RNA–Protein interactions for RNA: ENST00000590704.5

CIRBP-229, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,456 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-229ENST00000590704 ANTXR1Q9H6X2 564 aa25.8■■□□□ 1.72
CIRBP-229ENST00000590704 BCL11AQ9H165 835 aa25.79■■□□□ 1.72
CIRBP-229ENST00000590704 ZC3H15Q8WU90 426 aaKnown RBP25.79■■□□□ 1.72
CIRBP-229ENST00000590704 PPIL4Q8WUA2 492 aaKnown RBP eCLIP25.79■■□□□ 1.72
CIRBP-229ENST00000590704 PIH1D3Q9NQM4 214 aaKnown RBP25.79■■□□□ 1.72
CIRBP-229ENST00000590704 ATP5JP18859 108 aa25.78■■□□□ 1.72
CIRBP-229ENST00000590704 HDLBPQ00341 1268 aaKnown RBP25.78■■□□□ 1.72
CIRBP-229ENST00000590704 NUCB1Q02818 461 aa25.78■■□□□ 1.72
CIRBP-229ENST00000590704 CFAP100Q494V2 611 aa25.78■■□□□ 1.72
CIRBP-229ENST00000590704 MAP1SQ66K74 1059 aaPredicted RBP25.78■■□□□ 1.72
CIRBP-229ENST00000590704 CHADLQ6NUI6 762 aa25.78■■□□□ 1.72
CIRBP-229ENST00000590704 DLK2Q6UY11 383 aa25.78■■□□□ 1.72
CIRBP-229ENST00000590704 OGFOD1Q8N543 542 aa25.78■■□□□ 1.72
CIRBP-229ENST00000590704 SERPINA10Q9UK55 444 aa25.78■■□□□ 1.72
CIRBP-229ENST00000590704 CRKP46108 304 aa25.77■■□□□ 1.72
CIRBP-229ENST00000590704 FMR1Q06787 632 aaKnown RBP eCLIP25.77■■□□□ 1.72
CIRBP-229ENST00000590704 TSHZ3Q63HK5 1081 aa25.77■■□□□ 1.72
CIRBP-229ENST00000590704 SPDYE2BA6NHP3 402 aa25.76■■□□□ 1.71
CIRBP-229ENST00000590704 SPDYE6P0CI01 402 aa25.76■■□□□ 1.71
CIRBP-229ENST00000590704 DIXDC1Q155Q3 683 aa25.76■■□□□ 1.71
CIRBP-229ENST00000590704 B4GALNT3Q6L9W6 998 aa25.76■■□□□ 1.71
CIRBP-229ENST00000590704 APOBEC3HQ6NTF7 200 aaKnown RBP25.76■■□□□ 1.71
CIRBP-229ENST00000590704 EDC3Q96F86 508 aaKnown RBP25.76■■□□□ 1.71
CIRBP-229ENST00000590704 PI4K2BQ8TCG2 481 aa25.75■■□□□ 1.71
CIRBP-229ENST00000590704 BOLA2Q9H3K6 86 aa25.75■■□□□ 1.71
CIRBP-229ENST00000590704 ABCF2Q9UG63 623 aa25.75■■□□□ 1.71
CIRBP-229ENST00000590704 HDAC9Q9UKV0 1011 aa25.75■■□□□ 1.71
CIRBP-229ENST00000590704 LDHBP07195 334 aaKnown RBP25.74■■□□□ 1.71
CIRBP-229ENST00000590704 HHIPL2Q6UWX4 724 aa25.74■■□□□ 1.71
CIRBP-229ENST00000590704 CNTROBQ8N137 903 aa25.74■■□□□ 1.71
CIRBP-229ENST00000590704 NSUN4Q96CB9 384 aaKnown RBP25.74■■□□□ 1.71
CIRBP-229ENST00000590704 MECOMQ03112 1051 aa25.73■■□□□ 1.71
CIRBP-229ENST00000590704 SMC1BQ8NDV3 1235 aa25.73■■□□□ 1.71
CIRBP-229ENST00000590704 FAM163AQ96GL9 167 aaPredicted RBP25.73■■□□□ 1.71
CIRBP-229ENST00000590704 ZDHHC15Q96MV8 337 aa25.73■■□□□ 1.71
CIRBP-229ENST00000590704 LNPKQ9C0E8 428 aa25.73■■□□□ 1.71
CIRBP-229ENST00000590704 SCAF8Q9UPN6 1271 aaKnown RBP25.73■■□□□ 1.71
CIRBP-229ENST00000590704 CLEC11AQ9Y240 323 aa25.73■■□□□ 1.71
CIRBP-229ENST00000590704 PASKQ96RG2 1323 aa25.73■■□□□ 1.71
CIRBP-229ENST00000590704 FSTL1Q12841 308 aa25.72■■□□□ 1.71
CIRBP-229ENST00000590704 DLGAP5Q15398 846 aa25.72■■□□□ 1.71
CIRBP-229ENST00000590704 CHD1LQ86WJ1 897 aa25.72■■□□□ 1.71
CIRBP-229ENST00000590704 HAUS7Q99871 368 aa25.72■■□□□ 1.71
CIRBP-229ENST00000590704 ECHDC1Q9NTX5 307 aa25.72■■□□□ 1.71
CIRBP-229ENST00000590704 STAP2Q9UGK3 403 aa25.72■■□□□ 1.71
CIRBP-229ENST00000590704 DAGLAQ9Y4D2 1042 aa25.72■■□□□ 1.71
CIRBP-229ENST00000590704 GAKO14976 1311 aa25.72■■□□□ 1.71
CIRBP-229ENST00000590704 ANGEL2Q5VTE6 544 aaKnown RBP25.72■■□□□ 1.71
CIRBP-229ENST00000590704 ZGPATQ8N5A5 531 aaKnown RBP25.72■■□□□ 1.71
CIRBP-229ENST00000590704 GLIS2Q9BZE0 524 aaPredicted RBP25.72■■□□□ 1.71
CIRBP-229ENST00000590704 GGA3Q9NZ52 723 aa25.72■■□□□ 1.71
CIRBP-229ENST00000590704 MYH2Q9UKX2 1941 aa25.71■■□□□ 1.71
CIRBP-229ENST00000590704 PDE4AP27815 886 aa25.71■■□□□ 1.71
CIRBP-229ENST00000590704 ERICH6Q7L0X2 663 aa25.71■■□□□ 1.71
CIRBP-229ENST00000590704 DOCK2Q92608 1830 aa25.7■■□□□ 1.71
CIRBP-229ENST00000590704 TEKT1Q969V4 418 aa25.7■■□□□ 1.7
CIRBP-229ENST00000590704 TDRD3Q9H7E2 651 aaKnown RBP25.7■■□□□ 1.7
CIRBP-229ENST00000590704 TRAF5O00463 557 aa25.69■■□□□ 1.7
CIRBP-229ENST00000590704 ADGRA1Q86SQ6 560 aa25.69■■□□□ 1.7
CIRBP-229ENST00000590704 ECM29Q5VYK3 1845 aa25.68■■□□□ 1.7
CIRBP-229ENST00000590704 PDE1AP54750 535 aa25.68■■□□□ 1.7
CIRBP-229ENST00000590704 SPTY2D1Q68D10 685 aaPredicted RBP25.68■■□□□ 1.7
CIRBP-229ENST00000590704 PLEKHM2Q8IWE5 1019 aa25.68■■□□□ 1.7
CIRBP-229ENST00000590704 MAST3O60307 1309 aa25.68■■□□□ 1.7
CIRBP-229ENST00000590704 TTC41PQ6P2S7 1318 aa25.68■■□□□ 1.7
CIRBP-229ENST00000590704 PITPNM2Q9BZ72 1349 aa25.68■■□□□ 1.7
CIRBP-229ENST00000590704 CLRN2A0PK11 232 aa25.67■■□□□ 1.7
CIRBP-229ENST00000590704 ADM5C9JUS6 153 aa25.67■■□□□ 1.7
CIRBP-229ENST00000590704 CHGBP05060 677 aa25.67■■□□□ 1.7
CIRBP-229ENST00000590704 MX1P20591 662 aa25.67■■□□□ 1.7
CIRBP-229ENST00000590704 SPDYE2Q495Y8 402 aa25.67■■□□□ 1.7
CIRBP-229ENST00000590704 USP48Q86UV5 1035 aa25.67■■□□□ 1.7
CIRBP-229ENST00000590704 ZNF70Q9UC06 446 aaPredicted RBP25.67■■□□□ 1.7
CIRBP-229ENST00000590704 GOLIM4O00461 696 aa25.66■■□□□ 1.7
CIRBP-229ENST00000590704 RBM5P52756 815 aaKnown RBP eCLIP25.66■■□□□ 1.72e-12■□□□□ 8.3
CIRBP-229ENST00000590704 CDC37L1Q7L3B6 337 aa25.66■■□□□ 1.7
CIRBP-229ENST00000590704 DNAJC2Q99543 621 aaKnown RBP25.66■■□□□ 1.7
CIRBP-229ENST00000590704 LRP2BPQ9P2M1 347 aa25.66■■□□□ 1.7
CIRBP-229ENST00000590704 GPR75-ASB3A0A0A6YYF3 556 aa25.66■■□□□ 1.7
CIRBP-229ENST00000590704 SLFNL1Q499Z3 407 aa25.66■■□□□ 1.7
CIRBP-229ENST00000590704 CST9Q5W186 159 aa25.66■■□□□ 1.7
CIRBP-229ENST00000590704 CDC42EP5Q6NZY7 148 aa25.66■■□□□ 1.7
CIRBP-229ENST00000590704 PAG1Q9NWQ8 432 aa25.66■■□□□ 1.7
CIRBP-229ENST00000590704 RAI14Q9P0K7 980 aa25.66■■□□□ 1.7
CIRBP-229ENST00000590704 RHBDL3P58872 404 aa25.65■■□□□ 1.7
CIRBP-229ENST00000590704 KRT26Q7Z3Y9 468 aa25.65■■□□□ 1.7
CIRBP-229ENST00000590704 MROH7-TTC4A0A0A0MT08 1334 aa25.64■■□□□ 1.7
CIRBP-229ENST00000590704 TCRBV5S4A2TA0A5A2 114 aa25.64■■□□□ 1.69
CIRBP-229ENST00000590704 DZIP1Q86YF9 867 aaKnown RBP25.64■■□□□ 1.69
CIRBP-229ENST00000590704 DCPSQ96C86 337 aaKnown RBP25.64■■□□□ 1.69
CIRBP-229ENST00000590704 OSBPL3Q9H4L5 887 aa25.64■■□□□ 1.69
CIRBP-229ENST00000590704 IGSF3O75054 1194 aa25.63■■□□□ 1.69
CIRBP-229ENST00000590704 CACNB3P54284 484 aa25.63■■□□□ 1.69
CIRBP-229ENST00000590704 PRAMEF18Q5VWM3 479 aa25.63■■□□□ 1.69
CIRBP-229ENST00000590704 CNTNAP1P78357 1384 aa25.63■■□□□ 1.69
CIRBP-229ENST00000590704 IDH1O75874 414 aaKnown RBP25.61■■□□□ 1.69
CIRBP-229ENST00000590704 CDAN1Q8IWY9 1227 aa25.61■■□□□ 1.69
CIRBP-229ENST00000590704 RFX7Q2KHR2 1363 aa25.61■■□□□ 1.69
CIRBP-229ENST00000590704 GLRX3O76003 335 aaKnown RBP25.6■■□□□ 1.69
CIRBP-229ENST00000590704 MAP4K4O95819 1239 aaPredicted RBP25.6■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms