RNA–Protein interactions for RNA: ENST00000589318.5

DDX39A-209, Transcript of DExD-box helicase 39A, human

TSL 1 (best)

Gene DDX39A, Length 1,903 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX39A-209	ENST00000589318	FGA	P02671	866 aa		18.27	■□□□□ 0.51
DDX39A-209	ENST00000589318	SRGN	P10124	158 aa		18.27	■□□□□ 0.51
DDX39A-209	ENST00000589318	BLOC1S2	Q6QNY1	142 aa		18.27	■□□□□ 0.51
DDX39A-209	ENST00000589318	STRBP	Q96SI9	672 aa	Known RBP	18.27	■□□□□ 0.51
DDX39A-209	ENST00000589318	STK32B	Q9NY57	414 aa		18.27	■□□□□ 0.51
DDX39A-209	ENST00000589318	MSN	P26038	577 aa	Known RBP	18.26	■□□□□ 0.51
DDX39A-209	ENST00000589318	DEFB132	Q7Z7B7	95 aa		18.26	■□□□□ 0.51
DDX39A-209	ENST00000589318	INTS4	Q96HW7	963 aa	Known RBP	18.26	■□□□□ 0.51
DDX39A-209	ENST00000589318	NEK1	Q96PY6	1258 aa		18.26	■□□□□ 0.51
DDX39A-209	ENST00000589318	LARP6	Q9BRS8	491 aa	Known RBP	18.26	■□□□□ 0.51
DDX39A-209	ENST00000589318	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	18.26	■□□□□ 0.51
DDX39A-209	ENST00000589318	LRP2BP	Q9P2M1	347 aa		18.26	■□□□□ 0.51
DDX39A-209	ENST00000589318	LIMCH1	Q9UPQ0	1083 aa		18.26	■□□□□ 0.51
DDX39A-209	ENST00000589318	LARGE1	O95461	756 aa		18.25	■□□□□ 0.51
DDX39A-209	ENST00000589318	ZNF384	Q8TF68	577 aa		18.25	■□□□□ 0.51
DDX39A-209	ENST00000589318	RAB3GAP1	Q15042	981 aa		18.25	■□□□□ 0.51
DDX39A-209	ENST00000589318	TCEANC2	Q96MN5	208 aa		18.25	■□□□□ 0.51
DDX39A-209	ENST00000589318	CWC22	Q9HCG8	908 aa	Known RBP	18.25	■□□□□ 0.51
DDX39A-209	ENST00000589318	ABCF2	Q9UG63	623 aa		18.25	■□□□□ 0.51
DDX39A-209	ENST00000589318	MAST2	Q6P0Q8	1798 aa		18.25	■□□□□ 0.51
DDX39A-209	ENST00000589318	BAG6	P46379	1132 aa		18.24	■□□□□ 0.51
DDX39A-209	ENST00000589318	TOB2	Q14106	344 aa	Predicted RBP	18.24	■□□□□ 0.51
DDX39A-209	ENST00000589318	ADGRA1	Q86SQ6	560 aa		18.24	■□□□□ 0.51
DDX39A-209	ENST00000589318	AIDA	Q96BJ3	306 aa		18.24	■□□□□ 0.51
DDX39A-209	ENST00000589318	GPR101	Q96P66	508 aa	Predicted RBP	18.24	■□□□□ 0.51
DDX39A-209	ENST00000589318	CTNNA3	Q9UI47	895 aa		18.24	■□□□□ 0.51
DDX39A-209	ENST00000589318	CCDC88A	Q3V6T2	1871 aa		18.24	■□□□□ 0.51
DDX39A-209	ENST00000589318		E7EWF7	191 aa		18.23	■□□□□ 0.51
DDX39A-209	ENST00000589318	MBD4	O95243	580 aa		18.23	■□□□□ 0.51
DDX39A-209	ENST00000589318	NPR1	P16066	1061 aa		18.23	■□□□□ 0.51
DDX39A-209	ENST00000589318	NSFL1C	Q9UNZ2	370 aa	Known RBP	18.23	■□□□□ 0.51
DDX39A-209	ENST00000589318	PPEF1	O14829	653 aa	Predicted RBP	18.23	■□□□□ 0.51
DDX39A-209	ENST00000589318	ATP2B4	P23634	1241 aa		18.23	■□□□□ 0.51
DDX39A-209	ENST00000589318	PDE6B	P35913	854 aa		18.23	■□□□□ 0.51
DDX39A-209	ENST00000589318	TMC4	Q7Z404	712 aa		18.23	■□□□□ 0.51
DDX39A-209	ENST00000589318	ARMT1	Q9H993	441 aa		18.23	■□□□□ 0.51
DDX39A-209	ENST00000589318	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	18.23	■□□□□ 0.51
DDX39A-209	ENST00000589318	KIAA1551	Q9HCM1	1747 aa		18.23	■□□□□ 0.51
DDX39A-209	ENST00000589318	DUOX1	Q9NRD9	1551 aa		18.22	■□□□□ 0.51
DDX39A-209	ENST00000589318	UFL1	O94874	794 aa		18.22	■□□□□ 0.51
DDX39A-209	ENST00000589318	ST3GAL1	Q11201	340 aa		18.22	■□□□□ 0.51
DDX39A-209	ENST00000589318	SP8	Q8IXZ3	490 aa		18.22	■□□□□ 0.51
DDX39A-209	ENST00000589318	LCORL	Q8N3X6	602 aa		18.22	■□□□□ 0.51
DDX39A-209	ENST00000589318	TDRD7	Q8NHU6	1098 aa	Known RBP	18.22	■□□□□ 0.51
DDX39A-209	ENST00000589318	PDGFD	Q9GZP0	370 aa	Predicted RBP	18.22	■□□□□ 0.51
DDX39A-209	ENST00000589318	RAI14	Q9P0K7	980 aa		18.22	■□□□□ 0.51
DDX39A-209	ENST00000589318	POLL	Q9UGP5	575 aa		18.22	■□□□□ 0.51
DDX39A-209	ENST00000589318	GGA1	Q9UJY5	639 aa		18.22	■□□□□ 0.51
DDX39A-209	ENST00000589318	TPCN1	Q9ULQ1	816 aa		18.22	■□□□□ 0.51
DDX39A-209	ENST00000589318	ZMYM6	O95789	1325 aa		18.22	■□□□□ 0.51
DDX39A-209	ENST00000589318	NCL	P19338	710 aa	Known RBP	18.21	■□□□□ 0.51
DDX39A-209	ENST00000589318	HAND2	P61296	217 aa		18.21	■□□□□ 0.51
DDX39A-209	ENST00000589318	SF3B2	Q13435	895 aa	Known RBP	18.21	■□□□□ 0.51
DDX39A-209	ENST00000589318	PKP1	Q13835	747 aa		18.21	■□□□□ 0.51
DDX39A-209	ENST00000589318	ALX1	Q15699	326 aa		18.21	■□□□□ 0.51
DDX39A-209	ENST00000589318	IMMT	Q16891	758 aa	Known RBP	18.21	■□□□□ 0.51
DDX39A-209	ENST00000589318	CSPP1	Q1MSJ5	1256 aa		18.21	■□□□□ 0.51
DDX39A-209	ENST00000589318	NBPF3	Q9H094	633 aa		18.21	■□□□□ 0.51
DDX39A-209	ENST00000589318	ATP6V0A2	Q9Y487	856 aa		18.21	■□□□□ 0.51
DDX39A-209	ENST00000589318	CHD4	Q14839	1912 aa		18.21	■□□□□ 0.51
DDX39A-209	ENST00000589318	CYP7A1	P22680	504 aa		18.21	■□□□□ 0.51
DDX39A-209	ENST00000589318	ME3	Q16798	604 aa		18.21	■□□□□ 0.51
DDX39A-209	ENST00000589318	TBC1D16	Q8TBP0	767 aa		18.21	■□□□□ 0.51
DDX39A-209	ENST00000589318	TNPO1	Q92973	898 aa	Known RBP	18.21	■□□□□ 0.51
DDX39A-209	ENST00000589318	GSG1L2	A8MUP6	293 aa		18.2	■□□□□ 0.5
DDX39A-209	ENST00000589318	PATL2	C9JE40	543 aa	Known RBP	18.2	■□□□□ 0.5
DDX39A-209	ENST00000589318	HMGB1	P09429	215 aa	Known RBP	18.2	■□□□□ 0.5
DDX39A-209	ENST00000589318	MCM5	P33992	734 aa		18.2	■□□□□ 0.5
DDX39A-209	ENST00000589318	EXOSC10	Q01780	885 aa	Known RBP	18.2	■□□□□ 0.5
DDX39A-209	ENST00000589318	CHAF1A	Q13111	956 aa	Predicted RBP	18.2	■□□□□ 0.5
DDX39A-209	ENST00000589318	MIGA1	Q8NAN2	632 aa		18.2	■□□□□ 0.5
DDX39A-209	ENST00000589318	NSUN4	Q96CB9	384 aa	Known RBP	18.2	■□□□□ 0.5
DDX39A-209	ENST00000589318	MASTL	Q96GX5	879 aa		18.2	■□□□□ 0.5
DDX39A-209	ENST00000589318	ZSCAN31	Q96LW9	406 aa	Predicted RBP	18.2	■□□□□ 0.5
DDX39A-209	ENST00000589318	SH2B1	Q9NRF2	756 aa	Predicted RBP	18.2	■□□□□ 0.5
DDX39A-209	ENST00000589318	GOLGA6L22	H0YM25	854 aa		18.19	■□□□□ 0.5
DDX39A-209	ENST00000589318	DYNC1I1	O14576	645 aa		18.19	■□□□□ 0.5
DDX39A-209	ENST00000589318	ZNF500	O60304	480 aa	Predicted RBP	18.19	■□□□□ 0.5
DDX39A-209	ENST00000589318	PRDX5	P30044	214 aa		18.19	■□□□□ 0.5
DDX39A-209	ENST00000589318	NASP	P49321	788 aa	Predicted RBP	18.19	■□□□□ 0.5
DDX39A-209	ENST00000589318	ANKRD1	Q15327	319 aa		18.19	■□□□□ 0.5
DDX39A-209	ENST00000589318	DHX32	Q7L7V1	743 aa	Known RBP	18.19	■□□□□ 0.5
DDX39A-209	ENST00000589318	ZNF804A	Q7Z570	1209 aa		18.19	■□□□□ 0.5
DDX39A-209	ENST00000589318	RIOK1	Q9BRS2	568 aa	Known RBP	18.19	■□□□□ 0.5
DDX39A-209	ENST00000589318	AGXT2	Q9BYV1	514 aa		18.19	■□□□□ 0.5
DDX39A-209	ENST00000589318	TIAM2	Q8IVF5	1701 aa		18.19	■□□□□ 0.5
DDX39A-209	ENST00000589318	SALL1	Q9NSC2	1324 aa		18.19	■□□□□ 0.5
DDX39A-209	ENST00000589318	PRKAB2	O43741	272 aa		18.19	■□□□□ 0.5
DDX39A-209	ENST00000589318	MECOM	Q03112	1051 aa		18.19	■□□□□ 0.5
DDX39A-209	ENST00000589318	UTP14C	Q5TAP6	766 aa	Known RBP	18.19	■□□□□ 0.5
DDX39A-209	ENST00000589318	IFNL3	Q8IZI9	196 aa		18.19	■□□□□ 0.5
DDX39A-209	ENST00000589318	ZDHHC9	Q9Y397	364 aa		18.19	■□□□□ 0.5
DDX39A-209	ENST00000589318	ZNF213	O14771	459 aa		18.18	■□□□□ 0.5
DDX39A-209	ENST00000589318	GNAT2	P19087	354 aa		18.18	■□□□□ 0.5
DDX39A-209	ENST00000589318	ALDH1B1	P30837	517 aa		18.18	■□□□□ 0.5
DDX39A-209	ENST00000589318	OLFM4	Q6UX06	510 aa		18.18	■□□□□ 0.5
DDX39A-209	ENST00000589318	CLEC17A	Q6ZS10	378 aa		18.18	■□□□□ 0.5
DDX39A-209	ENST00000589318		Q6ZUG5	572 aa		18.18	■□□□□ 0.5
DDX39A-209	ENST00000589318	CD209	Q9NNX6	404 aa		18.18	■□□□□ 0.5
DDX39A-209	ENST00000589318	JAG2	Q9Y219	1238 aa		18.18	■□□□□ 0.5

Retrieved 100 of 20,778 RNA–protein pairs in 107.8 ms