RNA–Protein interactions for RNA: ENST00000589285.1

ZNF540-207, Transcript of zinc finger protein 540, humanhuman

Gene ZNF540, Length 3,106 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-207ENST00000589285 PLA2G4EQ3MJ16 856 aa4.99□□□□□ -1.61
ZNF540-207ENST00000589285 SNAPC4Q5SXM2 1469 aa4.99□□□□□ -1.61
ZNF540-207ENST00000589285 C9orf131Q5VYM1 1079 aa4.99□□□□□ -1.61
ZNF540-207ENST00000589285 DMRTB1Q96MA1 342 aa4.99□□□□□ -1.61
ZNF540-207ENST00000589285 EAPPQ56P03 285 aaPredicted RBP4.99□□□□□ -1.61
ZNF540-207ENST00000589285 C3orf58Q8NDZ4 430 aa4.99□□□□□ -1.61
ZNF540-207ENST00000589285 SOX13Q9UN79 622 aa4.99□□□□□ -1.61
ZNF540-207ENST00000589285 CDK8P49336 464 aa4.99□□□□□ -1.61
ZNF540-207ENST00000589285 GSTM4Q03013 218 aa4.99□□□□□ -1.61
ZNF540-207ENST00000589285 GRIN3AQ8TCU5 1115 aa4.99□□□□□ -1.61
ZNF540-207ENST00000589285 RBSNQ9H1K0 784 aa4.99□□□□□ -1.61
ZNF540-207ENST00000589285 LGR6Q9HBX8 967 aa4.99□□□□□ -1.61
ZNF540-207ENST00000589285 USP17L7P0C7H9 530 aa4.98□□□□□ -1.61
ZNF540-207ENST00000589285 CDC27P30260 824 aa4.98□□□□□ -1.61
ZNF540-207ENST00000589285 IREB2P48200 963 aaKnown RBP4.98□□□□□ -1.61
ZNF540-207ENST00000589285 ESRRAP11474 423 aaPredicted RBP4.98□□□□□ -1.61
ZNF540-207ENST00000589285 ZNF16P17020 682 aaPredicted RBP4.98□□□□□ -1.61
ZNF540-207ENST00000589285 IKBKEQ14164 716 aa4.98□□□□□ -1.61
ZNF540-207ENST00000589285 DTHD1Q6ZMT9 781 aa4.98□□□□□ -1.61
ZNF540-207ENST00000589285 ALKBH8Q96BT7 664 aaKnown RBP4.98□□□□□ -1.61
ZNF540-207ENST00000589285 BSNDQ8WZ55 320 aa4.97□□□□□ -1.61
ZNF540-207ENST00000589285 TLR6Q9Y2C9 796 aa4.97□□□□□ -1.61
ZNF540-207ENST00000589285 TRIM28Q13263 835 aaKnown RBP4.97□□□□□ -1.61
ZNF540-207ENST00000589285 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.97□□□□□ -1.61
ZNF540-207ENST00000589285 SCARF2Q96GP6 870 aaPredicted RBP4.97□□□□□ -1.61
ZNF540-207ENST00000589285 GPN3Q9UHW5 284 aaPredicted RBP4.97□□□□□ -1.61
ZNF540-207ENST00000589285 KIAA0586Q9BVV6 1533 aa4.97□□□□□ -1.61
ZNF540-207ENST00000589285 PTPRAP18433 802 aa4.97□□□□□ -1.61
ZNF540-207ENST00000589285 PTPN11Q06124 597 aaPredicted RBP4.97□□□□□ -1.61
ZNF540-207ENST00000589285 DOC2BQ14184 412 aa4.97□□□□□ -1.61
ZNF540-207ENST00000589285 TMEM102Q8N9M5 508 aaPredicted RBP4.97□□□□□ -1.61
ZNF540-207ENST00000589285 ZNF576Q9H609 170 aa4.96□□□□□ -1.62
ZNF540-207ENST00000589285 CSADQ9Y600 493 aa4.96□□□□□ -1.62
ZNF540-207ENST00000589285 CEP162Q5TB80 1403 aa4.96□□□□□ -1.62
ZNF540-207ENST00000589285 RPLP1P05386 114 aaKnown RBP4.96□□□□□ -1.62
ZNF540-207ENST00000589285 HOXD8P13378 290 aaPredicted RBP4.96□□□□□ -1.62
ZNF540-207ENST00000589285 MAOBP27338 520 aa4.96□□□□□ -1.62
ZNF540-207ENST00000589285 PCDH1Q08174 1060 aa4.96□□□□□ -1.62
ZNF540-207ENST00000589285 ACAD11Q709F0 780 aa4.96□□□□□ -1.62
ZNF540-207ENST00000589285 RGS22Q8NE09 1264 aa4.96□□□□□ -1.62
ZNF540-207ENST00000589285 MEGF10Q96KG7 1140 aa4.96□□□□□ -1.62
ZNF540-207ENST00000589285 CITED4Q96RK1 184 aa4.96□□□□□ -1.62
ZNF540-207ENST00000589285 BHLHE41Q9C0J9 482 aaPredicted RBP4.96□□□□□ -1.62
ZNF540-207ENST00000589285 FRRS1LQ9P0K9 344 aa4.96□□□□□ -1.62
ZNF540-207ENST00000589285 CEP170Q5SW79 1584 aa4.95□□□□□ -1.62
ZNF540-207ENST00000589285 ENC1O14682 589 aa4.95□□□□□ -1.62
ZNF540-207ENST00000589285 GLB1P16278 677 aa4.95□□□□□ -1.62
ZNF540-207ENST00000589285 KANK3Q6NY19 840 aa4.95□□□□□ -1.62
ZNF540-207ENST00000589285 CLEC4MQ9H2X3 399 aaPredicted RBP4.95□□□□□ -1.62
ZNF540-207ENST00000589285 GRIN2AQ12879 1464 aa4.95□□□□□ -1.62
ZNF540-207ENST00000589285 FURINP09958 794 aa4.95□□□□□ -1.62
ZNF540-207ENST00000589285 CD68P34810 354 aaPredicted RBP4.95□□□□□ -1.62
ZNF540-207ENST00000589285 ILDR2Q71H61 639 aa4.95□□□□□ -1.62
ZNF540-207ENST00000589285 SHISA5Q8N114 240 aa4.95□□□□□ -1.62
ZNF540-207ENST00000589285 UBL7Q96S82 380 aaPredicted RBP4.95□□□□□ -1.62
ZNF540-207ENST00000589285 C11orf16Q9NQ32 467 aa4.95□□□□□ -1.62
ZNF540-207ENST00000589285 COPRSQ9NQ92 184 aa4.95□□□□□ -1.62
ZNF540-207ENST00000589285 SEC31BQ9NQW1 1179 aa4.95□□□□□ -1.62
ZNF540-207ENST00000589285 LRRC4BQ9NT99 713 aa4.95□□□□□ -1.62
ZNF540-207ENST00000589285 PCDHGB7Q9Y5F8 929 aa4.95□□□□□ -1.62
ZNF540-207ENST00000589285 FHAD1B1AJZ9 1412 aa4.95□□□□□ -1.62
ZNF540-207ENST00000589285 CLIP1P30622 1438 aa4.95□□□□□ -1.62
ZNF540-207ENST00000589285 LOC100289279A0A1B0GTE1 492 aa4.94□□□□□ -1.62
ZNF540-207ENST00000589285 TMEM238LA0A1B0GVL6 79 aa4.94□□□□□ -1.62
ZNF540-207ENST00000589285 H3BRJ5 948 aa4.94□□□□□ -1.62
ZNF540-207ENST00000589285 MBTPS1Q14703 1052 aa4.94□□□□□ -1.62
ZNF540-207ENST00000589285 MAP1SQ66K74 1059 aaPredicted RBP4.94□□□□□ -1.62
ZNF540-207ENST00000589285 GOLGA3Q08378 1498 aa4.94□□□□□ -1.62
ZNF540-207ENST00000589285 FHOD3Q2V2M9 1422 aa4.94□□□□□ -1.62
ZNF540-207ENST00000589285 DIP2BQ9P265 1576 aa4.94□□□□□ -1.62
ZNF540-207ENST00000589285 LIG1P18858 919 aa4.94□□□□□ -1.62
ZNF540-207ENST00000589285 NOS3P29474 1203 aa4.94□□□□□ -1.62
ZNF540-207ENST00000589285 RBM25P49756 843 aaKnown RBP4.94□□□□□ -1.62
ZNF540-207ENST00000589285 PSMD2Q13200 908 aa4.94□□□□□ -1.62
ZNF540-207ENST00000589285 TSNAXIP1Q2TAA8 658 aa4.94□□□□□ -1.62
ZNF540-207ENST00000589285 LDLRAD1Q5T700 205 aa4.94□□□□□ -1.62
ZNF540-207ENST00000589285 TMEM151AQ8N4L1 468 aa4.94□□□□□ -1.62
ZNF540-207ENST00000589285 BACH2Q9BYV9 841 aa4.94□□□□□ -1.62
ZNF540-207ENST00000589285 CBX8Q9HC52 389 aa4.94□□□□□ -1.62
ZNF540-207ENST00000589285 KIAA1522Q9P206 1035 aaPredicted RBP4.94□□□□□ -1.62
ZNF540-207ENST00000589285 DUOXA2Q1HG44 320 aa4.94□□□□□ -1.62
ZNF540-207ENST00000589285 KIAA1211Q6ZU35 1233 aa4.94□□□□□ -1.62
ZNF540-207ENST00000589285 NRSN2Q9GZP1 204 aa4.94□□□□□ -1.62
ZNF540-207ENST00000589285 MAP3K4Q9Y6R4 1608 aa4.93□□□□□ -1.62
ZNF540-207ENST00000589285 PROCP04070 461 aa4.93□□□□□ -1.62
ZNF540-207ENST00000589285 GNA15P30679 374 aa4.93□□□□□ -1.62
ZNF540-207ENST00000589285 KCNMA1Q12791 1236 aa4.93□□□□□ -1.62
ZNF540-207ENST00000589285 PCSK7Q16549 785 aa4.93□□□□□ -1.62
ZNF540-207ENST00000589285 KIAA0319Q5VV43 1072 aa4.93□□□□□ -1.62
ZNF540-207ENST00000589285 KCNB2Q92953 911 aa4.93□□□□□ -1.62
ZNF540-207ENST00000589285 EFCC1Q9HA90 598 aa4.93□□□□□ -1.62
ZNF540-207ENST00000589285 VTI1BQ9UEU0 232 aa4.93□□□□□ -1.62
ZNF540-207ENST00000589285 TTF2Q9UNY4 1162 aaKnown RBP4.93□□□□□ -1.62
ZNF540-207ENST00000589285 PRPF40AO75400 957 aaKnown RBP4.93□□□□□ -1.62
ZNF540-207ENST00000589285 SPATA31C1P0DKV0 1188 aa4.93□□□□□ -1.62
ZNF540-207ENST00000589285 ELNP15502 786 aa4.93□□□□□ -1.62
ZNF540-207ENST00000589285 ATP2B2Q01814 1243 aa4.93□□□□□ -1.62
ZNF540-207ENST00000589285 XPCQ01831 940 aaPredicted RBP4.93□□□□□ -1.62
ZNF540-207ENST00000589285 AKAP4Q5JQC9 854 aa4.93□□□□□ -1.62
ZNF540-207ENST00000589285 SPOCK3Q9BQ16 436 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms