RNA–Protein interactions for RNA: ENST00000593128.5

CIRBP-243, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-243ENST00000593128 SOX10P56693 466 aa22.42■■□□□ 1.18
CIRBP-243ENST00000593128 MAP3K11Q16584 847 aa22.42■■□□□ 1.18
CIRBP-243ENST00000593128 MANSC4A6NHS7 340 aaPredicted RBP22.41■■□□□ 1.18
CIRBP-243ENST00000593128 EYA2O00167 538 aa22.41■■□□□ 1.18
CIRBP-243ENST00000593128 USP2O75604 605 aaPredicted RBP22.41■■□□□ 1.18
CIRBP-243ENST00000593128 SLC5A1P13866 664 aa22.41■■□□□ 1.18
CIRBP-243ENST00000593128 TNNI2P48788 182 aa22.41■■□□□ 1.18
CIRBP-243ENST00000593128 CACNB3P54284 484 aa22.41■■□□□ 1.18
CIRBP-243ENST00000593128 TEKT1Q969V4 418 aa22.41■■□□□ 1.18
CIRBP-243ENST00000593128 TMEM39BQ9GZU3 492 aa22.41■■□□□ 1.18
CIRBP-243ENST00000593128 OTOFQ9HC10 1997 aa22.4■■□□□ 1.18
CIRBP-243ENST00000593128 RFX5P48382 616 aaPredicted RBP22.4■■□□□ 1.18
CIRBP-243ENST00000593128 CDAN1Q8IWY9 1227 aa22.4■■□□□ 1.18
CIRBP-243ENST00000593128 TRMT2AQ8IZ69 625 aaKnown RBP22.4■■□□□ 1.18
CIRBP-243ENST00000593128 API5Q9BZZ5 524 aaKnown RBP22.4■■□□□ 1.18
CIRBP-243ENST00000593128 ELP3Q9H9T3 547 aa22.4■■□□□ 1.18
CIRBP-243ENST00000593128 ZBTB48P10074 688 aaPredicted RBP22.39■■□□□ 1.17
CIRBP-243ENST00000593128 ANKRD13AQ8IZ07 590 aa22.39■■□□□ 1.17
CIRBP-243ENST00000593128 R3HDMLQ9H3Y0 253 aa22.39■■□□□ 1.17
CIRBP-243ENST00000593128 LRRFIP2Q9Y608 721 aaKnown RBP22.39■■□□□ 1.17
CIRBP-243ENST00000593128 CCER2I3L3R5 266 aa22.38■■□□□ 1.17
CIRBP-243ENST00000593128 IFNL1Q8IU54 200 aa22.38■■□□□ 1.17
CIRBP-243ENST00000593128 TMOD2Q9NZR1 351 aa22.38■■□□□ 1.17
CIRBP-243ENST00000593128 FKTNO75072 461 aa22.37■■□□□ 1.17
CIRBP-243ENST00000593128 ALDH1A1P00352 501 aa22.37■■□□□ 1.17
CIRBP-243ENST00000593128 CT47B1P0C2W7 299 aaPredicted RBP22.37■■□□□ 1.17
CIRBP-243ENST00000593128 FGFR2P21802 821 aa22.37■■□□□ 1.17
CIRBP-243ENST00000593128 RGS19P49795 217 aa22.37■■□□□ 1.17
CIRBP-243ENST00000593128 LPIN2Q92539 896 aa22.37■■□□□ 1.17
CIRBP-243ENST00000593128 HPS5Q9UPZ3 1129 aa22.37■■□□□ 1.17
CIRBP-243ENST00000593128 MAST3O60307 1309 aa22.36■■□□□ 1.17
CIRBP-243ENST00000593128 GJA5P36382 358 aa22.36■■□□□ 1.17
CIRBP-243ENST00000593128 INHBEP58166 350 aa22.36■■□□□ 1.17
CIRBP-243ENST00000593128 ATP2B3Q16720 1220 aa22.36■■□□□ 1.17
CIRBP-243ENST00000593128 OPTNQ96CV9 577 aa22.36■■□□□ 1.17
CIRBP-243ENST00000593128 CEP126Q9P2H0 1117 aa22.36■■□□□ 1.17
CIRBP-243ENST00000593128 IGF2BP3O00425 579 aaKnown RBP eCLIP22.35■■□□□ 1.17
CIRBP-243ENST00000593128 HDLBPQ00341 1268 aaKnown RBP22.35■■□□□ 1.17
CIRBP-243ENST00000593128 ATG9AQ7Z3C6 839 aa22.35■■□□□ 1.17
CIRBP-243ENST00000593128 TEPSINQ96N21 525 aa22.35■■□□□ 1.17
CIRBP-243ENST00000593128 PA2G4Q9UQ80 394 aaKnown RBP22.35■■□□□ 1.17
CIRBP-243ENST00000593128 KIF16BQ96L93 1317 aa22.34■■□□□ 1.17
CIRBP-243ENST00000593128 UNCXA6NJT0 531 aa22.34■■□□□ 1.17
CIRBP-243ENST00000593128 RARSP54136 660 aaKnown RBP22.34■■□□□ 1.17
CIRBP-243ENST00000593128 PKN2Q16513 984 aaKnown RBP22.34■■□□□ 1.17
CIRBP-243ENST00000593128 ZDHHC15Q96MV8 337 aa22.34■■□□□ 1.17
CIRBP-243ENST00000593128 MEIS3Q99687 375 aa22.34■■□□□ 1.17
CIRBP-243ENST00000593128 HDAC5Q9UQL6 1122 aa22.34■■□□□ 1.17
CIRBP-243ENST00000593128 CSADQ9Y600 493 aa22.34■■□□□ 1.17
CIRBP-243ENST00000593128 OTUD7BQ6GQQ9 843 aa22.33■■□□□ 1.17
CIRBP-243ENST00000593128 WDR66Q8TBY9 1149 aa22.33■■□□□ 1.17
CIRBP-243ENST00000593128 CNKSR2Q8WXI2 1034 aa22.33■■□□□ 1.17
CIRBP-243ENST00000593128 CIAO1O76071 339 aa22.32■■□□□ 1.16
CIRBP-243ENST00000593128 MAP3K9P80192 1104 aa22.32■■□□□ 1.16
CIRBP-243ENST00000593128 VGLL4Q14135 290 aa22.32■■□□□ 1.16
CIRBP-243ENST00000593128 GNL3LQ9NVN8 582 aaKnown RBP22.32■■□□□ 1.16
CIRBP-243ENST00000593128 LAMB1P07942 1786 aa22.31■■□□□ 1.16
CIRBP-243ENST00000593128 NOM1Q5C9Z4 860 aaKnown RBP22.31■■□□□ 1.16
CIRBP-243ENST00000593128 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.31■■□□□ 1.16
CIRBP-243ENST00000593128 FRAT1Q92837 279 aaPredicted RBP22.31■■□□□ 1.16
CIRBP-243ENST00000593128 OTUD5Q96G74 571 aa22.31■■□□□ 1.16
CIRBP-243ENST00000593128 CFHR5Q9BXR6 569 aa22.31■■□□□ 1.16
CIRBP-243ENST00000593128 SUGT1Q9Y2Z0 365 aa22.31■■□□□ 1.16
CIRBP-243ENST00000593128 AK9Q5TCS8 1911 aa22.31■■□□□ 1.16
CIRBP-243ENST00000593128 IL15P40933 162 aaPredicted RBP22.3■■□□□ 1.16
CIRBP-243ENST00000593128 CRHR2Q13324 411 aa22.3■■□□□ 1.16
CIRBP-243ENST00000593128 APOBEC3HQ6NTF7 200 aaKnown RBP22.3■■□□□ 1.16
CIRBP-243ENST00000593128 TRIM17Q9Y577 477 aa22.3■■□□□ 1.16
CIRBP-243ENST00000593128 TCP10Q12799 353 aa22.29■■□□□ 1.16
CIRBP-243ENST00000593128 DIXDC1Q155Q3 683 aa22.29■■□□□ 1.16
CIRBP-243ENST00000593128 FBXO46Q6PJ61 603 aaPredicted RBP22.29■■□□□ 1.16
CIRBP-243ENST00000593128 HHIPL2Q6UWX4 724 aa22.29■■□□□ 1.16
CIRBP-243ENST00000593128 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.29■■□□□ 1.167e-15■□□□□ 9.7
CIRBP-243ENST00000593128 WRNIP1Q96S55 665 aa22.29■■□□□ 1.16
CIRBP-243ENST00000593128 FBXO3Q9UK99 471 aa22.29■■□□□ 1.16
CIRBP-243ENST00000593128 CCL15-CCL14A0A0B4J2E2 113 aa22.28■■□□□ 1.16
CIRBP-243ENST00000593128 SRGAP3O43295 1099 aa22.28■■□□□ 1.16
CIRBP-243ENST00000593128 LDHBP07195 334 aaKnown RBP22.28■■□□□ 1.16
CIRBP-243ENST00000593128 PRDX5P30044 214 aa22.28■■□□□ 1.16
CIRBP-243ENST00000593128 ADORA1P30542 326 aa22.28■■□□□ 1.16
CIRBP-243ENST00000593128 PHKA1P46020 1223 aa22.28■■□□□ 1.16
CIRBP-243ENST00000593128 CCL15Q16663 113 aa22.28■■□□□ 1.16
CIRBP-243ENST00000593128 PTPN18Q99952 460 aa22.28■■□□□ 1.16
CIRBP-243ENST00000593128 MRIQ9BWK5 157 aa22.28■■□□□ 1.16
CIRBP-243ENST00000593128 GNAI3P08754 354 aa22.27■■□□□ 1.16
CIRBP-243ENST00000593128 MIGA2Q7L4E1 593 aa22.27■■□□□ 1.16
CIRBP-243ENST00000593128 FAM83AQ86UY5 434 aa22.27■■□□□ 1.16
CIRBP-243ENST00000593128 CD99L2Q8TCZ2 262 aa22.27■■□□□ 1.16
CIRBP-243ENST00000593128 ZKSCAN4Q969J2 545 aaPredicted RBP22.27■■□□□ 1.16
CIRBP-243ENST00000593128 HOOK2Q96ED9 719 aa22.27■■□□□ 1.16
CIRBP-243ENST00000593128 DAGLAQ9Y4D2 1042 aa22.27■■□□□ 1.16
CIRBP-243ENST00000593128 DCAF15Q66K64 600 aa22.26■■□□□ 1.15
CIRBP-243ENST00000593128 CLUAP1Q96AJ1 413 aa22.26■■□□□ 1.15
CIRBP-243ENST00000593128 DENND2AQ9ULE3 1009 aa22.26■■□□□ 1.15
CIRBP-243ENST00000593128 TNNQ9UQP3 1299 aa22.26■■□□□ 1.15
CIRBP-243ENST00000593128 IPO8O15397 1037 aaKnown RBP22.25■■□□□ 1.15
CIRBP-243ENST00000593128 BCAR3O75815 825 aa22.25■■□□□ 1.15
CIRBP-243ENST00000593128 GTF2A2P52657 109 aa22.25■■□□□ 1.15
CIRBP-243ENST00000593128 TIMM10P62072 90 aa22.25■■□□□ 1.15
CIRBP-243ENST00000593128 INTS3Q68E01 1043 aaKnown RBP22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms