RNA–Protein interactions for RNA: ENST00000593160.2

CACNA1A-212, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,651 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-212ENST00000593160 PDRG1Q9NUG6 133 aa15.19■□□□□ 0.02
CACNA1A-212ENST00000593160 CTNNA3Q9UI47 895 aa15.19■□□□□ 0.02
CACNA1A-212ENST00000593160 H0YIN7 160 aa15.18■□□□□ 0.02
CACNA1A-212ENST00000593160 HSP90AA1P07900 732 aaKnown RBP15.18■□□□□ 0.02
CACNA1A-212ENST00000593160 CYP7A1P22680 504 aa15.18■□□□□ 0.02
CACNA1A-212ENST00000593160 NSUN4Q96CB9 384 aaKnown RBP15.18■□□□□ 0.02
CACNA1A-212ENST00000593160 NEK1Q96PY6 1258 aa15.18■□□□□ 0.02
CACNA1A-212ENST00000593160 ALDH8A1Q9H2A2 487 aaPredicted RBP15.18■□□□□ 0.02
CACNA1A-212ENST00000593160 ARMT1Q9H993 441 aa15.18■□□□□ 0.02
CACNA1A-212ENST00000593160 EPB41L4AQ9HCS5 686 aaPredicted RBP15.18■□□□□ 0.02
CACNA1A-212ENST00000593160 CD209Q9NNX6 404 aa15.18■□□□□ 0.02
CACNA1A-212ENST00000593160 CHMP5Q9NZZ3 219 aa15.18■□□□□ 0.02
CACNA1A-212ENST00000593160 ZNF646O15015 1829 aaPredicted RBP15.17■□□□□ 0.02
CACNA1A-212ENST00000593160 PRDX5P30044 214 aa15.17■□□□□ 0.02
CACNA1A-212ENST00000593160 CHRNA5P30532 468 aa15.17■□□□□ 0.02
CACNA1A-212ENST00000593160 ALX1Q15699 326 aa15.17■□□□□ 0.02
CACNA1A-212ENST00000593160 ZNF622Q969S3 477 aaKnown RBP eCLIP15.17■□□□□ 0.02
CACNA1A-212ENST00000593160 RIOK1Q9BRS2 568 aaKnown RBP15.17■□□□□ 0.02
CACNA1A-212ENST00000593160 CIZ1Q9ULV3 898 aaPredicted RBP15.17■□□□□ 0.02
CACNA1A-212ENST00000593160 E7EWF7 191 aa15.16■□□□□ 0.02
CACNA1A-212ENST00000593160 MECOMQ03112 1051 aa15.16■□□□□ 0.02
CACNA1A-212ENST00000593160 IMMTQ16891 758 aaKnown RBP15.16■□□□□ 0.02
CACNA1A-212ENST00000593160 NAA16Q6N069 864 aaPredicted RBP15.16■□□□□ 0.02
CACNA1A-212ENST00000593160 TMED8Q6PL24 325 aaPredicted RBP15.16■□□□□ 0.02
CACNA1A-212ENST00000593160 ZGPATQ8N5A5 531 aaKnown RBP15.16■□□□□ 0.02
CACNA1A-212ENST00000593160 MIGA1Q8NAN2 632 aa15.16■□□□□ 0.02
CACNA1A-212ENST00000593160 WDR66Q8TBY9 1149 aa15.16■□□□□ 0.02
CACNA1A-212ENST00000593160 LIMCH1Q9UPQ0 1083 aa15.16■□□□□ 0.02
CACNA1A-212ENST00000593160 JAG2Q9Y219 1238 aa15.16■□□□□ 0.02
CACNA1A-212ENST00000593160 LAMB1P07942 1786 aa15.16■□□□□ 0.02
CACNA1A-212ENST00000593160 C6orf229H3BNL8 230 aa15.16■□□□□ 0.02
CACNA1A-212ENST00000593160 IGSF3O75054 1194 aa15.16■□□□□ 0.02
CACNA1A-212ENST00000593160 LARGE1O95461 756 aa15.16■□□□□ 0.02
CACNA1A-212ENST00000593160 GNAT2P19087 354 aa15.16■□□□□ 0.02
CACNA1A-212ENST00000593160 TOB2Q14106 344 aaPredicted RBP15.16■□□□□ 0.02
CACNA1A-212ENST00000593160 MPNDQ8N594 471 aa15.16■□□□□ 0.02
CACNA1A-212ENST00000593160 TCEANC2Q96MN5 208 aa15.16■□□□□ 0.02
CACNA1A-212ENST00000593160 NBPF3Q9H094 633 aa15.16■□□□□ 0.02
CACNA1A-212ENST00000593160 GSG1L2A8MUP6 293 aa15.15■□□□□ 0.02
CACNA1A-212ENST00000593160 PATL2C9JE40 543 aaKnown RBP15.15■□□□□ 0.02
CACNA1A-212ENST00000593160 HMGB1P09429 215 aaKnown RBP15.15■□□□□ 0.02
CACNA1A-212ENST00000593160 HAND2P61296 217 aa15.15■□□□□ 0.02
CACNA1A-212ENST00000593160 DPP8Q6V1X1 898 aaPredicted RBP15.15■□□□□ 0.02
CACNA1A-212ENST00000593160 IFNL3Q8IZI9 196 aa15.15■□□□□ 0.02
CACNA1A-212ENST00000593160 INTS4Q96HW7 963 aaKnown RBP15.15■□□□□ 0.02
CACNA1A-212ENST00000593160 MAGEB6P1A0A0J9YX57 407 aa15.14■□□□□ 0.01
CACNA1A-212ENST00000593160 PRKAB2O43741 272 aa15.14■□□□□ 0.01
CACNA1A-212ENST00000593160 SPTY2D1Q68D10 685 aaPredicted RBP15.14■□□□□ 0.01
CACNA1A-212ENST00000593160 CNKSR1Q969H4 720 aa15.14■□□□□ 0.01
CACNA1A-212ENST00000593160 LARP6Q9BRS8 491 aaKnown RBP15.14■□□□□ 0.01
CACNA1A-212ENST00000593160 MYH2Q9UKX2 1941 aa15.14■□□□□ 0.01
CACNA1A-212ENST00000593160 FAM205AQ6ZU69 1335 aa15.13■□□□□ 0.01
CACNA1A-212ENST00000593160 EXOSC10Q01780 885 aaKnown RBP15.13■□□□□ 0.01
CACNA1A-212ENST00000593160 GRIK5Q16478 980 aa15.13■□□□□ 0.01
CACNA1A-212ENST00000593160 TBC1D10CQ8IV04 446 aa15.13■□□□□ 0.01
CACNA1A-212ENST00000593160 C7orf43Q8WVR3 580 aa15.13■□□□□ 0.01
CACNA1A-212ENST00000593160 TPCN1Q9ULQ1 816 aa15.13■□□□□ 0.01
CACNA1A-212ENST00000593160 SLC4A4Q9Y6R1 1079 aa15.13■□□□□ 0.01
CACNA1A-212ENST00000593160 BAZ2AQ9UIF9 1905 aaKnown RBP15.13■□□□□ 0.01
CACNA1A-212ENST00000593160 ZNF213O14771 459 aa15.12■□□□□ 0.01
CACNA1A-212ENST00000593160 APPP05067 770 aa15.12■□□□□ 0.01
CACNA1A-212ENST00000593160 DYNLL1P63167 89 aaKnown RBP15.12■□□□□ 0.01
CACNA1A-212ENST00000593160 ST3GAL1Q11201 340 aa15.12■□□□□ 0.01
CACNA1A-212ENST00000593160 ANKRD1Q15327 319 aa15.12■□□□□ 0.01
CACNA1A-212ENST00000593160 DHX32Q7L7V1 743 aaKnown RBP15.12■□□□□ 0.01
CACNA1A-212ENST00000593160 ZSCAN31Q96LW9 406 aaPredicted RBP15.12■□□□□ 0.01
CACNA1A-212ENST00000593160 AGXT2Q9BYV1 514 aa15.12■□□□□ 0.01
CACNA1A-212ENST00000593160 COA1Q9GZY4 146 aa15.12■□□□□ 0.01
CACNA1A-212ENST00000593160 CWC22Q9HCG8 908 aaKnown RBP15.12■□□□□ 0.01
CACNA1A-212ENST00000593160 SH2B1Q9NRF2 756 aaPredicted RBP15.12■□□□□ 0.01
CACNA1A-212ENST00000593160 CDK5RAP2Q96SN8 1893 aa15.12■□□□□ 0.01
CACNA1A-212ENST00000593160 BRCA1P38398 1863 aaKnown RBP15.12■□□□□ 0.01
CACNA1A-212ENST00000593160 LDHBP07195 334 aaKnown RBP15.12■□□□□ 0.01
CACNA1A-212ENST00000593160 ME3Q16798 604 aa15.12■□□□□ 0.01
CACNA1A-212ENST00000593160 DZIP1Q86YF9 867 aaKnown RBP15.12■□□□□ 0.01
CACNA1A-212ENST00000593160 MB21D2Q8IYB1 491 aaPredicted RBP15.12■□□□□ 0.01
CACNA1A-212ENST00000593160 NAPBQ9H115 298 aa15.12■□□□□ 0.01
CACNA1A-212ENST00000593160 DDX60LQ5H9U9 1706 aaKnown RBP15.11■□□□□ 0.01
CACNA1A-212ENST00000593160 RIMBP2O15034 1052 aa15.11■□□□□ 0.01
CACNA1A-212ENST00000593160 RAB3GAP1Q15042 981 aa15.11■□□□□ 0.01
CACNA1A-212ENST00000593160 Q6ZUG5 572 aa15.11■□□□□ 0.01
CACNA1A-212ENST00000593160 RTFDC1Q9BY42 306 aaPredicted RBP15.11■□□□□ 0.01
CACNA1A-212ENST00000593160 TMX4Q9H1E5 349 aaPredicted RBP15.11■□□□□ 0.01
CACNA1A-212ENST00000593160 NAV1Q8NEY1 1877 aa15.11■□□□□ 0.01
CACNA1A-212ENST00000593160 NFKBIBQ15653 356 aa15.1■□□□□ 0.01
CACNA1A-212ENST00000593160 SDR42E1Q8WUS8 393 aa15.1■□□□□ 0.01
CACNA1A-212ENST00000593160 EYA3Q99504 573 aa15.1■□□□□ 0.01
CACNA1A-212ENST00000593160 ANP32EQ9BTT0 268 aa15.1■□□□□ 0.01
CACNA1A-212ENST00000593160 NACAP1Q9BZK3 213 aa15.1■□□□□ 0.01
CACNA1A-212ENST00000593160 ZC3H12CQ9C0D7 883 aaKnown RBP15.1■□□□□ 0.01
CACNA1A-212ENST00000593160 SCN9AQ15858 1988 aa15.1■□□□□ 0.01
CACNA1A-212ENST00000593160 FOCADQ5VW36 1801 aa15.1■□□□□ 0.01
CACNA1A-212ENST00000593160 WDR19Q8NEZ3 1342 aa15.1■□□□□ 0.01
CACNA1A-212ENST00000593160 ZBTB7AO95365 584 aa15.09■□□□□ 0.01
CACNA1A-212ENST00000593160 TDO2P48775 406 aa15.09■□□□□ 0.01
CACNA1A-212ENST00000593160 FBXL16Q8N461 479 aa15.09■□□□□ 0.01
CACNA1A-212ENST00000593160 NCOA7Q8NI08 942 aa15.09■□□□□ 0.01
CACNA1A-212ENST00000593160 TBC1D22AQ8WUA7 517 aa15.09■□□□□ 0.01
CACNA1A-212ENST00000593160 UPF1Q92900 1129 aaKnown RBP eCLIP15.09■□□□□ 0.01
CACNA1A-212ENST00000593160 LRRC2Q9BYS8 371 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms