RNA–Protein interactions for RNA: ENST00000589882.1

TREM1-206, Transcript of triggering receptor expressed on myeloid cells 1, human

Gene TREM1, Length 1,876 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TREM1-206	ENST00000589882	CLSTN1	O94985	981 aa		13.45	□□□□□ -0.26
TREM1-206	ENST00000589882	RWDD2B	P57060	319 aa		13.45	□□□□□ -0.26
TREM1-206	ENST00000589882	STIM1	Q13586	685 aa		13.45	□□□□□ -0.26
TREM1-206	ENST00000589882	NCAPH	Q15003	741 aa		13.45	□□□□□ -0.26
TREM1-206	ENST00000589882	NECTIN1	Q15223	517 aa		13.45	□□□□□ -0.26
TREM1-206	ENST00000589882	CFAP100	Q494V2	611 aa		13.45	□□□□□ -0.26
TREM1-206	ENST00000589882	CEP85L	Q5SZL2	805 aa		13.45	□□□□□ -0.26
TREM1-206	ENST00000589882	TTC19	Q6DKK2	380 aa	Predicted RBP	13.45	□□□□□ -0.26
TREM1-206	ENST00000589882	RCSD1	Q6JBY9	416 aa		13.45	□□□□□ -0.26
TREM1-206	ENST00000589882	KIAA1328	Q86T90	577 aa		13.45	□□□□□ -0.26
TREM1-206	ENST00000589882	FMR1NB	Q8N0W7	255 aa	Predicted RBP	13.45	□□□□□ -0.26
TREM1-206	ENST00000589882	BCAS4	Q8TDM0	211 aa		13.45	□□□□□ -0.26
TREM1-206	ENST00000589882	BRF1	Q92994	677 aa		13.45	□□□□□ -0.26
TREM1-206	ENST00000589882	ZSWIM4	Q9H7M6	989 aa		13.45	□□□□□ -0.26
TREM1-206	ENST00000589882	HPCAL4	Q9UM19	191 aa		13.45	□□□□□ -0.26
TREM1-206	ENST00000589882	MROH2A	A6NES4	1674 aa		13.45	□□□□□ -0.26
TREM1-206	ENST00000589882	CTAGE9	A4FU28	777 aa		13.44	□□□□□ -0.26
TREM1-206	ENST00000589882	GOLGA6C	A6NDK9	693 aa		13.44	□□□□□ -0.26
TREM1-206	ENST00000589882	IPO7	O95373	1038 aa	Known RBP	13.44	□□□□□ -0.26
TREM1-206	ENST00000589882	GOLGA6D	P0CG33	693 aa		13.44	□□□□□ -0.26
TREM1-206	ENST00000589882	ME1	P48163	572 aa		13.44	□□□□□ -0.26
TREM1-206	ENST00000589882	TBC1D8B	Q0IIM8	1120 aa		13.44	□□□□□ -0.26
TREM1-206	ENST00000589882	TRAF1	Q13077	416 aa		13.44	□□□□□ -0.26
TREM1-206	ENST00000589882	DRP2	Q13474	957 aa		13.44	□□□□□ -0.26
TREM1-206	ENST00000589882	RBBP5	Q15291	538 aa	Known RBP	13.44	□□□□□ -0.26
TREM1-206	ENST00000589882	WWC2	Q6AWC2	1192 aa		13.44	□□□□□ -0.26
TREM1-206	ENST00000589882	CCDC148	Q8NFR7	591 aa		13.44	□□□□□ -0.26
TREM1-206	ENST00000589882	CRACR2A	Q9BSW2	395 aa		13.44	□□□□□ -0.26
TREM1-206	ENST00000589882	CAPS2	Q9BXY5	557 aa		13.44	□□□□□ -0.26
TREM1-206	ENST00000589882	KAT14	Q9H8E8	782 aa		13.44	□□□□□ -0.26
TREM1-206	ENST00000589882	BATF3	Q9NR55	127 aa		13.44	□□□□□ -0.26
TREM1-206	ENST00000589882	KLC4	Q9NSK0	619 aa		13.44	□□□□□ -0.26
TREM1-206	ENST00000589882	GOLGA6A	Q9NYA3	693 aa		13.44	□□□□□ -0.26
TREM1-206	ENST00000589882	USP42	Q9H9J4	1324 aa	Known RBP	13.44	□□□□□ -0.26
TREM1-206	ENST00000589882	KIF20B	Q96Q89	1820 aa		13.44	□□□□□ -0.26
TREM1-206	ENST00000589882	MAP3K5	Q99683	1374 aa		13.44	□□□□□ -0.26
TREM1-206	ENST00000589882	HIP1	O00291	1037 aa		13.44	□□□□□ -0.26
TREM1-206	ENST00000589882	PES1	O00541	588 aa	Known RBP	13.44	□□□□□ -0.26
TREM1-206	ENST00000589882	MEFV	O15553	781 aa	Predicted RBP	13.44	□□□□□ -0.26
TREM1-206	ENST00000589882	MAP4K4	O95819	1239 aa	Predicted RBP	13.44	□□□□□ -0.26
TREM1-206	ENST00000589882	SLC3A2	P08195	630 aa	Known RBP	13.44	□□□□□ -0.26
TREM1-206	ENST00000589882	RHOXF2B	P0C7M4	288 aa		13.44	□□□□□ -0.26
TREM1-206	ENST00000589882	RPS6KB1	P23443	525 aa		13.44	□□□□□ -0.26
TREM1-206	ENST00000589882	MYL5	Q02045	173 aa		13.44	□□□□□ -0.26
TREM1-206	ENST00000589882	CREB3L3	Q68CJ9	461 aa		13.44	□□□□□ -0.26
TREM1-206	ENST00000589882	RHOXF2	Q9BQY4	288 aa		13.44	□□□□□ -0.26
TREM1-206	ENST00000589882	PAGR1	Q9BTK6	254 aa		13.44	□□□□□ -0.26
TREM1-206	ENST00000589882	SUGCT	Q9HAC7	445 aa		13.44	□□□□□ -0.26
TREM1-206	ENST00000589882	ATP6V0A4	Q9HBG4	840 aa		13.44	□□□□□ -0.26
TREM1-206	ENST00000589882	CD248	Q9HCU0	757 aa		13.44	□□□□□ -0.26
TREM1-206	ENST00000589882	GLRX3	O76003	335 aa	Known RBP	13.43	□□□□□ -0.26
TREM1-206	ENST00000589882	NEFH	P12036	1026 aa		13.43	□□□□□ -0.26
TREM1-206	ENST00000589882	LMOD1	P29536	600 aa	Predicted RBP	13.43	□□□□□ -0.26
TREM1-206	ENST00000589882	ADD1	P35611	737 aa	Known RBP	13.43	□□□□□ -0.26
TREM1-206	ENST00000589882	TBX2	Q13207	712 aa	Predicted RBP	13.43	□□□□□ -0.26
TREM1-206	ENST00000589882	DCTN1	Q14203	1278 aa		13.43	□□□□□ -0.26
TREM1-206	ENST00000589882	SLC4A10	Q6U841	1118 aa		13.43	□□□□□ -0.26
TREM1-206	ENST00000589882	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	13.43	□□□□□ -0.26
TREM1-206	ENST00000589882	ZNF483	Q8TF39	744 aa	Predicted RBP	13.43	□□□□□ -0.26
TREM1-206	ENST00000589882	TATDN2	Q93075	761 aa		13.43	□□□□□ -0.26
TREM1-206	ENST00000589882	LLPH	Q9BRT6	129 aa	Known RBP	13.43	□□□□□ -0.26
TREM1-206	ENST00000589882	TEX13A	Q9BXU3	409 aa	Predicted RBP	13.43	□□□□□ -0.26
TREM1-206	ENST00000589882	NUCKS1	Q9H1E3	243 aa	Known RBP	13.43	□□□□□ -0.26
TREM1-206	ENST00000589882	ARHGEF28	Q8N1W1	1705 aa	Known RBP	13.43	□□□□□ -0.26
TREM1-206	ENST00000589882	ABCC6	O95255	1503 aa		13.43	□□□□□ -0.26
TREM1-206	ENST00000589882	GOLGA6L7	A0A1B0GV03	622 aa		13.42	□□□□□ -0.26
TREM1-206	ENST00000589882	GOLGA8K	D6RF30	607 aa		13.42	□□□□□ -0.26
TREM1-206	ENST00000589882	HMOX1	P09601	288 aa		13.42	□□□□□ -0.26
TREM1-206	ENST00000589882	SLC8A1	P32418	973 aa		13.42	□□□□□ -0.26
TREM1-206	ENST00000589882	INHBE	P58166	350 aa		13.42	□□□□□ -0.26
TREM1-206	ENST00000589882	PTH1R	Q03431	593 aa		13.42	□□□□□ -0.26
TREM1-206	ENST00000589882	SNCB	Q16143	134 aa		13.42	□□□□□ -0.26
TREM1-206	ENST00000589882	TOGARAM2	Q6ZUX3	1019 aa		13.42	□□□□□ -0.26
TREM1-206	ENST00000589882	ARHGEF25	Q86VW2	580 aa		13.42	□□□□□ -0.26
TREM1-206	ENST00000589882	COG1	Q8WTW3	980 aa		13.42	□□□□□ -0.26
TREM1-206	ENST00000589882	FBXW7	Q969H0	707 aa		13.42	□□□□□ -0.26
TREM1-206	ENST00000589882	FMNL2	Q96PY5	1086 aa		13.42	□□□□□ -0.26
TREM1-206	ENST00000589882	GGA2	Q9UJY4	613 aa		13.42	□□□□□ -0.26
TREM1-206	ENST00000589882	ITSN1	Q15811	1721 aa		13.42	□□□□□ -0.26
TREM1-206	ENST00000589882	PNMA6E	A0A0J9YXQ4	647 aa		13.42	□□□□□ -0.26
TREM1-206	ENST00000589882	MYO1F	O00160	1098 aa		13.42	□□□□□ -0.26
TREM1-206	ENST00000589882	CHL1	O00533	1208 aa		13.42	□□□□□ -0.26
TREM1-206	ENST00000589882	PFKFB2	O60825	505 aa		13.42	□□□□□ -0.26
TREM1-206	ENST00000589882	SLC4A2	P04920	1241 aa		13.42	□□□□□ -0.26
TREM1-206	ENST00000589882	ADAL	Q6DHV7	355 aa		13.42	□□□□□ -0.26
TREM1-206	ENST00000589882	PAIP2	Q9BPZ3	127 aa	Known RBP	13.42	□□□□□ -0.26
TREM1-206	ENST00000589882	NAA15	Q9BXJ9	866 aa	Known RBP	13.42	□□□□□ -0.26
TREM1-206	ENST00000589882	VCPKMT	Q9H867	229 aa		13.42	□□□□□ -0.26
TREM1-206	ENST00000589882	CABP2	Q9NPB3	220 aa		13.42	□□□□□ -0.26
TREM1-206	ENST00000589882	HOMER3	Q9NSC5	361 aa		13.42	□□□□□ -0.26
TREM1-206	ENST00000589882	HMG20B	Q9P0W2	317 aa		13.42	□□□□□ -0.26
TREM1-206	ENST00000589882	CPSF2	Q9P2I0	782 aa	Known RBP	13.42	□□□□□ -0.26
TREM1-206	ENST00000589882	MYO6	Q9UM54	1294 aa		13.42	□□□□□ -0.26
TREM1-206	ENST00000589882	RBM8A	Q9Y5S9	174 aa	Known RBP	13.42	□□□□□ -0.26
TREM1-206	ENST00000589882	MYH15	Q9Y2K3	1946 aa		13.41	□□□□□ -0.26
TREM1-206	ENST00000589882		A0A087WWV3	80 aa		13.41	□□□□□ -0.26
TREM1-206	ENST00000589882	TARSL2	A2RTX5	802 aa	Known RBP	13.41	□□□□□ -0.26
TREM1-206	ENST00000589882	ZEB2	O60315	1214 aa		13.41	□□□□□ -0.26
TREM1-206	ENST00000589882	GNGT1	P63211	74 aa		13.41	□□□□□ -0.26
TREM1-206	ENST00000589882	KARS	Q15046	597 aa	Known RBP	13.41	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms