.9
SOX2-OT-219ENST00000593330 CORO1BQ9BR76 489 aa9.46□□□□□ -0.9
SOX2-OT-219ENST00000593330 MAOBP27338 520 aa9.45□□□□□ -0.9
SOX2-OT-219ENST00000593330 ZNF765Q7L2R6 523 aa9.45□□□□□ -0.9
SOX2-OT-219ENST00000593330 GTF3C2Q8WUA4 911 aaPredicted RBP9.45□□□□□ -0.9
SOX2-OT-219ENST00000593330 CCDC97Q96F63 343 aaPredicted RBP9.45□□□□□ -0.9
SOX2-OT-219ENST00000593330 SEMA6CQ9H3T2 930 aa9.45□□□□□ -0.9
SOX2-OT-219ENST00000593330 ACSS3Q9H6R3 686 aa9.45□□□□□ -0.9
SOX2-OT-219ENST00000593330 SYNGAP1Q96PV0 1343 aa9.45□□□□□ -0.9
SOX2-OT-219ENST00000593330 OGFOD3Q6PK18 319 aa9.44□□□□□ -0.9
SOX2-OT-219ENST00000593330 NRSN2Q9GZP1 204 aa9.44□□□□□ -0.9
SOX2-OT-219ENST00000593330 NEFLP07196 543 aa9.43□□□□□ -0.9
SOX2-OT-219ENST00000593330 NPR3P17342 541 aa9.43□□□□□ -0.9
SOX2-OT-219ENST00000593330 ASPAP45381 313 aa9.43□□□□□ -0.9
SOX2-OT-219ENST00000593330 SF3B2Q13435 895 aaKnown RBP9.43□□□□□ -0.9
SOX2-OT-219ENST00000593330 AKAP4Q5JQC9 854 aa9.43□□□□□ -0.9
SOX2-OT-219ENST00000593330 SHISA5Q8N114 240 aa9.43□□□□□ -0.9
SOX2-OT-219ENST00000593330 BCL7CQ8WUZ0 217 aaPredicted RBP9.43□□□□□ -0.9
SOX2-OT-219ENST00000593330 AP4E1Q9UPM8 1137 aa9.43□□□□□ -0.9
SOX2-OT-219ENST00000593330 A0A096LPE4 126 aa9.42□□□□□ -0.9
SOX2-OT-219ENST00000593330 A0A1W2PPZ6 126 aa9.42□□□□□ -0.9
SOX2-OT-219ENST00000593330 FARP2O94887 1054 aaPredicted RBP9.42□□□□□ -0.9
SOX2-OT-219ENST00000593330 PEAR1Q5VY43 1037 aaPredicted RBP9.42□□□□□ -0.9
SOX2-OT-219ENST00000593330 ATG4DQ86TL0 474 aaPredicted RBP9.42□□□□□ -0.9
SOX2-OT-219ENST00000593330 ZFYVE28Q9HCC9 887 aa9.42□□□□□ -0.9
SOX2-OT-219ENST00000593330 SERPINA10Q9UK55 444 aa9.42□□□□□ -0.9
SOX2-OT-219ENST00000593330 DBX1A6NMT0 343 aa9.41□□□□□ -0.9
SOX2-OT-219ENST00000593330 PAPLNO95428 1278 aa9.41□□□□□ -0.9
SOX2-OT-219ENST00000593330 CCNJLQ8IV13 435 aa9.41□□□□□ -0.9
SOX2-OT-219ENST00000593330 GSX1Q9H4S2 264 aaPredicted RBP9.41□□□□□ -0.9
SOX2-OT-219ENST00000593330 COL19A1Q14993 1142 aa9.4□□□□□ -0.9
SOX2-OT-219ENST00000593330 ZNF792Q3KQV3 632 aa9.4□□□□□ -0.9
SOX2-OT-219ENST00000593330 FAM105AQ9NUU6 356 aa9.4□□□□□ -0.9
SOX2-OT-219ENST00000593330 FOXD3Q9UJU5 478 aaPredicted RBP9.4□□□□□ -0.9
SOX2-OT-219ENST00000593330 AP3B2Q13367 1082 aa9.39□□□□□ -0.91
SOX2-OT-219ENST00000593330 SLC38A3Q99624 504 aa9.39□□□□□ -0.91
SOX2-OT-219ENST00000593330 LIN7BQ9HAP6 207 aa9.39□□□□□ -0.91
SOX2-OT-219ENST00000593330 SLAIN2Q9P270 581 aa9.39□□□□□ -0.91
SOX2-OT-219ENST00000593330 DAGLAQ9Y4D2 1042 aa9.39□□□□□ -0.91
SOX2-OT-219ENST00000593330 KSR1Q8IVT5 923 aa9.38□□□□□ -0.91
SOX2-OT-219ENST00000593330 NETO1Q8TDF5 533 aa9.38□□□□□ -0.91
SOX2-OT-219ENST00000593330 TMEM40Q8WWA1 233 aa9.38□□□□□ -0.91
SOX2-OT-219ENST00000593330 LATS2Q9NRM7 1088 aa9.38□□□□□ -0.91
SOX2-OT-219ENST00000593330 B3GALT4O96024 378 aa9.37□□□□□ -0.91
SOX2-OT-219ENST00000593330 ZNF423Q2M1K9 1284 aa9.37□□□□□ -0.91
SOX2-OT-219ENST00000593330 SEZ6L2Q6UXD5 910 aa9.37□□□□□ -0.91
SOX2-OT-219ENST00000593330 GALNT12Q8IXK2 581 aa9.37□□□□□ -0.91
SOX2-OT-219ENST00000593330 GJD3Q8N144 294 aa9.37□□□□□ -0.91
SOX2-OT-219ENST00000593330 C1GALT1Q9NS00 363 aa9.37□□□□□ -0.91
SOX2-OT-219ENST00000593330 VAV3Q9UKW4 847 aa9.37□□□□□ -0.91
SOX2-OT-219ENST00000593330 METTL12A8MUP2 240 aa9.36□□□□□ -0.91
SOX2-OT-219ENST00000593330 PDE3AQ14432 1141 aa9.36□□□□□ -0.91
SOX2-OT-219ENST00000593330 PIDD1Q9HB75 910 aa9.36□□□□□ -0.91
SOX2-OT-219ENST00000593330 AOC2O75106 756 aa9.35□□□□□ -0.91
SOX2-OT-219ENST00000593330 SLFN14P0C7P3 912 aa9.35□□□□□ -0.91
SOX2-OT-219ENST00000593330 FUT4P22083 530 aa9.35□□□□□ -0.91
SOX2-OT-219ENST00000593330 FKBP4Q02790 459 aaKnown RBP eCLIP9.35□□□□□ -0.91
SOX2-OT-219ENST00000593330 KRTAP19-4Q3LI73 84 aa9.35□□□□□ -0.91
SOX2-OT-219ENST00000593330 ZNF648Q5T619 568 aaPredicted RBP9.35□□□□□ -0.91
SOX2-OT-219ENST00000593330 ATXN3LQ9H3M9 355 aa9.35□□□□□ -0.91
SOX2-OT-219ENST00000593330 MKNK2Q9HBH9 465 aa9.35□□□□□ -0.91
SOX2-OT-219ENST00000593330 A0A1W2PP55 124 aa9.34□□□□□ -0.91
SOX2-OT-219ENST00000593330 SSFA2P28290 1259 aa9.34□□□□□ -0.91
SOX2-OT-219ENST00000593330 PTPN12Q05209 780 aaKnown RBP9.34□□□□□ -0.91
SOX2-OT-219ENST00000593330 FAM168AQ92567 244 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms