RNA–Protein interactions for RNA: ENST00000591097.5

CIRBP-231, Transcript of cold inducible RNA binding protein, human

TSL 1 (best)

Gene CIRBP, Length 1,507 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-231	ENST00000591097	PRMT6	Q96LA8	375 aa	Predicted RBP	28.65	■■■□□ 2.18
CIRBP-231	ENST00000591097	AKAP11	Q9UKA4	1901 aa		28.65	■■■□□ 2.18
CIRBP-231	ENST00000591097	AOX1	Q06278	1338 aa		28.65	■■■□□ 2.18
CIRBP-231	ENST00000591097	ECM29	Q5VYK3	1845 aa		28.64	■■■□□ 2.18
CIRBP-231	ENST00000591097	CCDC158	Q5M9N0	1113 aa		28.64	■■■□□ 2.18
CIRBP-231	ENST00000591097	USP48	Q86UV5	1035 aa		28.64	■■■□□ 2.18
CIRBP-231	ENST00000591097	EXOC6	Q8TAG9	804 aa		28.64	■■■□□ 2.18
CIRBP-231	ENST00000591097	MRI	Q9BWK5	157 aa		28.64	■■■□□ 2.18
CIRBP-231	ENST00000591097	PCNT	O95613	3336 aa		28.64	■■■□□ 2.18
CIRBP-231	ENST00000591097	ADM5	C9JUS6	153 aa		28.64	■■■□□ 2.17
CIRBP-231	ENST00000591097	CRK	P46108	304 aa		28.64	■■■□□ 2.17
CIRBP-231	ENST00000591097	DLK2	Q6UY11	383 aa		28.64	■■■□□ 2.17
CIRBP-231	ENST00000591097	CLASRP	Q8N2M8	674 aa	Known RBP	28.64	■■■□□ 2.17
CIRBP-231	ENST00000591097	TRPM7	Q96QT4	1865 aa		28.63	■■■□□ 2.17
CIRBP-231	ENST00000591097	HTRA3	P83110	453 aa		28.63	■■■□□ 2.17
CIRBP-231	ENST00000591097	TTC39A	Q5SRH9	613 aa		28.63	■■■□□ 2.17
CIRBP-231	ENST00000591097	SULF1	Q8IWU6	871 aa		28.63	■■■□□ 2.17
CIRBP-231	ENST00000591097	MAST3	O60307	1309 aa		28.62	■■■□□ 2.17
CIRBP-231	ENST00000591097	ZGPAT	Q8N5A5	531 aa	Known RBP	28.62	■■■□□ 2.17
CIRBP-231	ENST00000591097	LRRCC1	Q9C099	1032 aa		28.62	■■■□□ 2.17
CIRBP-231	ENST00000591097	LDHB	P07195	334 aa	Known RBP	28.61	■■■□□ 2.17
CIRBP-231	ENST00000591097	CST9	Q5W186	159 aa		28.61	■■■□□ 2.17
CIRBP-231	ENST00000591097	TEKT1	Q969V4	418 aa		28.61	■■■□□ 2.17
CIRBP-231	ENST00000591097	CREBZF	Q9NS37	354 aa		28.61	■■■□□ 2.17
CIRBP-231	ENST00000591097	RBM5	P52756	815 aa	Known RBP eCLIP	28.6	■■■□□ 2.17	2e-12	■□□□□ 8.3
CIRBP-231	ENST00000591097	ZDHHC15	Q96MV8	337 aa		28.6	■■■□□ 2.17
CIRBP-231	ENST00000591097	SCAF8	Q9UPN6	1271 aa	Known RBP	28.6	■■■□□ 2.17
CIRBP-231	ENST00000591097	TMEM88B	A6NKF7	163 aa		28.59	■■■□□ 2.17
CIRBP-231	ENST00000591097	HDAC1	Q13547	482 aa	Predicted RBP	28.59	■■■□□ 2.17
CIRBP-231	ENST00000591097	HHIPL2	Q6UWX4	724 aa		28.59	■■■□□ 2.17
CIRBP-231	ENST00000591097	ABCF2	Q9UG63	623 aa		28.59	■■■□□ 2.17
CIRBP-231	ENST00000591097	DIXDC1	Q155Q3	683 aa		28.58	■■■□□ 2.17
CIRBP-231	ENST00000591097	SPDYE2	Q495Y8	402 aa		28.58	■■■□□ 2.17
CIRBP-231	ENST00000591097	APOBEC3H	Q6NTF7	200 aa	Known RBP	28.58	■■■□□ 2.17
CIRBP-231	ENST00000591097	APOBEC3F	Q8IUX4	373 aa	Known RBP	28.58	■■■□□ 2.17
CIRBP-231	ENST00000591097	CLRN2	A0PK11	232 aa		28.57	■■■□□ 2.16
CIRBP-231	ENST00000591097	MYO1B	O43795	1136 aa		28.57	■■■□□ 2.16
CIRBP-231	ENST00000591097	SMARCA5	O60264	1052 aa	Predicted RBP	28.57	■■■□□ 2.16
CIRBP-231	ENST00000591097	TBC1D9	Q6ZT07	1266 aa		28.57	■■■□□ 2.16
CIRBP-231	ENST00000591097	SNRK	Q9NRH2	765 aa		28.57	■■■□□ 2.16
CIRBP-231	ENST00000591097	IFIT2	P09913	472 aa	Known RBP	28.56	■■■□□ 2.16
CIRBP-231	ENST00000591097	ZNF384	Q8TF68	577 aa		28.56	■■■□□ 2.16
CIRBP-231	ENST00000591097	CELF2	O95319	508 aa	Known RBP	28.55	■■■□□ 2.16
CIRBP-231	ENST00000591097	CYP2E1	P05181	493 aa	Predicted RBP	28.55	■■■□□ 2.16
CIRBP-231	ENST00000591097	SPTY2D1	Q68D10	685 aa	Predicted RBP	28.55	■■■□□ 2.16
CIRBP-231	ENST00000591097	CDCA5	Q96FF9	252 aa		28.55	■■■□□ 2.16
CIRBP-231	ENST00000591097	DAGLA	Q9Y4D2	1042 aa		28.55	■■■□□ 2.16
CIRBP-231	ENST00000591097	ZAP70	P43403	619 aa		28.54	■■■□□ 2.16
CIRBP-231	ENST00000591097	DNAJC5G	Q8N7S2	189 aa		28.54	■■■□□ 2.16
CIRBP-231	ENST00000591097	TDRD3	Q9H7E2	651 aa	Known RBP	28.54	■■■□□ 2.16
CIRBP-231	ENST00000591097	ZNF70	Q9UC06	446 aa	Predicted RBP	28.54	■■■□□ 2.16
CIRBP-231	ENST00000591097	GAK	O14976	1311 aa		28.54	■■■□□ 2.16
CIRBP-231	ENST00000591097	IRX6	P78412	446 aa	Predicted RBP	28.53	■■■□□ 2.16
CIRBP-231	ENST00000591097	MYH2	Q9UKX2	1941 aa		28.53	■■■□□ 2.16
CIRBP-231	ENST00000591097	MECOM	Q03112	1051 aa		28.53	■■■□□ 2.16
CIRBP-231	ENST00000591097	ERICH6	Q7L0X2	663 aa		28.53	■■■□□ 2.16
CIRBP-231	ENST00000591097	DZIP1	Q86YF9	867 aa	Known RBP	28.53	■■■□□ 2.16
CIRBP-231	ENST00000591097	BCL11A	Q9H165	835 aa		28.52	■■■□□ 2.16
CIRBP-231	ENST00000591097	DEFB129	Q9H1M3	183 aa		28.52	■■■□□ 2.16
CIRBP-231	ENST00000591097	ZNF408	Q9H9D4	720 aa		28.52	■■■□□ 2.16
CIRBP-231	ENST00000591097	PRAMEF18	Q5VWM3	479 aa		28.51	■■■□□ 2.15
CIRBP-231	ENST00000591097	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	28.51	■■■□□ 2.15
CIRBP-231	ENST00000591097	NSUN4	Q96CB9	384 aa	Known RBP	28.51	■■■□□ 2.15
CIRBP-231	ENST00000591097	FAM163A	Q96GL9	167 aa	Predicted RBP	28.51	■■■□□ 2.15
CIRBP-231	ENST00000591097	VEZT	Q9HBM0	779 aa		28.51	■■■□□ 2.15
CIRBP-231	ENST00000591097	NDUFB9	Q9Y6M9	179 aa		28.5	■■■□□ 2.15
CIRBP-231	ENST00000591097	MYO5A	Q9Y4I1	1855 aa	Known RBP	28.5	■■■□□ 2.15
CIRBP-231	ENST00000591097	MAST2	Q6P0Q8	1798 aa		28.5	■■■□□ 2.15
CIRBP-231	ENST00000591097	PIH1D3	Q9NQM4	214 aa	Known RBP	28.49	■■■□□ 2.15
CIRBP-231	ENST00000591097	LRP2BP	Q9P2M1	347 aa		28.49	■■■□□ 2.15
CIRBP-231	ENST00000591097	PPP2R3B	Q9Y5P8	575 aa		28.49	■■■□□ 2.15
CIRBP-231	ENST00000591097	SAPCD2	Q86UD0	394 aa		28.48	■■■□□ 2.15
CIRBP-231	ENST00000591097	GCC1	Q96CN9	775 aa		28.48	■■■□□ 2.15
CIRBP-231	ENST00000591097	TLL2	Q9Y6L7	1015 aa		28.48	■■■□□ 2.15
CIRBP-231	ENST00000591097	MROH7-TTC4	A0A0A0MT08	1334 aa		28.48	■■■□□ 2.15
CIRBP-231	ENST00000591097	RASSF10	A6NK89	507 aa		28.48	■■■□□ 2.15
CIRBP-231	ENST00000591097	ATP5J	P18859	108 aa		28.48	■■■□□ 2.15
CIRBP-231	ENST00000591097	SLF2	Q8IX21	1173 aa		28.48	■■■□□ 2.15
CIRBP-231	ENST00000591097	ANTXR1	Q9H6X2	564 aa		28.48	■■■□□ 2.15
CIRBP-231	ENST00000591097	RAI14	Q9P0K7	980 aa		28.48	■■■□□ 2.15
CIRBP-231	ENST00000591097	DOCK2	Q92608	1830 aa		28.47	■■■□□ 2.15
CIRBP-231	ENST00000591097	CACNB3	P54284	484 aa		28.47	■■■□□ 2.15
CIRBP-231	ENST00000591097	TNFAIP1	Q13829	316 aa		28.47	■■■□□ 2.15
CIRBP-231	ENST00000591097	RASA3	Q14644	834 aa		28.47	■■■□□ 2.15
CIRBP-231	ENST00000591097	FKBP1C	Q5VVH2	108 aa		28.47	■■■□□ 2.15
CIRBP-231	ENST00000591097	CDC42EP5	Q6NZY7	148 aa		28.47	■■■□□ 2.15
CIRBP-231	ENST00000591097	ABT1	Q9ULW3	272 aa	Known RBP	28.47	■■■□□ 2.15
CIRBP-231	ENST00000591097	CNTNAP1	P78357	1384 aa		28.47	■■■□□ 2.15
CIRBP-231	ENST00000591097	SSC5D	A1L4H1	1573 aa		28.46	■■■□□ 2.15
CIRBP-231	ENST00000591097	IGSF3	O75054	1194 aa		28.46	■■■□□ 2.15
CIRBP-231	ENST00000591097	IGHD	P01880	384 aa		28.46	■■■□□ 2.15
CIRBP-231	ENST00000591097	GBA2	Q9HCG7	927 aa	Predicted RBP	28.46	■■■□□ 2.15
CIRBP-231	ENST00000591097	SMC5	Q8IY18	1101 aa		28.45	■■■□□ 2.15
CIRBP-231	ENST00000591097	KLRG1	Q96E93	195 aa		28.45	■■■□□ 2.15
CIRBP-231	ENST00000591097	RWDD1	Q9H446	243 aa	Predicted RBP	28.45	■■■□□ 2.15
CIRBP-231	ENST00000591097	PAPPA2	Q9BXP8	1791 aa		28.45	■■■□□ 2.14
CIRBP-231	ENST00000591097	TCP10L2	B9ZVM9	353 aa		28.44	■■■□□ 2.14
CIRBP-231	ENST00000591097	GSTO1	P78417	241 aa		28.44	■■■□□ 2.14
CIRBP-231	ENST00000591097	RFX7	Q2KHR2	1363 aa		28.44	■■■□□ 2.14
CIRBP-231	ENST00000591097	GPR75-ASB3	A0A0A6YYF3	556 aa		28.43	■■■□□ 2.14

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