RNA–Protein interactions for RNA: ENST00000593251.5

RETREG3-212, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-212ENST00000593251 BICC1Q9H694 974 aaKnown RBP22.05■■□□□ 1.12
RETREG3-212ENST00000593251 MYH13Q9UKX3 1938 aa22.05■■□□□ 1.12
RETREG3-212ENST00000593251 CHAF1AQ13111 956 aaPredicted RBP22.04■■□□□ 1.12
RETREG3-212ENST00000593251 LRRC24Q50LG9 513 aa22.04■■□□□ 1.12
RETREG3-212ENST00000593251 CD99L2Q8TCZ2 262 aa22.04■■□□□ 1.12
RETREG3-212ENST00000593251 OPTNQ96CV9 577 aa22.04■■□□□ 1.12
RETREG3-212ENST00000593251 TMEM39BQ9GZU3 492 aa22.04■■□□□ 1.12
RETREG3-212ENST00000593251 MROH5Q6ZUA9 1318 aa22.04■■□□□ 1.12
RETREG3-212ENST00000593251 OTUD7BQ6GQQ9 843 aa22.03■■□□□ 1.12
RETREG3-212ENST00000593251 CNKSR2Q8WXI2 1034 aa22.03■■□□□ 1.12
RETREG3-212ENST00000593251 UTYO14607 1347 aa22.03■■□□□ 1.12
RETREG3-212ENST00000593251 RBBP6Q7Z6E9 1792 aaKnown RBP22.02■■□□□ 1.12
RETREG3-212ENST00000593251 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.02■■□□□ 1.12
RETREG3-212ENST00000593251 FBXO33Q7Z6M2 555 aa22.02■■□□□ 1.12
RETREG3-212ENST00000593251 VPS37DQ86XT2 251 aa22.02■■□□□ 1.12
RETREG3-212ENST00000593251 ANKRD44Q8N8A2 993 aa22.02■■□□□ 1.12
RETREG3-212ENST00000593251 ERO1AQ96HE7 468 aa22.02■■□□□ 1.12
RETREG3-212ENST00000593251 CACNB3P54284 484 aa22.01■■□□□ 1.11
RETREG3-212ENST00000593251 CAP1Q01518 475 aa22.01■■□□□ 1.11
RETREG3-212ENST00000593251 RABL6Q3YEC7 729 aaPredicted RBP22.01■■□□□ 1.11
RETREG3-212ENST00000593251 METTL24Q5JXM2 366 aa22.01■■□□□ 1.11
RETREG3-212ENST00000593251 KLHDC4Q8TBB5 520 aa22.01■■□□□ 1.11
RETREG3-212ENST00000593251 TESPA1A2RU30 521 aaPredicted RBP22■■□□□ 1.11
RETREG3-212ENST00000593251 ZNF316A6NFI3 1004 aaPredicted RBP22■■□□□ 1.11
RETREG3-212ENST00000593251 FRAT2O75474 233 aaPredicted RBP22■■□□□ 1.11
RETREG3-212ENST00000593251 MRPL50Q8N5N7 158 aaKnown RBP22■■□□□ 1.11
RETREG3-212ENST00000593251 MS4A4AQ96JQ5 239 aa22■■□□□ 1.11
RETREG3-212ENST00000593251 PTPN22Q9Y2R2 807 aa22■■□□□ 1.11
RETREG3-212ENST00000593251 POTEFA5A3E0 1075 aa21.99■■□□□ 1.11
RETREG3-212ENST00000593251 TNNI2P48788 182 aa21.99■■□□□ 1.11
RETREG3-212ENST00000593251 VGLL4Q14135 290 aa21.99■■□□□ 1.11
RETREG3-212ENST00000593251 VGLL2Q8N8G2 317 aa21.99■■□□□ 1.11
RETREG3-212ENST00000593251 ZNF521Q96K83 1311 aa21.99■■□□□ 1.11
RETREG3-212ENST00000593251 ZSWIM8A7E2V4 1837 aa21.99■■□□□ 1.11
RETREG3-212ENST00000593251 MKI67P46013 3256 aaKnown RBP21.98■■□□□ 1.11
RETREG3-212ENST00000593251 BCAMP50895 628 aa21.98■■□□□ 1.11
RETREG3-212ENST00000593251 MAP3K9P80192 1104 aa21.98■■□□□ 1.11
RETREG3-212ENST00000593251 SP3Q02447 781 aa21.98■■□□□ 1.11
RETREG3-212ENST00000593251 CAVIN4Q5BKX8 364 aa21.98■■□□□ 1.11
RETREG3-212ENST00000593251 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.98■■□□□ 1.11
RETREG3-212ENST00000593251 BRI3BPQ8WY22 251 aa21.98■■□□□ 1.11
RETREG3-212ENST00000593251 EFCC1Q9HA90 598 aa21.98■■□□□ 1.11
RETREG3-212ENST00000593251 CCL15-CCL14A0A0B4J2E2 113 aa21.97■■□□□ 1.11
RETREG3-212ENST00000593251 PDE8BO95263 885 aa21.97■■□□□ 1.11
RETREG3-212ENST00000593251 CCL15Q16663 113 aa21.97■■□□□ 1.11
RETREG3-212ENST00000593251 TEKT1Q969V4 418 aa21.97■■□□□ 1.11
RETREG3-212ENST00000593251 OTUD5Q96G74 571 aa21.97■■□□□ 1.11
RETREG3-212ENST00000593251 AK9Q5TCS8 1911 aa21.97■■□□□ 1.11
RETREG3-212ENST00000593251 TAF1CQ15572 869 aaPredicted RBP21.96■■□□□ 1.11
