RNA–Protein interactions for RNA: ENST00000592942.1

TRIM47-206, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 793 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-206ENST00000592942 PDS5AQ29RF7 1337 aaKnown RBP18.84■□□□□ 0.61
TRIM47-206ENST00000592942 PITPNM2Q9BZ72 1349 aa18.84■□□□□ 0.61
TRIM47-206ENST00000592942 PRDX5P30044 214 aa18.84■□□□□ 0.61
TRIM47-206ENST00000592942 MCAMP43121 646 aa18.84■□□□□ 0.61
TRIM47-206ENST00000592942 CRKP46108 304 aa18.84■□□□□ 0.61
TRIM47-206ENST00000592942 HDLBPQ00341 1268 aaKnown RBP18.84■□□□□ 0.61
TRIM47-206ENST00000592942 PI16Q6UXB8 463 aa18.84■□□□□ 0.61
TRIM47-206ENST00000592942 KIF1BPQ96EK5 621 aa18.84■□□□□ 0.61
TRIM47-206ENST00000592942 ZNF512BQ96KM6 892 aaPredicted RBP18.84■□□□□ 0.61
TRIM47-206ENST00000592942 GORABQ5T7V8 394 aa18.83■□□□□ 0.6
TRIM47-206ENST00000592942 CREBZFQ9NS37 354 aa18.83■□□□□ 0.6
TRIM47-206ENST00000592942 TMEM88BA6NKF7 163 aa18.82■□□□□ 0.6
TRIM47-206ENST00000592942 APBB1O00213 710 aa18.82■□□□□ 0.6
TRIM47-206ENST00000592942 AACSQ86V21 672 aa18.82■□□□□ 0.6
TRIM47-206ENST00000592942 SPATA5Q8NB90 893 aa18.82■□□□□ 0.6
TRIM47-206ENST00000592942 EXOC6Q8TAG9 804 aa18.82■□□□□ 0.6
TRIM47-206ENST00000592942 MYH13Q9UKX3 1938 aa18.81■□□□□ 0.6
TRIM47-206ENST00000592942 UQCRFS1P1P0C7P4 283 aa18.81■□□□□ 0.6
TRIM47-206ENST00000592942 CCDC158Q5M9N0 1113 aa18.81■□□□□ 0.6
TRIM47-206ENST00000592942 APOBEC3HQ6NTF7 200 aaKnown RBP18.81■□□□□ 0.6
TRIM47-206ENST00000592942 HHIPL2Q6UWX4 724 aa18.81■□□□□ 0.6
TRIM47-206ENST00000592942 TBC1D9Q6ZT07 1266 aa18.81■□□□□ 0.6
TRIM47-206ENST00000592942 SULF1Q8IWU6 871 aa18.81■□□□□ 0.6
TRIM47-206ENST00000592942 CELF2O95319 508 aaKnown RBP18.8■□□□□ 0.6
TRIM47-206ENST00000592942 RBM5P52756 815 aaKnown RBP eCLIP18.8■□□□□ 0.6
TRIM47-206ENST00000592942 TTC39AQ5SRH9 613 aa18.8■□□□□ 0.6
TRIM47-206ENST00000592942 PRAMEF18Q5VWM3 479 aa18.8■□□□□ 0.6
TRIM47-206ENST00000592942 ZNF384Q8TF68 577 aa18.8■□□□□ 0.6
TRIM47-206ENST00000592942 ZDHHC15Q96MV8 337 aa18.8■□□□□ 0.6
TRIM47-206ENST00000592942 TDRD3Q9H7E2 651 aaKnown RBP18.8■□□□□ 0.6
TRIM47-206ENST00000592942 AKAP11Q9UKA4 1901 aa18.8■□□□□ 0.6
TRIM47-206ENST00000592942 CLRN2A0PK11 232 aa18.79■□□□□ 0.6
TRIM47-206ENST00000592942 SMARCA5O60264 1052 aaPredicted RBP18.79■□□□□ 0.6
TRIM47-206ENST00000592942 LDHBP07195 334 aaKnown RBP18.79■□□□□ 0.6
TRIM47-206ENST00000592942 DIXDC1Q155Q3 683 aa18.79■□□□□ 0.6
TRIM47-206ENST00000592942 SPDYE2Q495Y8 402 aa18.79■□□□□ 0.6
TRIM47-206ENST00000592942 CLASRPQ8N2M8 674 aaKnown RBP18.79■□□□□ 0.6
TRIM47-206ENST00000592942 TEKT1Q969V4 418 aa18.79■□□□□ 0.6
TRIM47-206ENST00000592942 SNRKQ9NRH2 765 aa18.79■□□□□ 0.6
TRIM47-206ENST00000592942 ZNF70Q9UC06 446 aaPredicted RBP18.79■□□□□ 0.6
TRIM47-206ENST00000592942 TRPM7Q96QT4 1865 aa18.79■□□□□ 0.6
TRIM47-206ENST00000592942 CYP2E1P05181 493 aaPredicted RBP18.78■□□□□ 0.6
TRIM47-206ENST00000592942 AAMPQ13685 434 aa18.78■□□□□ 0.6
TRIM47-206ENST00000592942 ZGPATQ8N5A5 531 aaKnown RBP18.78■□□□□ 0.6
TRIM47-206ENST00000592942 CDCA5Q96FF9 252 aa18.78■□□□□ 0.6
TRIM47-206ENST00000592942 ABCF2Q9UG63 623 aa18.78■□□□□ 0.6
TRIM47-206ENST00000592942 CAPN15O75808 1086 aa18.77■□□□□ 0.6
TRIM47-206ENST00000592942 CENPBP07199 599 aaPredicted RBP18.77■□□□□ 0.6
TRIM47-206ENST00000592942 ZAP70P43403 619 aa18.77■□□□□ 0.6
TRIM47-206ENST00000592942 APOBEC3FQ8IUX4 373 aaKnown RBP18.77■□□□□ 0.6
TRIM47-206ENST00000592942 TNS4Q8IZW8 715 aa18.77■□□□□ 0.6
TRIM47-206ENST00000592942 FAM163AQ96GL9 167 aaPredicted RBP18.77■□□□□ 0.6
TRIM47-206ENST00000592942 LRRCC1Q9C099 1032 aa18.77■□□□□ 0.6
TRIM47-206ENST00000592942 DEFB129Q9H1M3 183 aa18.77■□□□□ 0.6
TRIM47-206ENST00000592942 DAGLAQ9Y4D2 1042 aa18.77■□□□□ 0.6
TRIM47-206ENST00000592942 MAST3O60307 1309 aa18.76■□□□□ 0.59
TRIM47-206ENST00000592942 MECOMQ03112 1051 aa18.76■□□□□ 0.59
TRIM47-206ENST00000592942 HDAC1Q13547 482 aaPredicted RBP18.76■□□□□ 0.59
TRIM47-206ENST00000592942 ZNF408Q9H9D4 720 aa18.76■□□□□ 0.59
TRIM47-206ENST00000592942 TLL2Q9Y6L7 1015 aa18.76■□□□□ 0.59
TRIM47-206ENST00000592942 RASSF10A6NK89 507 aa18.75■□□□□ 0.59
TRIM47-206ENST00000592942 MYO1BO43795 1136 aa18.75■□□□□ 0.59
TRIM47-206ENST00000592942 IFIT2P09913 472 aaKnown RBP18.75■□□□□ 0.59
TRIM47-206ENST00000592942 SPTY2D1Q68D10 685 aaPredicted RBP18.75■□□□□ 0.59
TRIM47-206ENST00000592942 ERICH6Q7L0X2 663 aa18.75■□□□□ 0.59
TRIM47-206ENST00000592942 SAPCD2Q86UD0 394 aa18.75■□□□□ 0.59
TRIM47-206ENST00000592942 NSUN4Q96CB9 384 aaKnown RBP18.75■□□□□ 0.59
TRIM47-206ENST00000592942 NDUFB9Q9Y6M9 179 aa18.75■□□□□ 0.59
TRIM47-206ENST00000592942 GAKO14976 1311 aa18.74■□□□□ 0.59
TRIM47-206ENST00000592942 ECM29Q5VYK3 1845 aa18.74■□□□□ 0.59
TRIM47-206ENST00000592942 IRX6P78412 446 aaPredicted RBP18.74■□□□□ 0.59
TRIM47-206ENST00000592942 RASA3Q14644 834 aa18.74■□□□□ 0.59
TRIM47-206ENST00000592942 CDC42EP5Q6NZY7 148 aa18.74■□□□□ 0.59
TRIM47-206ENST00000592942 ANTXR1Q9H6X2 564 aa18.74■□□□□ 0.59
TRIM47-206ENST00000592942 VEZTQ9HBM0 779 aa18.74■□□□□ 0.59
TRIM47-206ENST00000592942 PIH1D3Q9NQM4 214 aaKnown RBP18.74■□□□□ 0.59
TRIM47-206ENST00000592942 CNTNAP1P78357 1384 aa18.73■□□□□ 0.59
TRIM47-206ENST00000592942 IGHDP01880 384 aa18.73■□□□□ 0.59
TRIM47-206ENST00000592942 CACNB3P54284 484 aa18.73■□□□□ 0.59
TRIM47-206ENST00000592942 DEFB115Q30KQ5 88 aa18.73■□□□□ 0.59
TRIM47-206ENST00000592942 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.73■□□□□ 0.59
TRIM47-206ENST00000592942 BCL11AQ9H165 835 aa18.73■□□□□ 0.59
TRIM47-206ENST00000592942 GBA2Q9HCG7 927 aaPredicted RBP18.73■□□□□ 0.59
TRIM47-206ENST00000592942 MKRN1Q9UHC7 482 aaKnown RBP18.73■□□□□ 0.59
TRIM47-206ENST00000592942 TCP10L2B9ZVM9 353 aa18.72■□□□□ 0.59
TRIM47-206ENST00000592942 DZIP1Q86YF9 867 aaKnown RBP18.72■□□□□ 0.59
TRIM47-206ENST00000592942 TEPSINQ96N21 525 aa18.72■□□□□ 0.59
TRIM47-206ENST00000592942 LRP2BPQ9P2M1 347 aa18.72■□□□□ 0.59
TRIM47-206ENST00000592942 ABT1Q9ULW3 272 aaKnown RBP18.72■□□□□ 0.59
TRIM47-206ENST00000592942 MYH2Q9UKX2 1941 aa18.71■□□□□ 0.59
TRIM47-206ENST00000592942 GPR75-ASB3A0A0A6YYF3 556 aa18.71■□□□□ 0.59
TRIM47-206ENST00000592942 ATP5JP18859 108 aa18.71■□□□□ 0.59
TRIM47-206ENST00000592942 VEGFBP49765 207 aa18.71■□□□□ 0.59
TRIM47-206ENST00000592942 NBPF12Q5TAG4 269 aaPredicted RBP18.71■□□□□ 0.59
TRIM47-206ENST00000592942 FKBP1CQ5VVH2 108 aa18.71■□□□□ 0.59
TRIM47-206ENST00000592942 MOB2Q70IA6 237 aa18.71■□□□□ 0.59
TRIM47-206ENST00000592942 CDAN1Q8IWY9 1227 aa18.71■□□□□ 0.59
TRIM47-206ENST00000592942 RAI14Q9P0K7 980 aa18.71■□□□□ 0.59
TRIM47-206ENST00000592942 PPP2R3BQ9Y5P8 575 aa18.71■□□□□ 0.59
TRIM47-206ENST00000592942 MYO5AQ9Y4I1 1855 aaKnown RBP18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms