RNA–Protein interactions for RNA: ENST00000589064.5

MBD3-205, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 2

Gene MBD3, Length 1,475 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-205ENST00000589064 WDR66Q8TBY9 1149 aa25.71■■□□□ 1.71
MBD3-205ENST00000589064 C1orf115Q9H7X2 142 aa25.71■■□□□ 1.71
MBD3-205ENST00000589064 SLC10A3P09131 477 aa25.7■■□□□ 1.7
MBD3-205ENST00000589064 ATP8B2P98198 1209 aa25.7■■□□□ 1.7
MBD3-205ENST00000589064 HDLBPQ00341 1268 aaKnown RBP25.7■■□□□ 1.7
MBD3-205ENST00000589064 G3BP1Q13283 466 aaKnown RBP eCLIP25.7■■□□□ 1.7
MBD3-205ENST00000589064 PANK1Q8TE04 598 aa25.7■■□□□ 1.7
MBD3-205ENST00000589064 PRDM10Q9NQV6 1147 aa25.7■■□□□ 1.7
MBD3-205ENST00000589064 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP25.7■■□□□ 1.7
MBD3-205ENST00000589064 RASA3Q14644 834 aa25.69■■□□□ 1.7
MBD3-205ENST00000589064 SPDYE2Q495Y8 402 aa25.69■■□□□ 1.7
MBD3-205ENST00000589064 FZD1Q9UP38 647 aa25.69■■□□□ 1.7
MBD3-205ENST00000589064 AKAP2Q9Y2D5 859 aa25.69■■□□□ 1.7
MBD3-205ENST00000589064 SUGT1Q9Y2Z0 365 aa25.69■■□□□ 1.7
MBD3-205ENST00000589064 PPP2R3BQ9Y5P8 575 aa25.69■■□□□ 1.7
MBD3-205ENST00000589064 CCDC102BQ68D86 513 aa25.68■■□□□ 1.7
MBD3-205ENST00000589064 ARMC9Q7Z3E5 817 aa25.68■■□□□ 1.7
MBD3-205ENST00000589064 RASAL3Q86YV0 1011 aa25.68■■□□□ 1.7
MBD3-205ENST00000589064 TNS4Q8IZW8 715 aa25.68■■□□□ 1.7
MBD3-205ENST00000589064 TEKT1Q969V4 418 aa25.68■■□□□ 1.7
MBD3-205ENST00000589064 MRIQ9BWK5 157 aa25.68■■□□□ 1.7
MBD3-205ENST00000589064 TSKSQ9UJT2 592 aa25.68■■□□□ 1.7
MBD3-205ENST00000589064 A0A1B0GUL7 405 aa25.67■■□□□ 1.7
MBD3-205ENST00000589064 POLA2Q14181 598 aa25.67■■□□□ 1.7
MBD3-205ENST00000589064 NEUROD6Q96NK8 337 aa25.67■■□□□ 1.7
MBD3-205ENST00000589064 NBPF12Q5TAG4 269 aaPredicted RBP25.66■■□□□ 1.7
MBD3-205ENST00000589064 XAGE2Q96GT9 111 aa25.66■■□□□ 1.7
MBD3-205ENST00000589064 DENND2AQ9ULE3 1009 aa25.66■■□□□ 1.7
MBD3-205ENST00000589064 ANGEL1Q9UNK9 670 aaKnown RBP25.66■■□□□ 1.7
MBD3-205ENST00000589064 TCP10L2B9ZVM9 353 aa25.66■■□□□ 1.7
MBD3-205ENST00000589064 SUPT20HL1Q3ZLR7 823 aa25.66■■□□□ 1.7
MBD3-205ENST00000589064 SEMA3EO15041 775 aa25.65■■□□□ 1.7
MBD3-205ENST00000589064 TNFAIP1Q13829 316 aa25.65■■□□□ 1.7
MBD3-205ENST00000589064 SSH3Q8TE77 659 aa25.65■■□□□ 1.7
MBD3-205ENST00000589064 ZDHHC15Q96MV8 337 aa25.65■■□□□ 1.7
MBD3-205ENST00000589064 CSRNP1Q96S65 589 aa25.65■■□□□ 1.7
MBD3-205ENST00000589064 MAST3O60307 1309 aa25.64■■□□□ 1.7
MBD3-205ENST00000589064 LDLRAD1Q5T700 205 aa25.64■■□□□ 1.69
MBD3-205ENST00000589064 APOBEC3HQ6NTF7 200 aaKnown RBP25.64■■□□□ 1.69
MBD3-205ENST00000589064 RCAN3Q9UKA8 241 aa25.64■■□□□ 1.69
MBD3-205ENST00000589064 COL1A1P02452 1464 aaPredicted RBP25.64■■□□□ 1.69
MBD3-205ENST00000589064 THSD7BQ9C0I4 1608 aa25.63■■□□□ 1.69
MBD3-205ENST00000589064 CA12O43570 354 aa25.63■■□□□ 1.69
MBD3-205ENST00000589064 PRDX5P30044 214 aa25.63■■□□□ 1.69
MBD3-205ENST00000589064 CACNB3P54284 484 aa25.63■■□□□ 1.69
MBD3-205ENST00000589064 HHIPL2Q6UWX4 724 aa25.63■■□□□ 1.69
MBD3-205ENST00000589064 ZBTB4Q9P1Z0 1013 aaPredicted RBP25.63■■□□□ 1.69
MBD3-205ENST00000589064 PAPPA2Q9BXP8 1791 aa25.63■■□□□ 1.69
MBD3-205ENST00000589064 PPP1R12BO60237 982 aaPredicted RBP25.62■■□□□ 1.69
MBD3-205ENST00000589064 SURF6O75683 361 aaKnown RBP25.62■■□□□ 1.69
MBD3-205ENST00000589064 MS4A1P11836 297 aa25.62■■□□□ 1.69
MBD3-205ENST00000589064 MVPQ14764 893 aaKnown RBP25.62■■□□□ 1.69
MBD3-205ENST00000589064 LDHBP07195 334 aaKnown RBP25.61■■□□□ 1.69
MBD3-205ENST00000589064 OS9Q13438 667 aaPredicted RBP25.61■■□□□ 1.69
MBD3-205ENST00000589064 RASGRF1Q13972 1273 aa25.61■■□□□ 1.69
MBD3-205ENST00000589064 TMEM39BQ9GZU3 492 aa25.61■■□□□ 1.69
MBD3-205ENST00000589064 TNNI2P48788 182 aa25.6■■□□□ 1.69
MBD3-205ENST00000589064 DIXDC1Q155Q3 683 aa25.6■■□□□ 1.69
MBD3-205ENST00000589064 MAP3K11Q16584 847 aa25.6■■□□□ 1.69
MBD3-205ENST00000589064 GORABQ5T7V8 394 aa25.6■■□□□ 1.69
MBD3-205ENST00000589064 SALL1Q9NSC2 1324 aa25.6■■□□□ 1.69
MBD3-205ENST00000589064 ZBTB22O15209 634 aa25.6■■□□□ 1.69
MBD3-205ENST00000589064 USP2O75604 605 aaPredicted RBP25.6■■□□□ 1.69
MBD3-205ENST00000589064 MKRN3Q13064 507 aaKnown RBP25.6■■□□□ 1.69
MBD3-205ENST00000589064 CDAN1Q8IWY9 1227 aa25.6■■□□□ 1.69
MBD3-205ENST00000589064 SLC10A4Q96EP9 437 aa25.6■■□□□ 1.69
MBD3-205ENST00000589064 TEPSINQ96N21 525 aa25.6■■□□□ 1.69
MBD3-205ENST00000589064 RNF186Q9NXI6 227 aa25.59■■□□□ 1.69
MBD3-205ENST00000589064 TMOD2Q9NZR1 351 aa25.59■■□□□ 1.69
MBD3-205ENST00000589064 DAGLAQ9Y4D2 1042 aa25.59■■□□□ 1.69
MBD3-205ENST00000589064 SSC5DA1L4H1 1573 aa25.58■■□□□ 1.69
MBD3-205ENST00000589064 CEP85Q6P2H3 762 aa25.58■■□□□ 1.69
MBD3-205ENST00000589064 ABCF2Q9UG63 623 aa25.58■■□□□ 1.69
MBD3-205ENST00000589064 COG6Q9Y2V7 657 aa25.58■■□□□ 1.69
MBD3-205ENST00000589064 NOP58Q9Y2X3 529 aaKnown RBP25.58■■□□□ 1.69
MBD3-205ENST00000589064 TRPA1O75762 1119 aa25.57■■□□□ 1.68
MBD3-205ENST00000589064 REM2Q8IYK8 340 aaPredicted RBP25.57■■□□□ 1.68
MBD3-205ENST00000589064 ZGPATQ8N5A5 531 aaKnown RBP25.57■■□□□ 1.68
MBD3-205ENST00000589064 CLMNQ96JQ2 1002 aa25.57■■□□□ 1.68
MBD3-205ENST00000589064 IREB2P48200 963 aaKnown RBP25.56■■□□□ 1.68
MBD3-205ENST00000589064 GPR108Q9NPR9 543 aa25.56■■□□□ 1.68
MBD3-205ENST00000589064 HMG20BQ9P0W2 317 aa25.56■■□□□ 1.68
MBD3-205ENST00000589064 TNNI3KQ59H18 835 aa25.55■■□□□ 1.68
MBD3-205ENST00000589064 FKBP1CQ5VVH2 108 aa25.55■■□□□ 1.68
MBD3-205ENST00000589064 SPRYD7Q5W111 196 aa25.55■■□□□ 1.68
MBD3-205ENST00000589064 FPGT-TNNI3KV9GXZ4 949 aa25.55■■□□□ 1.68
MBD3-205ENST00000589064 PDS5AQ29RF7 1337 aaKnown RBP25.54■■□□□ 1.68
MBD3-205ENST00000589064 CDC42EP5Q6NZY7 148 aa25.54■■□□□ 1.68
MBD3-205ENST00000589064 SPTY2D1Q68D10 685 aaPredicted RBP25.53■■□□□ 1.68
MBD3-205ENST00000589064 PI16Q6UXB8 463 aa25.53■■□□□ 1.68
MBD3-205ENST00000589064 FAM83AQ86UY5 434 aa25.53■■□□□ 1.68
MBD3-205ENST00000589064 SPATA5Q8NB90 893 aa25.53■■□□□ 1.68
MBD3-205ENST00000589064 USP40Q9NVE5 1235 aa25.53■■□□□ 1.68
MBD3-205ENST00000589064 SAGE1Q9NXZ1 904 aa25.53■■□□□ 1.68
MBD3-205ENST00000589064 UNCXA6NJT0 531 aa25.53■■□□□ 1.68
MBD3-205ENST00000589064 ARID4AP29374 1257 aaPredicted RBP25.53■■□□□ 1.68
MBD3-205ENST00000589064 DBNDD2Q9BQY9 259 aa25.53■■□□□ 1.68
MBD3-205ENST00000589064 DDX19BQ9UMR2 479 aa25.53■■□□□ 1.68
MBD3-205ENST00000589064 ARAP2Q8WZ64 1704 aa25.52■■□□□ 1.68
MBD3-205ENST00000589064 TM4SF4P48230 202 aa25.52■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 103.9 ms