RETREG3-212ENST00000593251 TBC1D22AQ8WUA7 517 aa21.96■■□□□ 1.11
RETREG3-212ENST00000593251 CSADQ9Y600 493 aa21.96■■□□□ 1.11
RETREG3-212ENST00000593251 KIAA0100Q14667 2235 aaKnown RBP21.96■■□□□ 1.11
RETREG3-212ENST00000593251 HDLBPQ00341 1268 aaKnown RBP21.95■■□□□ 1.1
RETREG3-212ENST00000593251 INTS3Q68E01 1043 aaKnown RBP21.95■■□□□ 1.1
RETREG3-212ENST00000593251 BRCA2P51587 3418 aa21.94■■□□□ 1.1
RETREG3-212ENST00000593251 GTF2A2P52657 109 aa21.94■■□□□ 1.1
RETREG3-212ENST00000593251 FAM43AQ8N2R8 423 aa21.94■■□□□ 1.1
RETREG3-212ENST00000593251 USP44Q9H0E7 712 aa21.94■■□□□ 1.1
RETREG3-212ENST00000593251 PTPRCP08575 1304 aa21.93■■□□□ 1.1
RETREG3-212ENST00000593251 SSH1Q8WYL5 1049 aa21.93■■□□□ 1.1
RETREG3-212ENST00000593251 ZKSCAN4Q969J2 545 aaPredicted RBP21.93■■□□□ 1.1
RETREG3-212ENST00000593251 ZDHHC15Q96MV8 337 aa21.93■■□□□ 1.1
RETREG3-212ENST00000593251 ZFYVE28Q9HCC9 887 aa21.93■■□□□ 1.1
RETREG3-212ENST00000593251 SNCAIPQ9Y6H5 919 aa21.93■■□□□ 1.1
RETREG3-212ENST00000593251 FGFR2P21802 821 aa21.92■■□□□ 1.1
RETREG3-212ENST00000593251 APOBEC3HQ6NTF7 200 aaKnown RBP21.92■■□□□ 1.1
RETREG3-212ENST00000593251 ARMC5Q96C12 935 aa21.92■■□□□ 1.1
RETREG3-212ENST00000593251 WRNIP1Q96S55 665 aa21.92■■□□□ 1.1
RETREG3-212ENST00000593251 TMOD2Q9NZR1 351 aa21.92■■□□□ 1.1
RETREG3-212ENST00000593251 PCDH10Q9P2E7 1040 aa21.92■■□□□ 1.1
RETREG3-212ENST00000593251 SPDYE5A6NIY4 337 aa21.91■■□□□ 1.1
RETREG3-212ENST00000593251 IFIT1P09914 478 aaKnown RBP21.91■■□□□ 1.1
RETREG3-212ENST00000593251 PUM3Q15397 648 aaKnown RBP21.91■■□□□ 1.1
RETREG3-212ENST00000593251 EN2P19622 333 aaPredicted RBP21.9■■□□□ 1.1
RETREG3-212ENST00000593251 RFX5P48382 616 aaPredicted RBP21.9■■□□□ 1.1
RETREG3-212ENST00000593251 PTCH2Q9Y6C5 1203 aa21.9■■□□□ 1.1
RETREG3-212ENST00000593251 MAST3O60307 1309 aa21.89■■□□□ 1.1
RETREG3-212ENST00000593251 MIGA2Q7L4E1 593 aa21.89■■□□□ 1.09
RETREG3-212ENST00000593251 FAM83AQ86UY5 434 aa21.89■■□□□ 1.09
RETREG3-212ENST00000593251 MRIQ9BWK5 157 aa21.89■■□□□ 1.09
RETREG3-212ENST00000593251 KIF16BQ96L93 1317 aa21.88■■□□□ 1.09
RETREG3-212ENST00000593251 EYA2O00167 538 aa21.88■■□□□ 1.09
RETREG3-212ENST00000593251 IRF6O14896 467 aa21.88■■□□□ 1.09
RETREG3-212ENST00000593251 ZEB1P37275 1124 aaPredicted RBP21.88■■□□□ 1.09
RETREG3-212ENST00000593251 HHIPL2Q6UWX4 724 aa21.88■■□□□ 1.09
RETREG3-212ENST00000593251 ERO1BQ86YB8 467 aa21.88■■□□□ 1.09
RETREG3-212ENST00000593251 ARHGAP39Q9C0H5 1083 aa21.88■■□□□ 1.09
RETREG3-212ENST00000593251 BTBD19C9JJ37 291 aa21.87■■□□□ 1.09
RETREG3-212ENST00000593251 E9PSI1 815 aa21.87■■□□□ 1.09
RETREG3-212ENST00000593251 CETPP11597 493 aa21.87■■□□□ 1.09
RETREG3-212ENST00000593251 SLC5A1P13866 664 aa21.87■■□□□ 1.09
RETREG3-212ENST00000593251 FKBP1CQ5VVH2 108 aa21.87■■□□□ 1.09
RETREG3-212ENST00000593251 SUGT1Q9Y2Z0 365 aa21.87■■□□□ 1.09
RETREG3-212ENST00000593251 ECM2O94769 699 aaPredicted RBP21.86■■□□□ 1.09
RETREG3-212ENST00000593251 MYCP01106 439 aaPredicted RBP21.86■■□□□ 1.09
RETREG3-212ENST00000593251 SLC9C1Q4G0N8 1177 aa21.86■■□□□ 1.09
RETREG3-212ENST00000593251 ATG9AQ7Z3C6 839 aa21.86■■□□□ 1.09
RETREG3-212ENST00000593251 LPIN2Q92539 896 aa21.86■■□□□ 1.09
RETREG3-212ENST00000593251 ZNF333Q96JL9 665 aa21.86■■□□□ 1.09
RETREG3-212ENST00000593251 SIL1Q9H173 461 aa21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms