RNA–Protein interactions for RNA: ENST00000591309.5

ERCC2-212, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 4

Gene ERCC2, Length 557 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-212ENST00000591309 ABCF2Q9UG63 623 aa25.36■■□□□ 1.65
ERCC2-212ENST00000591309 POLR2AP24928 1970 aaKnown RBP25.36■■□□□ 1.65
ERCC2-212ENST00000591309 PDS5AQ29RF7 1337 aaKnown RBP25.36■■□□□ 1.65
ERCC2-212ENST00000591309 SALL1Q9NSC2 1324 aa25.36■■□□□ 1.65
ERCC2-212ENST00000591309 GRIK5Q16478 980 aa25.35■■□□□ 1.65
ERCC2-212ENST00000591309 AACSQ86V21 672 aa25.35■■□□□ 1.65
ERCC2-212ENST00000591309 PRMT6Q96LA8 375 aaPredicted RBP25.35■■□□□ 1.65
ERCC2-212ENST00000591309 IL1RAPL2Q9NP60 686 aa25.35■■□□□ 1.65
ERCC2-212ENST00000591309 CLRN2A0PK11 232 aa25.34■■□□□ 1.65
ERCC2-212ENST00000591309 ARID4AP29374 1257 aaPredicted RBP25.34■■□□□ 1.65
ERCC2-212ENST00000591309 NF2P35240 595 aa25.34■■□□□ 1.65
ERCC2-212ENST00000591309 CST9Q5W186 159 aa25.34■■□□□ 1.65
ERCC2-212ENST00000591309 PAXIP1Q6ZW49 1069 aaPredicted RBP25.34■■□□□ 1.65
ERCC2-212ENST00000591309 C2orf69Q8N8R5 385 aa25.34■■□□□ 1.65
ERCC2-212ENST00000591309 SPATA5Q8NB90 893 aa25.34■■□□□ 1.65
ERCC2-212ENST00000591309 EAF2Q96CJ1 260 aaPredicted RBP25.34■■□□□ 1.65
ERCC2-212ENST00000591309 KLRG1Q96E93 195 aa25.34■■□□□ 1.65
ERCC2-212ENST00000591309 CDCA5Q96FF9 252 aa25.34■■□□□ 1.65
ERCC2-212ENST00000591309 MRIQ9BWK5 157 aa25.34■■□□□ 1.65
ERCC2-212ENST00000591309 MKRN1Q9UHC7 482 aaKnown RBP25.34■■□□□ 1.65
ERCC2-212ENST00000591309 PCDHAC2Q9Y5I4 1007 aa25.34■■□□□ 1.65
ERCC2-212ENST00000591309 DEFB115Q30KQ5 88 aa25.33■■□□□ 1.65
ERCC2-212ENST00000591309 DLK2Q6UY11 383 aa25.33■■□□□ 1.65
ERCC2-212ENST00000591309 TRPM7Q96QT4 1865 aa25.33■■□□□ 1.65
ERCC2-212ENST00000591309 TMOD2Q9NZR1 351 aa25.33■■□□□ 1.65
ERCC2-212ENST00000591309 HMG20BQ9P0W2 317 aa25.33■■□□□ 1.65
ERCC2-212ENST00000591309 SCAF8Q9UPN6 1271 aaKnown RBP25.33■■□□□ 1.65
ERCC2-212ENST00000591309 SUPT16HQ9Y5B9 1047 aaKnown RBP25.33■■□□□ 1.65
ERCC2-212ENST00000591309 COL1A1P02452 1464 aaPredicted RBP25.33■■□□□ 1.65
ERCC2-212ENST00000591309 IFIT2P09913 472 aaKnown RBP25.32■■□□□ 1.64
ERCC2-212ENST00000591309 PRDX5P30044 214 aa25.32■■□□□ 1.64
ERCC2-212ENST00000591309 TNFAIP1Q13829 316 aa25.32■■□□□ 1.64
ERCC2-212ENST00000591309 HHIPL2Q6UWX4 724 aa25.32■■□□□ 1.64
ERCC2-212ENST00000591309 ERICH6Q7L0X2 663 aa25.32■■□□□ 1.64
ERCC2-212ENST00000591309 DZIP1Q86YF9 867 aaKnown RBP25.32■■□□□ 1.64
ERCC2-212ENST00000591309 SLF2Q8IX21 1173 aa25.32■■□□□ 1.64
ERCC2-212ENST00000591309 GBA2Q9HCG7 927 aaPredicted RBP25.32■■□□□ 1.64
ERCC2-212ENST00000591309 DBNLQ9UJU6 430 aaKnown RBP25.32■■□□□ 1.64
ERCC2-212ENST00000591309 DNAJC5GQ8N7S2 189 aa25.31■■□□□ 1.64
ERCC2-212ENST00000591309 TDRD3Q9H7E2 651 aaKnown RBP25.31■■□□□ 1.64
ERCC2-212ENST00000591309 TNNI2P48788 182 aa25.3■■□□□ 1.64
ERCC2-212ENST00000591309 ZDHHC15Q96MV8 337 aa25.3■■□□□ 1.64
ERCC2-212ENST00000591309 LRRCC1Q9C099 1032 aa25.3■■□□□ 1.64
ERCC2-212ENST00000591309 ZNF70Q9UC06 446 aaPredicted RBP25.3■■□□□ 1.64
ERCC2-212ENST00000591309 TLL2Q9Y6L7 1015 aa25.3■■□□□ 1.64
ERCC2-212ENST00000591309 MCAMP43121 646 aa25.29■■□□□ 1.64
ERCC2-212ENST00000591309 AAMPQ13685 434 aa25.29■■□□□ 1.64
ERCC2-212ENST00000591309 SPDYE2Q495Y8 402 aa25.29■■□□□ 1.64
ERCC2-212ENST00000591309 ZNF512BQ96KM6 892 aaPredicted RBP25.29■■□□□ 1.64
ERCC2-212ENST00000591309 DEFB129Q9H1M3 183 aa25.29■■□□□ 1.64
ERCC2-212ENST00000591309 TLR7Q9NYK1 1049 aaKnown RBP25.29■■□□□ 1.64
ERCC2-212ENST00000591309 LRP2BPQ9P2M1 347 aa25.29■■□□□ 1.64
ERCC2-212ENST00000591309 PPP2R3BQ9Y5P8 575 aa25.29■■□□□ 1.64
ERCC2-212ENST00000591309 TTLL12Q14166 644 aaPredicted RBP25.28■■□□□ 1.64
ERCC2-212ENST00000591309 PRAMEF18Q5VWM3 479 aa25.28■■□□□ 1.64
ERCC2-212ENST00000591309 SNRKQ9NRH2 765 aa25.28■■□□□ 1.64
ERCC2-212ENST00000591309 RAI14Q9P0K7 980 aa25.28■■□□□ 1.64
ERCC2-212ENST00000591309 CNTNAP1P78357 1384 aa25.28■■□□□ 1.64
ERCC2-212ENST00000591309 RASSF10A6NK89 507 aa25.27■■□□□ 1.64
ERCC2-212ENST00000591309 ECE1P42892 770 aa25.27■■□□□ 1.64
ERCC2-212ENST00000591309 HUNKP57058 714 aa25.27■■□□□ 1.64
ERCC2-212ENST00000591309 DIXDC1Q155Q3 683 aa25.27■■□□□ 1.64
ERCC2-212ENST00000591309 PI16Q6UXB8 463 aa25.27■■□□□ 1.64
ERCC2-212ENST00000591309 PCDHB15Q9Y5E8 787 aa25.27■■□□□ 1.64
ERCC2-212ENST00000591309 GSTO1P78417 241 aa25.26■■□□□ 1.63
ERCC2-212ENST00000591309 SAPCD2Q86UD0 394 aa25.26■■□□□ 1.63
ERCC2-212ENST00000591309 DCTPP1Q9H773 170 aa25.26■■□□□ 1.63
ERCC2-212ENST00000591309 ZBTB47Q9UFB7 747 aaPredicted RBP25.26■■□□□ 1.63
ERCC2-212ENST00000591309 TCP10L2B9ZVM9 353 aa25.25■■□□□ 1.63
ERCC2-212ENST00000591309 LDHCP07864 332 aa25.25■■□□□ 1.63
ERCC2-212ENST00000591309 FKBP1BP68106 108 aa25.25■■□□□ 1.63
ERCC2-212ENST00000591309 GRM1Q13255 1194 aa25.25■■□□□ 1.63
ERCC2-212ENST00000591309 SUPT20HL1Q3ZLR7 823 aa25.25■■□□□ 1.63
ERCC2-212ENST00000591309 TBC1D9Q6ZT07 1266 aa25.25■■□□□ 1.63
ERCC2-212ENST00000591309 ECM29Q5VYK3 1845 aa25.24■■□□□ 1.63
ERCC2-212ENST00000591309 RASA3Q14644 834 aa25.24■■□□□ 1.63
ERCC2-212ENST00000591309 APOBEC3HQ6NTF7 200 aaKnown RBP25.24■■□□□ 1.63
ERCC2-212ENST00000591309 DAGLAQ9Y4D2 1042 aa25.24■■□□□ 1.63
ERCC2-212ENST00000591309 AOX1Q06278 1338 aa25.23■■□□□ 1.63
ERCC2-212ENST00000591309 ZAP70P43403 619 aa25.23■■□□□ 1.63
ERCC2-212ENST00000591309 HHIPL1Q96JK4 782 aa25.23■■□□□ 1.63
ERCC2-212ENST00000591309 VEGFBP49765 207 aa25.22■■□□□ 1.63
ERCC2-212ENST00000591309 MECOMQ03112 1051 aa25.22■■□□□ 1.63
ERCC2-212ENST00000591309 ARMC9Q7Z3E5 817 aa25.22■■□□□ 1.63
ERCC2-212ENST00000591309 NOL10Q9BSC4 688 aaKnown RBP25.22■■□□□ 1.63
ERCC2-212ENST00000591309 USP40Q9NVE5 1235 aa25.22■■□□□ 1.63
ERCC2-212ENST00000591309 WDR33Q9C0J8 1336 aaKnown RBP25.21■■□□□ 1.63
ERCC2-212ENST00000591309 PPP1R12BO60237 982 aaPredicted RBP25.21■■□□□ 1.63
ERCC2-212ENST00000591309 CAPNS2Q96L46 248 aa25.21■■□□□ 1.63
ERCC2-212ENST00000591309 SMARCA5O60264 1052 aaPredicted RBP25.2■■□□□ 1.62
ERCC2-212ENST00000591309 IGSF3O75054 1194 aa25.2■■□□□ 1.62
ERCC2-212ENST00000591309 CYP2E1P05181 493 aaPredicted RBP25.2■■□□□ 1.62
ERCC2-212ENST00000591309 CACNB3P54284 484 aa25.2■■□□□ 1.62
ERCC2-212ENST00000591309 PRKG1Q13976 671 aa25.2■■□□□ 1.62
ERCC2-212ENST00000591309 FKBP1CQ5VVH2 108 aa25.2■■□□□ 1.62
ERCC2-212ENST00000591309 CYP4F22Q6NT55 531 aa25.2■■□□□ 1.62
ERCC2-212ENST00000591309 EXOC6Q8TAG9 804 aa25.2■■□□□ 1.62
ERCC2-212ENST00000591309 MROH7-TTC4A0A0A0MT08 1334 aa25.19■■□□□ 1.62
ERCC2-212ENST00000591309 NAA16Q6N069 864 aaPredicted RBP25.19■■□□□ 1.62
ERCC2-212ENST00000591309 RGMBQ6NW40 437 aa25.19■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms