RNA–Protein interactions for RNA: ENST00000589669.1

CCDC130-211, Transcript of coiled-coil domain containing 130, humanhuman

TSL 2

Gene CCDC130, Length 701 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-211ENST00000589669 KCNQ5Q9NR82 932 aa16.66■□□□□ 0.26
CCDC130-211ENST00000589669 BHMG1C9JSJ3 638 aaPredicted RBP16.65■□□□□ 0.26
CCDC130-211ENST00000589669 GRM8O00222 908 aa16.65■□□□□ 0.26
CCDC130-211ENST00000589669 PSMD14O00487 310 aa16.65■□□□□ 0.26
CCDC130-211ENST00000589669 VIL1P09327 827 aaKnown RBP16.65■□□□□ 0.26
CCDC130-211ENST00000589669 RPS12P25398 132 aaKnown RBP16.65■□□□□ 0.26
CCDC130-211ENST00000589669 DNAJB2P25686 324 aa16.65■□□□□ 0.26
CCDC130-211ENST00000589669 SSH1Q8WYL5 1049 aa16.65■□□□□ 0.26
CCDC130-211ENST00000589669 GPR101Q96P66 508 aaPredicted RBP16.65■□□□□ 0.26
CCDC130-211ENST00000589669 SRCIN1Q9C0H9 1055 aa16.65■□□□□ 0.26
CCDC130-211ENST00000589669 TMEM88BA6NKF7 163 aa16.64■□□□□ 0.25
CCDC130-211ENST00000589669 H7C1D1 291 aa16.64■□□□□ 0.25
CCDC130-211ENST00000589669 CT47B1P0C2W7 299 aaPredicted RBP16.64■□□□□ 0.25
CCDC130-211ENST00000589669 ALDH1L2Q3SY69 923 aa16.64■□□□□ 0.25
CCDC130-211ENST00000589669 SLC4A10Q6U841 1118 aa16.64■□□□□ 0.25
CCDC130-211ENST00000589669 MPHOSPH8Q99549 860 aa16.64■□□□□ 0.25
CCDC130-211ENST00000589669 ANKRD2Q9GZV1 360 aa16.64■□□□□ 0.25
CCDC130-211ENST00000589669 C9orf78Q9NZ63 289 aaPredicted RBP16.64■□□□□ 0.25
CCDC130-211ENST00000589669 LEMD3Q9Y2U8 911 aa16.64■□□□□ 0.25
CCDC130-211ENST00000589669 PTPRCP08575 1304 aa16.64■□□□□ 0.25
CCDC130-211ENST00000589669 ANKRD18BA2A2Z9 1011 aa16.63■□□□□ 0.25
CCDC130-211ENST00000589669 WTIPA6NIX2 430 aaPredicted RBP16.63■□□□□ 0.25
CCDC130-211ENST00000589669 CCT4P50991 539 aaKnown RBP16.63■□□□□ 0.25
CCDC130-211ENST00000589669 HIRAP54198 1017 aaPredicted RBP16.63■□□□□ 0.25
CCDC130-211ENST00000589669 IFIT5Q13325 482 aaKnown RBP16.63■□□□□ 0.25
CCDC130-211ENST00000589669 PODNQ7Z5L7 613 aa16.63■□□□□ 0.25
CCDC130-211ENST00000589669 NBPF3Q9H094 633 aa16.63■□□□□ 0.25
CCDC130-211ENST00000589669 LMBR1LQ6UX01 489 aa16.62■□□□□ 0.25
CCDC130-211ENST00000589669 ADAMTSL1Q8N6G6 1762 aa16.61■□□□□ 0.25
CCDC130-211ENST00000589669 HRO43593 1189 aa16.61■□□□□ 0.25
CCDC130-211ENST00000589669 EPHA10Q5JZY3 1008 aa16.61■□□□□ 0.25
CCDC130-211ENST00000589669 TMEM134Q9H6X4 195 aa16.61■□□□□ 0.25
CCDC130-211ENST00000589669 UTYO14607 1347 aa16.61■□□□□ 0.25
CCDC130-211ENST00000589669 LTBP1Q14766 1721 aa16.61■□□□□ 0.25
CCDC130-211ENST00000589669 DIEXFQ68CQ4 756 aaKnown RBP16.6■□□□□ 0.25
CCDC130-211ENST00000589669 SHTN1A0MZ66 631 aa16.59■□□□□ 0.25
CCDC130-211ENST00000589669 NBPF7P0C2Y1 421 aaPredicted RBP16.59■□□□□ 0.25
CCDC130-211ENST00000589669 CHRNDQ07001 517 aa16.59■□□□□ 0.25
CCDC130-211ENST00000589669 CCDC57Q2TAC2 916 aa16.59■□□□□ 0.25
CCDC130-211ENST00000589669 RSBN1LQ6PCB5 846 aaPredicted RBP16.59■□□□□ 0.25
CCDC130-211ENST00000589669 CDAN1Q8IWY9 1227 aa16.59■□□□□ 0.25
CCDC130-211ENST00000589669 AGBL3Q8NEM8 1001 aa16.59■□□□□ 0.25
CCDC130-211ENST00000589669 KAZALD1Q96I82 304 aa16.59■□□□□ 0.25
CCDC130-211ENST00000589669 GMLQ99445 158 aa16.59■□□□□ 0.25
CCDC130-211ENST00000589669 COA1Q9GZY4 146 aa16.59■□□□□ 0.25
CCDC130-211ENST00000589669 ZNF804BA4D1E1 1349 aa16.59■□□□□ 0.25
CCDC130-211ENST00000589669 MED23Q9ULK4 1368 aa16.59■□□□□ 0.25
CCDC130-211ENST00000589669 USP17L3A6NCW0 530 aa16.58■□□□□ 0.24
CCDC130-211ENST00000589669 USP17L4A6NCW7 530 aa16.58■□□□□ 0.24
CCDC130-211ENST00000589669 CST9Q5W186 159 aa16.58■□□□□ 0.24
CCDC130-211ENST00000589669 CDC37L1Q7L3B6 337 aa16.58■□□□□ 0.24
CCDC130-211ENST00000589669 USP17L1Q7RTZ2 530 aa16.58■□□□□ 0.24
CCDC130-211ENST00000589669 SAMD7Q7Z3H4 446 aa16.58■□□□□ 0.24
CCDC130-211ENST00000589669 LAPTM4BQ86VI4 370 aa16.58■□□□□ 0.24
CCDC130-211ENST00000589669 TRPM4Q8TD43 1214 aa16.58■□□□□ 0.24
CCDC130-211ENST00000589669 CHMP3Q9Y3E7 222 aa16.58■□□□□ 0.24
CCDC130-211ENST00000589669 CNTNAP1P78357 1384 aa16.57■□□□□ 0.24
CCDC130-211ENST00000589669 MS4A1P11836 297 aa16.57■□□□□ 0.24
CCDC130-211ENST00000589669 ZNF280AP59817 542 aaPredicted RBP16.57■□□□□ 0.24
CCDC130-211ENST00000589669 LDHAL6AQ6ZMR3 332 aa16.57■□□□□ 0.24
CCDC130-211ENST00000589669 C15orf52Q6ZUT6 534 aaKnown RBP16.57■□□□□ 0.24
CCDC130-211ENST00000589669 TXNRD3Q86VQ6 643 aa16.57■□□□□ 0.24
CCDC130-211ENST00000589669 SUCLG2Q96I99 432 aa16.57■□□□□ 0.24
CCDC130-211ENST00000589669 USP44Q9H0E7 712 aa16.57■□□□□ 0.24
CCDC130-211ENST00000589669 SMC4Q9NTJ3 1288 aa16.57■□□□□ 0.24
CCDC130-211ENST00000589669 FAM217BQ9NTX9 383 aaPredicted RBP16.57■□□□□ 0.24
CCDC130-211ENST00000589669 DAXXQ9UER7 740 aaPredicted RBP16.57■□□□□ 0.24
CCDC130-211ENST00000589669 MKRN1Q9UHC7 482 aaKnown RBP16.57■□□□□ 0.24
CCDC130-211ENST00000589669 RASSF10A6NK89 507 aa16.56■□□□□ 0.24
CCDC130-211ENST00000589669 TRAF5O00463 557 aa16.56■□□□□ 0.24
CCDC130-211ENST00000589669 FMR1Q06787 632 aaKnown RBP eCLIP16.56■□□□□ 0.24
CCDC130-211ENST00000589669 DEFB115Q30KQ5 88 aa16.56■□□□□ 0.24
CCDC130-211ENST00000589669 RABL6Q3YEC7 729 aaPredicted RBP16.56■□□□□ 0.24
CCDC130-211ENST00000589669 TBC1D10BQ4KMP7 808 aaPredicted RBP16.56■□□□□ 0.24
CCDC130-211ENST00000589669 STRIP1Q5VSL9 837 aa16.56■□□□□ 0.24
CCDC130-211ENST00000589669 ZNF609O15014 1411 aa16.55■□□□□ 0.24
CCDC130-211ENST00000589669 EGFRP00533 1210 aa16.55■□□□□ 0.24
CCDC130-211ENST00000589669 MMP14P50281 582 aa16.55■□□□□ 0.24
CCDC130-211ENST00000589669 TAF7LQ5H9L4 462 aa16.55■□□□□ 0.24
CCDC130-211ENST00000589669 IRS2Q9Y4H2 1338 aa16.54■□□□□ 0.24
CCDC130-211ENST00000589669 TAF5LO75529 589 aa16.54■□□□□ 0.24
CCDC130-211ENST00000589669 USP17L8P0C7I0 530 aa16.54■□□□□ 0.24
CCDC130-211ENST00000589669 KCNJ4P48050 445 aa16.54■□□□□ 0.24
CCDC130-211ENST00000589669 VEGFBP49765 207 aa16.54■□□□□ 0.24
CCDC130-211ENST00000589669 DACT2Q5SW24 774 aa16.54■□□□□ 0.24
CCDC130-211ENST00000589669 HELBQ8NG08 1087 aaPredicted RBP16.54■□□□□ 0.24
CCDC130-211ENST00000589669 ZNF594Q96JF6 807 aaPredicted RBP16.54■□□□□ 0.24
CCDC130-211ENST00000589669 GLIS2Q9BZE0 524 aaPredicted RBP16.54■□□□□ 0.24
CCDC130-211ENST00000589669 NOB1Q9ULX3 412 aaKnown RBP16.54■□□□□ 0.24
CCDC130-211ENST00000589669 MYH3P11055 1940 aa16.54■□□□□ 0.24
CCDC130-211ENST00000589669 SNAP23O00161 211 aa16.53■□□□□ 0.24
CCDC130-211ENST00000589669 KLRK1P26718 216 aa16.53■□□□□ 0.24
CCDC130-211ENST00000589669 SSTR3P32745 418 aaPredicted RBP16.53■□□□□ 0.24
CCDC130-211ENST00000589669 RARSP54136 660 aaKnown RBP16.53■□□□□ 0.24
CCDC130-211ENST00000589669 SWT1Q5T5J6 900 aaKnown RBP16.53■□□□□ 0.24
CCDC130-211ENST00000589669 TTLL5Q6EMB2 1281 aa16.53■□□□□ 0.24
CCDC130-211ENST00000589669 USP48Q86UV5 1035 aa16.53■□□□□ 0.24
CCDC130-211ENST00000589669 FAM117AQ9C073 453 aa16.53■□□□□ 0.24
CCDC130-211ENST00000589669 BICC1Q9H694 974 aaKnown RBP16.53■□□□□ 0.24
CCDC130-211ENST00000589669 CNNM1Q9NRU3 951 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms