RNA–Protein interactions for RNA: ENST00000589349.5

DNMT1-219, Transcript of DNA methyltransferase 1, humanhuman

TSL 4

Gene DNMT1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-219ENST00000589349 U2SURPO15042 1029 aaKnown RBP11.05□□□□□ -0.64
DNMT1-219ENST00000589349 PLA2G4AP47712 749 aa11.05□□□□□ -0.64
DNMT1-219ENST00000589349 EPHA4P54764 986 aa11.05□□□□□ -0.64
DNMT1-219ENST00000589349 CABP4P57796 275 aa11.05□□□□□ -0.64
DNMT1-219ENST00000589349 DPYDQ12882 1025 aa11.05□□□□□ -0.64
DNMT1-219ENST00000589349 TNS4Q8IZW8 715 aa11.05□□□□□ -0.64
DNMT1-219ENST00000589349 NANOS1Q8WY41 292 aaKnown RBP11.05□□□□□ -0.64
DNMT1-219ENST00000589349 PIGBQ92521 554 aa11.05□□□□□ -0.64
DNMT1-219ENST00000589349 GMCL1Q96IK5 515 aa11.05□□□□□ -0.64
DNMT1-219ENST00000589349 GAS2L1Q99501 681 aaPredicted RBP11.05□□□□□ -0.64
DNMT1-219ENST00000589349 LRP5O75197 1615 aa11.05□□□□□ -0.64
DNMT1-219ENST00000589349 PALLDQ8WX93 1383 aa11.04□□□□□ -0.64
DNMT1-219ENST00000589349 H7C1W4 665 aa11.04□□□□□ -0.64
DNMT1-219ENST00000589349 F11P03951 625 aa11.04□□□□□ -0.64
DNMT1-219ENST00000589349 HSP90AB1P08238 724 aaKnown RBP11.04□□□□□ -0.64
DNMT1-219ENST00000589349 HMOX1P09601 288 aa11.04□□□□□ -0.64
DNMT1-219ENST00000589349 PHKG2P15735 406 aa11.04□□□□□ -0.64
DNMT1-219ENST00000589349 HMGB2P26583 209 aaKnown RBP11.04□□□□□ -0.64
DNMT1-219ENST00000589349 FOXK2Q01167 660 aa11.04□□□□□ -0.64
DNMT1-219ENST00000589349 AMOTQ4VCS5 1084 aa11.04□□□□□ -0.64
DNMT1-219ENST00000589349 RIPOR1Q6ZS17 1223 aa11.04□□□□□ -0.64
DNMT1-219ENST00000589349 AEBP1Q8IUX7 1158 aa11.04□□□□□ -0.64
DNMT1-219ENST00000589349 PBXIP1Q96AQ6 731 aa11.04□□□□□ -0.64
DNMT1-219ENST00000589349 ARXQ96QS3 562 aa11.04□□□□□ -0.64
DNMT1-219ENST00000589349 C1orf115Q9H7X2 142 aa11.04□□□□□ -0.64
DNMT1-219ENST00000589349 DOT1LQ8TEK3 1739 aa11.04□□□□□ -0.64
DNMT1-219ENST00000589349 MSL1Q68DK7 614 aa11.03□□□□□ -0.64
DNMT1-219ENST00000589349 SLC9A9Q8IVB4 645 aa11.03□□□□□ -0.64
DNMT1-219ENST00000589349 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.02□□□□□ -0.65
DNMT1-219ENST00000589349 CDC14CA4D256 554 aa11.02□□□□□ -0.65
DNMT1-219ENST00000589349 DIAPH1O60610 1272 aaKnown RBP11.02□□□□□ -0.65
DNMT1-219ENST00000589349 LCE2AQ5TA79 106 aaPredicted RBP11.02□□□□□ -0.65
DNMT1-219ENST00000589349 SV2AQ7L0J3 742 aa11.02□□□□□ -0.65
DNMT1-219ENST00000589349 TRIM22Q8IYM9 498 aa11.02□□□□□ -0.65
DNMT1-219ENST00000589349 TSEN2Q8NCE0 465 aaKnown RBP11.02□□□□□ -0.65
DNMT1-219ENST00000589349 C1orf216Q8TAB5 229 aa11.02□□□□□ -0.65
DNMT1-219ENST00000589349 ASAP1Q9ULH1 1129 aa11.02□□□□□ -0.65
DNMT1-219ENST00000589349 CHMP3Q9Y3E7 222 aa11.02□□□□□ -0.65
DNMT1-219ENST00000589349 RGPD3A6NKT7 1758 aaPredicted RBP11.02□□□□□ -0.65
DNMT1-219ENST00000589349 RGPD4Q7Z3J3 1758 aa11.02□□□□□ -0.65
DNMT1-219ENST00000589349 ERBB4Q15303 1308 aa11.02□□□□□ -0.65
DNMT1-219ENST00000589349 IGSF1Q8N6C5 1336 aa11.02□□□□□ -0.65
DNMT1-219ENST00000589349 LOC102724428A0A0B4J2F2 783 aa11.01□□□□□ -0.65
DNMT1-219ENST00000589349 IL13P35225 146 aa11.01□□□□□ -0.65
DNMT1-219ENST00000589349 SIK1P57059 783 aa11.01□□□□□ -0.65
DNMT1-219ENST00000589349 ZNF295-AS1Q8N0V1 137 aa11.01□□□□□ -0.65
DNMT1-219ENST00000589349 PGBD3Q8N328 593 aa11.01□□□□□ -0.65
DNMT1-219ENST00000589349 FAM200AQ8TCP9 573 aa11.01□□□□□ -0.65
DNMT1-219ENST00000589349 DCAF5Q96JK2 942 aa11.01□□□□□ -0.65
DNMT1-219ENST00000589349 CFAP53Q96M91 514 aa11.01□□□□□ -0.65
DNMT1-219ENST00000589349 NOVA2Q9UNW9 492 aaKnown RBP11.01□□□□□ -0.65
DNMT1-219ENST00000589349 USP3Q9Y6I4 520 aa11.01□□□□□ -0.65
DNMT1-219ENST00000589349 PNPLA7Q6ZV29 1317 aa11.01□□□□□ -0.65
DNMT1-219ENST00000589349 PTCD1O75127 700 aaKnown RBP11□□□□□ -0.65
DNMT1-219ENST00000589349 PSMA6P60900 246 aaKnown RBP11□□□□□ -0.65
DNMT1-219ENST00000589349 ELOAQ14241 798 aaKnown RBP11□□□□□ -0.65
DNMT1-219ENST00000589349 TEAD4Q15561 434 aa11□□□□□ -0.65
DNMT1-219ENST00000589349 GPR162Q16538 588 aa11□□□□□ -0.65
DNMT1-219ENST00000589349 COL23A1Q86Y22 540 aaPredicted RBP11□□□□□ -0.65
DNMT1-219ENST00000589349 VWA5B2Q8N398 1253 aa11□□□□□ -0.65
DNMT1-219ENST00000589349 AIDAQ96BJ3 306 aa11□□□□□ -0.65
DNMT1-219ENST00000589349 GPAMQ9HCL2 828 aa11□□□□□ -0.65
DNMT1-219ENST00000589349 ANKRD26Q9UPS8 1709 aa10.99□□□□□ -0.65
DNMT1-219ENST00000589349 ERVV-2B6SEH9 535 aa10.99□□□□□ -0.65
DNMT1-219ENST00000589349 ATG7O95352 703 aa10.99□□□□□ -0.65
DNMT1-219ENST00000589349 YY1P25490 414 aa10.99□□□□□ -0.65
DNMT1-219ENST00000589349 MSX1P28360 303 aa10.99□□□□□ -0.65
DNMT1-219ENST00000589349 SMIM5Q71RC9 77 aa10.99□□□□□ -0.65
DNMT1-219ENST00000589349 FLAD1Q8NFF5 587 aa10.99□□□□□ -0.65
DNMT1-219ENST00000589349 HINFPQ9BQA5 517 aa10.99□□□□□ -0.65
DNMT1-219ENST00000589349 SYT17Q9BSW7 474 aa10.99□□□□□ -0.65
DNMT1-219ENST00000589349 TSPAN10Q9H1Z9 355 aaPredicted RBP10.99□□□□□ -0.65
DNMT1-219ENST00000589349 ZDHHC3Q9NYG2 299 aa10.99□□□□□ -0.65
DNMT1-219ENST00000589349 LBRQ14739 615 aaKnown RBP10.98□□□□□ -0.65
DNMT1-219ENST00000589349 FOXR1Q6PIV2 292 aa10.98□□□□□ -0.65
DNMT1-219ENST00000589349 GAS2L2Q8NHY3 880 aa10.98□□□□□ -0.65
DNMT1-219ENST00000589349 ZNF837Q96EG3 531 aaPredicted RBP10.98□□□□□ -0.65
DNMT1-219ENST00000589349 NUCKS1Q9H1E3 243 aaKnown RBP10.98□□□□□ -0.65
DNMT1-219ENST00000589349 ATG3Q9NT62 314 aa10.98□□□□□ -0.65
DNMT1-219ENST00000589349 CUEDC1Q9NWM3 386 aaPredicted RBP10.98□□□□□ -0.65
DNMT1-219ENST00000589349 SERTM1A2A2V5 107 aa10.97□□□□□ -0.65
DNMT1-219ENST00000589349 NOS2P35228 1153 aa10.97□□□□□ -0.65
DNMT1-219ENST00000589349 TBCELQ5QJ74 424 aa10.97□□□□□ -0.65
DNMT1-219ENST00000589349 LINC00116Q8NCU8 138 aa10.97□□□□□ -0.65
DNMT1-219ENST00000589349 ZNF232Q9UNY5 417 aa10.97□□□□□ -0.65
DNMT1-219ENST00000589349 NUDCQ9Y266 331 aa10.97□□□□□ -0.65
DNMT1-219ENST00000589349 SHANK3Q9BYB0 1731 aa10.97□□□□□ -0.65
DNMT1-219ENST00000589349 GMPRP36959 345 aa10.96□□□□□ -0.65
DNMT1-219ENST00000589349 DBN1Q16643 649 aa10.96□□□□□ -0.65
DNMT1-219ENST00000589349 AKAP4Q5JQC9 854 aa10.96□□□□□ -0.65
DNMT1-219ENST00000589349 EFHC2Q5JST6 749 aa10.96□□□□□ -0.65
DNMT1-219ENST00000589349 LCE2CQ5TA81 110 aa10.96□□□□□ -0.65
DNMT1-219ENST00000589349 CRISPLD1Q9H336 500 aa10.96□□□□□ -0.65
DNMT1-219ENST00000589349 NCAPD2Q15021 1401 aa10.95□□□□□ -0.66
DNMT1-219ENST00000589349 WIPF1O43516 503 aa10.95□□□□□ -0.66
DNMT1-219ENST00000589349 PPP1R12BO60237 982 aaPredicted RBP10.95□□□□□ -0.66
DNMT1-219ENST00000589349 U2AF1L5P0DN76 240 aaPredicted RBP10.95□□□□□ -0.66
DNMT1-219ENST00000589349 U2AF1Q01081 240 aaKnown RBP eCLIP10.95□□□□□ -0.66
DNMT1-219ENST00000589349 ITPK1Q13572 414 aa10.95□□□□□ -0.66
DNMT1-219ENST00000589349 TRAPPC3LQ5T215 181 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms