RNA–Protein interactions for RNA: ENST00000591600.1

APOC4-201, Transcript of apolipoprotein C4, humanhuman

TSL 3 BASIC

Gene APOC4, Length 348 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4-201ENST00000591600 SSH1Q8WYL5 1049 aa19.3■□□□□ 0.68
APOC4-201ENST00000591600 MRIQ9BWK5 157 aa19.3■□□□□ 0.68
APOC4-201ENST00000591600 R3HDMLQ9H3Y0 253 aa19.3■□□□□ 0.68
APOC4-201ENST00000591600 TDRD3Q9H7E2 651 aaKnown RBP19.3■□□□□ 0.68
APOC4-201ENST00000591600 KIF16BQ96L93 1317 aa19.29■□□□□ 0.68
APOC4-201ENST00000591600 CRKP46108 304 aa19.29■□□□□ 0.68
APOC4-201ENST00000591600 SOX10P56693 466 aa19.29■□□□□ 0.68
APOC4-201ENST00000591600 SLFN5Q08AF3 891 aa19.29■□□□□ 0.68
APOC4-201ENST00000591600 METTL24Q5JXM2 366 aa19.29■□□□□ 0.68
APOC4-201ENST00000591600 TEPSINQ96N21 525 aa19.29■□□□□ 0.68
APOC4-201ENST00000591600 TESPA1A2RU30 521 aaPredicted RBP19.28■□□□□ 0.68
APOC4-201ENST00000591600 ALDH1L2Q3SY69 923 aa19.28■□□□□ 0.68
APOC4-201ENST00000591600 IGF2BP3O00425 579 aaKnown RBP eCLIP19.27■□□□□ 0.68
APOC4-201ENST00000591600 TNNI2P48788 182 aa19.27■□□□□ 0.68
APOC4-201ENST00000591600 OTUD7BQ6GQQ9 843 aa19.27■□□□□ 0.68
APOC4-201ENST00000591600 SUGT1Q9Y2Z0 365 aa19.27■□□□□ 0.68
APOC4-201ENST00000591600 SLC34A2O95436 690 aa19.26■□□□□ 0.67
APOC4-201ENST00000591600 FGFR2P21802 821 aa19.26■□□□□ 0.67
APOC4-201ENST00000591600 FRAT2O75474 233 aaPredicted RBP19.25■□□□□ 0.67
APOC4-201ENST00000591600 GJA5P36382 358 aa19.25■□□□□ 0.67
APOC4-201ENST00000591600 PUM3Q15397 648 aaKnown RBP19.25■□□□□ 0.67
APOC4-201ENST00000591600 GRIK5Q16478 980 aa19.25■□□□□ 0.67
APOC4-201ENST00000591600 KLHDC4Q8TBB5 520 aa19.25■□□□□ 0.67
APOC4-201ENST00000591600 TEKT1Q969V4 418 aa19.25■□□□□ 0.67
APOC4-201ENST00000591600 IQSEC3Q9UPP2 1182 aaPredicted RBP19.25■□□□□ 0.67
APOC4-201ENST00000591600 TCP10L2B9ZVM9 353 aa19.24■□□□□ 0.67
APOC4-201ENST00000591600 IFIT1P09914 478 aaKnown RBP19.24■□□□□ 0.67
APOC4-201ENST00000591600 RFX5P48382 616 aaPredicted RBP19.24■□□□□ 0.67
APOC4-201ENST00000591600 BCAMP50895 628 aa19.24■□□□□ 0.67
APOC4-201ENST00000591600 FKBP1CQ5VVH2 108 aa19.24■□□□□ 0.67
APOC4-201ENST00000591600 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.24■□□□□ 0.67
APOC4-201ENST00000591600 TRMT2AQ8IZ69 625 aaKnown RBP19.24■□□□□ 0.67
APOC4-201ENST00000591600 ZDHHC15Q96MV8 337 aa19.24■□□□□ 0.67
APOC4-201ENST00000591600 PTPN18Q99952 460 aa19.24■□□□□ 0.67
APOC4-201ENST00000591600 TMEM39BQ9GZU3 492 aa19.24■□□□□ 0.67
APOC4-201ENST00000591600 MAST3O60307 1309 aa19.24■□□□□ 0.67
APOC4-201ENST00000591600 EYA2O00167 538 aa19.23■□□□□ 0.67
APOC4-201ENST00000591600 CT47B1P0C2W7 299 aaPredicted RBP19.23■□□□□ 0.67
APOC4-201ENST00000591600 CHAF1AQ13111 956 aaPredicted RBP19.23■□□□□ 0.67
APOC4-201ENST00000591600 HHIPL2Q6UWX4 724 aa19.23■□□□□ 0.67
APOC4-201ENST00000591600 FAM83AQ86UY5 434 aa19.23■□□□□ 0.67
APOC4-201ENST00000591600 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.23■□□□□ 0.67
APOC4-201ENST00000591600 OPTNQ96CV9 577 aa19.23■□□□□ 0.67
APOC4-201ENST00000591600 MS4A4AQ96JQ5 239 aa19.23■□□□□ 0.67
APOC4-201ENST00000591600 FBXO3Q9UK99 471 aa19.23■□□□□ 0.67
APOC4-201ENST00000591600 RBBP6Q7Z6E9 1792 aaKnown RBP19.23■□□□□ 0.67
APOC4-201ENST00000591600 MAP3K9P80192 1104 aa19.22■□□□□ 0.67
APOC4-201ENST00000591600 CRHR2Q13324 411 aa19.22■□□□□ 0.67
APOC4-201ENST00000591600 CDAN1Q8IWY9 1227 aa19.22■□□□□ 0.67
APOC4-201ENST00000591600 LPIN2Q92539 896 aa19.22■□□□□ 0.67
APOC4-201ENST00000591600 ELP3Q9H9T3 547 aa19.22■□□□□ 0.67
APOC4-201ENST00000591600 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.22■□□□□ 0.67
APOC4-201ENST00000591600 VGLL4Q14135 290 aa19.21■□□□□ 0.67
APOC4-201ENST00000591600 OTOP1Q7RTM1 612 aa19.21■□□□□ 0.67
APOC4-201ENST00000591600 HOOK2Q96ED9 719 aa19.21■□□□□ 0.67
APOC4-201ENST00000591600 ERO1AQ96HE7 468 aa19.21■□□□□ 0.67
APOC4-201ENST00000591600 TRIM17Q9Y577 477 aa19.21■□□□□ 0.67
APOC4-201ENST00000591600 APOBEC3HQ6NTF7 200 aaKnown RBP19.2■□□□□ 0.66
APOC4-201ENST00000591600 ATG9AQ7Z3C6 839 aa19.2■□□□□ 0.66
APOC4-201ENST00000591600 WDR66Q8TBY9 1149 aa19.2■□□□□ 0.66
APOC4-201ENST00000591600 CDCA7LQ96GN5 454 aa19.2■□□□□ 0.66
APOC4-201ENST00000591600 SMC4Q9NTJ3 1288 aa19.2■□□□□ 0.66
APOC4-201ENST00000591600 TMOD2Q9NZR1 351 aa19.2■□□□□ 0.66
APOC4-201ENST00000591600 CSADQ9Y600 493 aa19.2■□□□□ 0.66
APOC4-201ENST00000591600 ZBTB22O15209 634 aa19.19■□□□□ 0.66
APOC4-201ENST00000591600 CIAO1O76071 339 aa19.19■□□□□ 0.66
APOC4-201ENST00000591600 SLC5A1P13866 664 aa19.19■□□□□ 0.66
APOC4-201ENST00000591600 GTF2A2P52657 109 aa19.19■□□□□ 0.66
APOC4-201ENST00000591600 INTS3Q68E01 1043 aaKnown RBP19.19■□□□□ 0.66
APOC4-201ENST00000591600 AK9Q5TCS8 1911 aa19.19■□□□□ 0.66
APOC4-201ENST00000591600 RPAP1Q9BWH6 1393 aaPredicted RBP19.19■□□□□ 0.66
APOC4-201ENST00000591600 HTTP42858 3142 aa19.18■□□□□ 0.66
APOC4-201ENST00000591600 SP3Q02447 781 aa19.18■□□□□ 0.66
APOC4-201ENST00000591600 HDAC5Q9UQL6 1122 aa19.18■□□□□ 0.66
APOC4-201ENST00000591600 PTPN22Q9Y2R2 807 aa19.18■□□□□ 0.66
APOC4-201ENST00000591600 SPDYE5A6NIY4 337 aa19.17■□□□□ 0.66
APOC4-201ENST00000591600 UBTFL1P0CB47 393 aaPredicted RBP19.17■□□□□ 0.66
APOC4-201ENST00000591600 CACNB3P54284 484 aa19.17■□□□□ 0.66
APOC4-201ENST00000591600 BRI3BPQ8WY22 251 aa19.17■□□□□ 0.66
APOC4-201ENST00000591600 CCL15-CCL14A0A0B4J2E2 113 aa19.16■□□□□ 0.66
APOC4-201ENST00000591600 CCL15Q16663 113 aa19.16■□□□□ 0.66
APOC4-201ENST00000591600 PRPF38BQ5VTL8 546 aaKnown RBP19.16■□□□□ 0.66
APOC4-201ENST00000591600 ERO1BQ86YB8 467 aa19.16■□□□□ 0.66
APOC4-201ENST00000591600 CD99L2Q8TCZ2 262 aa19.16■□□□□ 0.66
APOC4-201ENST00000591600 CNKSR2Q8WXI2 1034 aa19.16■□□□□ 0.66
APOC4-201ENST00000591600 ZCCHC17Q9NP64 241 aaKnown RBP19.16■□□□□ 0.66
APOC4-201ENST00000591600 MYH2Q9UKX2 1941 aa19.15■□□□□ 0.66
APOC4-201ENST00000591600 CENPFP49454 3210 aa19.15■□□□□ 0.66
APOC4-201ENST00000591600 DCAF15Q66K64 600 aa19.15■□□□□ 0.66
APOC4-201ENST00000591600 OTUD5Q96G74 571 aa19.15■□□□□ 0.66
APOC4-201ENST00000591600 API5Q9BZZ5 524 aaKnown RBP19.15■□□□□ 0.66
APOC4-201ENST00000591600 EFCC1Q9HA90 598 aa19.15■□□□□ 0.66
APOC4-201ENST00000591600 ZFYVE28Q9HCC9 887 aa19.15■□□□□ 0.66
APOC4-201ENST00000591600 CEP126Q9P2H0 1117 aa19.15■□□□□ 0.66
APOC4-201ENST00000591600 NOB1Q9ULX3 412 aaKnown RBP19.15■□□□□ 0.66
APOC4-201ENST00000591600 SNCAIPQ9Y6H5 919 aa19.15■□□□□ 0.66
APOC4-201ENST00000591600 SEMA3EO15041 775 aa19.14■□□□□ 0.65
APOC4-201ENST00000591600 IL15P40933 162 aaPredicted RBP19.14■□□□□ 0.65
APOC4-201ENST00000591600 ARHGEF6Q15052 776 aa19.14■□□□□ 0.65
APOC4-201ENST00000591600 FAM151AQ8WW52 585 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms