RNA–Protein interactions for RNA: ENST00000590180.1

TPM4-212, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-212ENST00000590180 POLA2Q14181 598 aa14.93□□□□□ -0.02
TPM4-212ENST00000590180 SSH3Q8TE77 659 aa14.93□□□□□ -0.02
TPM4-212ENST00000590180 TEKT1Q969V4 418 aa14.93□□□□□ -0.02
TPM4-212ENST00000590180 CCDC102AQ96A19 550 aa14.93□□□□□ -0.02
TPM4-212ENST00000590180 ZNF70Q9UC06 446 aaPredicted RBP14.93□□□□□ -0.02
TPM4-212ENST00000590180 DENND2AQ9ULE3 1009 aa14.93□□□□□ -0.02
TPM4-212ENST00000590180 COG6Q9Y2V7 657 aa14.93□□□□□ -0.02
TPM4-212ENST00000590180 FOXN1O15353 648 aa14.92□□□□□ -0.02
TPM4-212ENST00000590180 HDLBPQ00341 1268 aaKnown RBP14.92□□□□□ -0.02
TPM4-212ENST00000590180 ARMC9Q7Z3E5 817 aa14.92□□□□□ -0.02
TPM4-212ENST00000590180 YTHDC1Q96MU7 727 aaKnown RBP14.92□□□□□ -0.02
TPM4-212ENST00000590180 MRIQ9BWK5 157 aa14.92□□□□□ -0.02
TPM4-212ENST00000590180 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.92□□□□□ -0.02
TPM4-212ENST00000590180 SUGT1Q9Y2Z0 365 aa14.92□□□□□ -0.02
TPM4-212ENST00000590180 AOX1Q06278 1338 aa14.92□□□□□ -0.02
TPM4-212ENST00000590180 SEMA3EO15041 775 aa14.91□□□□□ -0.02
TPM4-212ENST00000590180 NOGQ13253 232 aa14.91□□□□□ -0.02
TPM4-212ENST00000590180 RASA3Q14644 834 aa14.91□□□□□ -0.02
TPM4-212ENST00000590180 MVPQ14764 893 aaKnown RBP14.91□□□□□ -0.02
TPM4-212ENST00000590180 SUPT20HL1Q3ZLR7 823 aa14.91□□□□□ -0.02
TPM4-212ENST00000590180 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.91□□□□□ -0.02
TPM4-212ENST00000590180 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.91□□□□□ -0.02
TPM4-212ENST00000590180 MAST3O60307 1309 aa14.91□□□□□ -0.02
TPM4-212ENST00000590180 TCP10L2B9ZVM9 353 aa14.9□□□□□ -0.02
TPM4-212ENST00000590180 LDHBP07195 334 aaKnown RBP14.9□□□□□ -0.02
TPM4-212ENST00000590180 CTCFP49711 727 aaPredicted RBP14.9□□□□□ -0.02
TPM4-212ENST00000590180 TNFAIP1Q13829 316 aa14.9□□□□□ -0.02
TPM4-212ENST00000590180 SPDYE2Q495Y8 402 aa14.9□□□□□ -0.02
TPM4-212ENST00000590180 ZIC5Q96T25 663 aa14.9□□□□□ -0.02
TPM4-212ENST00000590180 DDX19BQ9UMR2 479 aa14.9□□□□□ -0.02
TPM4-212ENST00000590180 ANGEL1Q9UNK9 670 aaKnown RBP14.9□□□□□ -0.02
TPM4-212ENST00000590180 PPP2R3BQ9Y5P8 575 aa14.9□□□□□ -0.02
TPM4-212ENST00000590180 ZNF646O15015 1829 aaPredicted RBP14.89□□□□□ -0.03
TPM4-212ENST00000590180 TNNI2P48788 182 aa14.89□□□□□ -0.03
TPM4-212ENST00000590180 KIF23Q02241 960 aaPredicted RBP14.89□□□□□ -0.03
TPM4-212ENST00000590180 NBPF12Q5TAG4 269 aaPredicted RBP14.89□□□□□ -0.03
TPM4-212ENST00000590180 COL13A1Q5TAT6 717 aaPredicted RBP14.89□□□□□ -0.03
TPM4-212ENST00000590180 CEP85Q6P2H3 762 aa14.89□□□□□ -0.03
TPM4-212ENST00000590180 HHIPL2Q6UWX4 724 aa14.89□□□□□ -0.03
TPM4-212ENST00000590180 ZDHHC15Q96MV8 337 aa14.89□□□□□ -0.03
TPM4-212ENST00000590180 CHMP4BQ9H444 224 aaKnown RBP14.89□□□□□ -0.03
TPM4-212ENST00000590180 TMOD2Q9NZR1 351 aa14.89□□□□□ -0.03
TPM4-212ENST00000590180 ABCF2Q9UG63 623 aa14.89□□□□□ -0.03
TPM4-212ENST00000590180 FAM155AB1AL88 458 aaPredicted RBP14.88□□□□□ -0.03
TPM4-212ENST00000590180 PPP1R12BO60237 982 aaPredicted RBP14.88□□□□□ -0.03
TPM4-212ENST00000590180 LBX1P52954 281 aa14.88□□□□□ -0.03
TPM4-212ENST00000590180 CACNB3P54284 484 aa14.88□□□□□ -0.03
TPM4-212ENST00000590180 RASGRF1Q13972 1273 aa14.88□□□□□ -0.03
TPM4-212ENST00000590180 ZGPATQ8N5A5 531 aaKnown RBP14.88□□□□□ -0.03
TPM4-212ENST00000590180 FZD1Q9UP38 647 aa14.88□□□□□ -0.03
TPM4-212ENST00000590180 NOP58Q9Y2X3 529 aaKnown RBP14.88□□□□□ -0.03
TPM4-212ENST00000590180 SLC10A3P09131 477 aa14.87□□□□□ -0.03
TPM4-212ENST00000590180 PRDX5P30044 214 aa14.87□□□□□ -0.03
TPM4-212ENST00000590180 PDE3AQ14432 1141 aa14.87□□□□□ -0.03
TPM4-212ENST00000590180 DIXDC1Q155Q3 683 aa14.87□□□□□ -0.03
TPM4-212ENST00000590180 TNNI3KQ59H18 835 aa14.87□□□□□ -0.03
TPM4-212ENST00000590180 SPTY2D1Q68D10 685 aaPredicted RBP14.87□□□□□ -0.03
TPM4-212ENST00000590180 APOBEC3HQ6NTF7 200 aaKnown RBP14.87□□□□□ -0.03
TPM4-212ENST00000590180 GPR108Q9NPR9 543 aa14.87□□□□□ -0.03
TPM4-212ENST00000590180 FPGT-TNNI3KV9GXZ4 949 aa14.87□□□□□ -0.03
TPM4-212ENST00000590180 UQCRFS1P1P0C7P4 283 aa14.86□□□□□ -0.03
TPM4-212ENST00000590180 CCDC158Q5M9N0 1113 aa14.86□□□□□ -0.03
TPM4-212ENST00000590180 TTC39AQ5SRH9 613 aa14.86□□□□□ -0.03
TPM4-212ENST00000590180 C20orf194Q5TEA3 1177 aa14.86□□□□□ -0.03
TPM4-212ENST00000590180 ERICH6Q7L0X2 663 aa14.86□□□□□ -0.03
TPM4-212ENST00000590180 RASAL3Q86YV0 1011 aa14.86□□□□□ -0.03
TPM4-212ENST00000590180 RPAP2Q8IXW5 612 aaPredicted RBP14.86□□□□□ -0.03
TPM4-212ENST00000590180 SLC10A4Q96EP9 437 aa14.86□□□□□ -0.03
TPM4-212ENST00000590180 DBNDD2Q9BQY9 259 aa14.86□□□□□ -0.03
TPM4-212ENST00000590180 TMEM39BQ9GZU3 492 aa14.86□□□□□ -0.03
TPM4-212ENST00000590180 ZBTB40Q9NUA8 1239 aa14.86□□□□□ -0.03
TPM4-212ENST00000590180 HMG20BQ9P0W2 317 aa14.86□□□□□ -0.03
TPM4-212ENST00000590180 EXOC6BQ9Y2D4 811 aa14.86□□□□□ -0.03
TPM4-212ENST00000590180 PCNTO95613 3336 aa14.86□□□□□ -0.03
TPM4-212ENST00000590180 SALL1Q9NSC2 1324 aa14.86□□□□□ -0.03
TPM4-212ENST00000590180 HMMRO75330 724 aa14.85□□□□□ -0.03
TPM4-212ENST00000590180 HSPA8P11142 646 aaKnown RBP14.85□□□□□ -0.03
TPM4-212ENST00000590180 MKRN3Q13064 507 aaKnown RBP14.85□□□□□ -0.03
TPM4-212ENST00000590180 DZIP1Q86YF9 867 aaKnown RBP14.85□□□□□ -0.03
TPM4-212ENST00000590180 SPATA5Q8NB90 893 aa14.85□□□□□ -0.03
TPM4-212ENST00000590180 CCDC8Q9H0W5 538 aaPredicted RBP14.85□□□□□ -0.03
TPM4-212ENST00000590180 BCL11AQ9H165 835 aa14.85□□□□□ -0.03
TPM4-212ENST00000590180 USP40Q9NVE5 1235 aa14.85□□□□□ -0.03
TPM4-212ENST00000590180 TSKSQ9UJT2 592 aa14.85□□□□□ -0.03
TPM4-212ENST00000590180 DAGLAQ9Y4D2 1042 aa14.85□□□□□ -0.03
TPM4-212ENST00000590180 COL1A1P02452 1464 aaPredicted RBP14.84□□□□□ -0.03
TPM4-212ENST00000590180 APBB1O00213 710 aa14.84□□□□□ -0.03
TPM4-212ENST00000590180 ZBTB22O15209 634 aa14.84□□□□□ -0.03
TPM4-212ENST00000590180 CA12O43570 354 aa14.84□□□□□ -0.03
TPM4-212ENST00000590180 USP2O75604 605 aaPredicted RBP14.84□□□□□ -0.03
TPM4-212ENST00000590180 IREB2P48200 963 aaKnown RBP14.84□□□□□ -0.03
TPM4-212ENST00000590180 HSP90AB4PQ58FF6 505 aa14.84□□□□□ -0.03
TPM4-212ENST00000590180 LDLRAD1Q5T700 205 aa14.84□□□□□ -0.03
TPM4-212ENST00000590180 CDC42EP5Q6NZY7 148 aa14.84□□□□□ -0.03
TPM4-212ENST00000590180 TBC1D9Q6ZT07 1266 aa14.84□□□□□ -0.03
TPM4-212ENST00000590180 ERC1Q8IUD2 1116 aa14.84□□□□□ -0.03
TPM4-212ENST00000590180 SLF2Q8IX21 1173 aa14.84□□□□□ -0.03
TPM4-212ENST00000590180 CSRNP1Q96S65 589 aa14.84□□□□□ -0.03
TPM4-212ENST00000590180 PRDM10Q9NQV6 1147 aa14.84□□□□□ -0.03
TPM4-212ENST00000590180 SNRKQ9NRH2 765 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms