RNA–Protein interactions for RNA: ENST00000589116.1

CCBE1-203, Transcript of collagen and calcium binding EGF domains 1, humanhuman

TSL 1 (best)

Gene CCBE1, Length 1,691 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-203ENST00000589116 IQSEC3Q9UPP2 1182 aaPredicted RBP14.39□□□□□ -0.11
CCBE1-203ENST00000589116 KIAA1551Q9HCM1 1747 aa14.39□□□□□ -0.11
CCBE1-203ENST00000589116 CCDC88AQ3V6T2 1871 aa14.38□□□□□ -0.11
CCBE1-203ENST00000589116 LAMA4Q16363 1823 aa14.38□□□□□ -0.11
CCBE1-203ENST00000589116 CYP21A2P08686 494 aa14.38□□□□□ -0.11
CCBE1-203ENST00000589116 ZGPATQ8N5A5 531 aaKnown RBP14.38□□□□□ -0.11
CCBE1-203ENST00000589116 AIDAQ96BJ3 306 aa14.38□□□□□ -0.11
CCBE1-203ENST00000589116 CIZ1Q9ULV3 898 aaPredicted RBP14.38□□□□□ -0.11
CCBE1-203ENST00000589116 ZMYM6O95789 1325 aa14.38□□□□□ -0.11
CCBE1-203ENST00000589116 SALL1Q9NSC2 1324 aa14.38□□□□□ -0.11
CCBE1-203ENST00000589116 BLOC1S2Q6QNY1 142 aa14.37□□□□□ -0.11
CCBE1-203ENST00000589116 TXNRD3Q86VQ6 643 aa14.37□□□□□ -0.11
CCBE1-203ENST00000589116 JMYQ8N9B5 988 aa14.37□□□□□ -0.11
CCBE1-203ENST00000589116 TDRD7Q8NHU6 1098 aaKnown RBP14.37□□□□□ -0.11
CCBE1-203ENST00000589116 CHMP5Q9NZZ3 219 aa14.37□□□□□ -0.11
CCBE1-203ENST00000589116 ABCF2Q9UG63 623 aa14.37□□□□□ -0.11
CCBE1-203ENST00000589116 H0YIN7 160 aa14.36□□□□□ -0.11
CCBE1-203ENST00000589116 FOXP2O15409 715 aa14.36□□□□□ -0.11
CCBE1-203ENST00000589116 HMGB1P09429 215 aaKnown RBP14.36□□□□□ -0.11
CCBE1-203ENST00000589116 GNAT2P19087 354 aa14.36□□□□□ -0.11
CCBE1-203ENST00000589116 DDIT3P35638 169 aa14.36□□□□□ -0.11
CCBE1-203ENST00000589116 C10orf71Q711Q0 1435 aa14.36□□□□□ -0.11
CCBE1-203ENST00000589116 C2CD5Q86YS7 1000 aa14.36□□□□□ -0.11
CCBE1-203ENST00000589116 TBC1D16Q8TBP0 767 aa14.36□□□□□ -0.11
CCBE1-203ENST00000589116 WDR66Q8TBY9 1149 aa14.36□□□□□ -0.11
CCBE1-203ENST00000589116 TMX3Q96JJ7 454 aa14.36□□□□□ -0.11
CCBE1-203ENST00000589116 TMX4Q9H1E5 349 aaPredicted RBP14.36□□□□□ -0.11
CCBE1-203ENST00000589116 ALDH8A1Q9H2A2 487 aaPredicted RBP14.36□□□□□ -0.11
CCBE1-203ENST00000589116 RAI14Q9P0K7 980 aa14.36□□□□□ -0.11
CCBE1-203ENST00000589116 DLEC1Q9Y238 1755 aa14.36□□□□□ -0.11
CCBE1-203ENST00000589116 AK2P54819 239 aa14.36□□□□□ -0.11
CCBE1-203ENST00000589116 CUL4AQ13619 759 aa14.36□□□□□ -0.11
CCBE1-203ENST00000589116 IMMTQ16891 758 aaKnown RBP14.36□□□□□ -0.11
CCBE1-203ENST00000589116 SPTY2D1Q68D10 685 aaPredicted RBP14.36□□□□□ -0.11
CCBE1-203ENST00000589116 SPRYD3Q8NCJ5 442 aa14.36□□□□□ -0.11
CCBE1-203ENST00000589116 STRBPQ96SI9 672 aaKnown RBP14.36□□□□□ -0.11
CCBE1-203ENST00000589116 PDRG1Q9NUG6 133 aa14.36□□□□□ -0.11
CCBE1-203ENST00000589116 IL1R1P14778 569 aa14.35□□□□□ -0.11
CCBE1-203ENST00000589116 CYP7A1P22680 504 aa14.35□□□□□ -0.11
CCBE1-203ENST00000589116 RPS6KB1P23443 525 aa14.35□□□□□ -0.11
CCBE1-203ENST00000589116 HTRA3P83110 453 aa14.35□□□□□ -0.11
CCBE1-203ENST00000589116 ANKRD1Q15327 319 aa14.35□□□□□ -0.11
CCBE1-203ENST00000589116 ALX1Q15699 326 aa14.35□□□□□ -0.11
CCBE1-203ENST00000589116 SLC51AQ86UW1 340 aa14.35□□□□□ -0.11
CCBE1-203ENST00000589116 CNKSR1Q969H4 720 aa14.35□□□□□ -0.11
CCBE1-203ENST00000589116 INTS4Q96HW7 963 aaKnown RBP14.35□□□□□ -0.11
CCBE1-203ENST00000589116 NEK1Q96PY6 1258 aa14.35□□□□□ -0.11
CCBE1-203ENST00000589116 CWC22Q9HCG8 908 aaKnown RBP14.35□□□□□ -0.11
CCBE1-203ENST00000589116 MBD4O95243 580 aa14.34□□□□□ -0.11
CCBE1-203ENST00000589116 FGAP02671 866 aa14.34□□□□□ -0.11
CCBE1-203ENST00000589116 NAA16Q6N069 864 aaPredicted RBP14.34□□□□□ -0.11
CCBE1-203ENST00000589116 ZSCAN31Q96LW9 406 aaPredicted RBP14.34□□□□□ -0.11
CCBE1-203ENST00000589116 POLLQ9UGP5 575 aa14.34□□□□□ -0.11
CCBE1-203ENST00000589116 LIMCH1Q9UPQ0 1083 aa14.34□□□□□ -0.11
CCBE1-203ENST00000589116 TAF6LQ9Y6J9 622 aa14.34□□□□□ -0.11
CCBE1-203ENST00000589116 KIF13BQ9NQT8 1826 aa14.34□□□□□ -0.11
CCBE1-203ENST00000589116 PATL2C9JE40 543 aaKnown RBP14.33□□□□□ -0.11
CCBE1-203ENST00000589116 CHAF1AQ13111 956 aaPredicted RBP14.33□□□□□ -0.11
CCBE1-203ENST00000589116 MPNDQ8N594 471 aa14.33□□□□□ -0.11
CCBE1-203ENST00000589116 ZNF622Q969S3 477 aaKnown RBP eCLIP14.33□□□□□ -0.11
CCBE1-203ENST00000589116 NSUN4Q96CB9 384 aaKnown RBP14.33□□□□□ -0.11
CCBE1-203ENST00000589116 CD209Q9NNX6 404 aa14.33□□□□□ -0.11
CCBE1-203ENST00000589116 SH2B1Q9NRF2 756 aaPredicted RBP14.33□□□□□ -0.11
CCBE1-203ENST00000589116 C6orf229H3BNL8 230 aa14.33□□□□□ -0.12
CCBE1-203ENST00000589116 CPA1P15085 419 aa14.33□□□□□ -0.12
CCBE1-203ENST00000589116 DPP8Q6V1X1 898 aaPredicted RBP14.33□□□□□ -0.12
CCBE1-203ENST00000589116 SLX4Q8IY92 1834 aa14.32□□□□□ -0.12
CCBE1-203ENST00000589116 TIAM2Q8IVF5 1701 aa14.32□□□□□ -0.12
CCBE1-203ENST00000589116 MAGEB6P1A0A0J9YX57 407 aa14.32□□□□□ -0.12
CCBE1-203ENST00000589116 E7EWF7 191 aa14.32□□□□□ -0.12
CCBE1-203ENST00000589116 ZNF213O14771 459 aa14.32□□□□□ -0.12
CCBE1-203ENST00000589116 TTLL5Q6EMB2 1281 aa14.32□□□□□ -0.12
CCBE1-203ENST00000589116 STOX1Q6ZVD7 989 aa14.32□□□□□ -0.12
CCBE1-203ENST00000589116 EYA3Q99504 573 aa14.32□□□□□ -0.12
CCBE1-203ENST00000589116 NACAP1Q9BZK3 213 aa14.32□□□□□ -0.12
CCBE1-203ENST00000589116 COA1Q9GZY4 146 aa14.32□□□□□ -0.12
CCBE1-203ENST00000589116 ARMT1Q9H993 441 aa14.32□□□□□ -0.12
CCBE1-203ENST00000589116 APPP05067 770 aa14.31□□□□□ -0.12
CCBE1-203ENST00000589116 PRDX5P30044 214 aa14.31□□□□□ -0.12
CCBE1-203ENST00000589116 MECOMQ03112 1051 aa14.31□□□□□ -0.12
CCBE1-203ENST00000589116 CC2D2BQ6DHV5 1058 aa14.31□□□□□ -0.12
CCBE1-203ENST00000589116 NOL8Q76FK4 1167 aaKnown RBP14.31□□□□□ -0.12
CCBE1-203ENST00000589116 DHX32Q7L7V1 743 aaKnown RBP14.31□□□□□ -0.12
CCBE1-203ENST00000589116 LCORLQ8N3X6 602 aa14.31□□□□□ -0.12
CCBE1-203ENST00000589116 RBM46Q8TBY0 533 aaKnown RBP14.31□□□□□ -0.12
CCBE1-203ENST00000589116 TBC1D22AQ8WUA7 517 aa14.31□□□□□ -0.12
CCBE1-203ENST00000589116 GPR101Q96P66 508 aaPredicted RBP14.31□□□□□ -0.12
CCBE1-203ENST00000589116 RIOK1Q9BRS2 568 aaKnown RBP14.31□□□□□ -0.12
CCBE1-203ENST00000589116 NAPBQ9H115 298 aa14.31□□□□□ -0.12
CCBE1-203ENST00000589116 FAM205AQ6ZU69 1335 aa14.31□□□□□ -0.12
CCBE1-203ENST00000589116 GSG1L2A8MUP6 293 aa14.3□□□□□ -0.12
CCBE1-203ENST00000589116 LDHBP07195 334 aaKnown RBP14.3□□□□□ -0.12
CCBE1-203ENST00000589116 GSTO1P78417 241 aa14.3□□□□□ -0.12
CCBE1-203ENST00000589116 ADGRA1Q86SQ6 560 aa14.3□□□□□ -0.12
CCBE1-203ENST00000589116 DZIP1Q86YF9 867 aaKnown RBP14.3□□□□□ -0.12
CCBE1-203ENST00000589116 IFNL3Q8IZI9 196 aa14.3□□□□□ -0.12
CCBE1-203ENST00000589116 MIGA1Q8NAN2 632 aa14.3□□□□□ -0.12
CCBE1-203ENST00000589116 ZNF384Q8TF68 577 aa14.3□□□□□ -0.12
CCBE1-203ENST00000589116 ZC3H12CQ9C0D7 883 aaKnown RBP14.3□□□□□ -0.12
CCBE1-203ENST00000589116 NMRK2Q9NPI5 230 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms