RNA–Protein interactions for RNA: ENST00000588542.5

DDX39A-207, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 1,297 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-207ENST00000588542 TRAF5O00463 557 aa24.79■■□□□ 1.56
DDX39A-207ENST00000588542 SMARCA5O60264 1052 aaPredicted RBP24.79■■□□□ 1.56
DDX39A-207ENST00000588542 PRDX5P30044 214 aa24.79■■□□□ 1.56
DDX39A-207ENST00000588542 AOX1Q06278 1338 aa24.79■■□□□ 1.56
DDX39A-207ENST00000588542 SPDYE2BA6NHP3 402 aa24.78■■□□□ 1.56
DDX39A-207ENST00000588542 SPDYE6P0CI01 402 aa24.78■■□□□ 1.56
DDX39A-207ENST00000588542 CRKP46108 304 aa24.78■■□□□ 1.56
DDX39A-207ENST00000588542 HDLBPQ00341 1268 aaKnown RBP24.78■■□□□ 1.56
DDX39A-207ENST00000588542 HDAC1Q13547 482 aaPredicted RBP24.78■■□□□ 1.56
DDX39A-207ENST00000588542 CDC37L1Q7L3B6 337 aa24.78■■□□□ 1.56
DDX39A-207ENST00000588542 DCPSQ96C86 337 aaKnown RBP24.78■■□□□ 1.56
DDX39A-207ENST00000588542 PRMT6Q96LA8 375 aaPredicted RBP24.78■■□□□ 1.56
DDX39A-207ENST00000588542 PITPNM2Q9BZ72 1349 aa24.78■■□□□ 1.56
DDX39A-207ENST00000588542 APLP1P51693 650 aa24.77■■□□□ 1.56
DDX39A-207ENST00000588542 DLK2Q6UY11 383 aa24.77■■□□□ 1.56
DDX39A-207ENST00000588542 USP48Q86UV5 1035 aa24.77■■□□□ 1.56
DDX39A-207ENST00000588542 MRIQ9BWK5 157 aa24.77■■□□□ 1.56
DDX39A-207ENST00000588542 LDHBP07195 334 aaKnown RBP24.76■■□□□ 1.55
DDX39A-207ENST00000588542 RBM5P52756 815 aaKnown RBP eCLIP24.76■■□□□ 1.554e-7■□□□□ 8.1
DDX39A-207ENST00000588542 KRT26Q7Z3Y9 468 aa24.76■■□□□ 1.55
DDX39A-207ENST00000588542 ZGPATQ8N5A5 531 aaKnown RBP24.76■■□□□ 1.55
DDX39A-207ENST00000588542 SNRKQ9NRH2 765 aa24.76■■□□□ 1.55
DDX39A-207ENST00000588542 MAST3O60307 1309 aa24.76■■□□□ 1.55
DDX39A-207ENST00000588542 CEP350Q5VT06 3117 aa24.76■■□□□ 1.55
DDX39A-207ENST00000588542 DOCK2Q92608 1830 aa24.75■■□□□ 1.55
DDX39A-207ENST00000588542 ADM5C9JUS6 153 aa24.75■■□□□ 1.55
DDX39A-207ENST00000588542 IFIT2P09913 472 aaKnown RBP24.75■■□□□ 1.55
DDX39A-207ENST00000588542 BCL11AQ9H165 835 aa24.75■■□□□ 1.55
DDX39A-207ENST00000588542 ABCF2Q9UG63 623 aa24.75■■□□□ 1.55
DDX39A-207ENST00000588542 SCAF8Q9UPN6 1271 aaKnown RBP24.75■■□□□ 1.55
DDX39A-207ENST00000588542 TBC1D9Q6ZT07 1266 aa24.74■■□□□ 1.55
DDX39A-207ENST00000588542 TEKT1Q969V4 418 aa24.74■■□□□ 1.55
DDX39A-207ENST00000588542 MAST2Q6P0Q8 1798 aa24.74■■□□□ 1.55
DDX39A-207ENST00000588542 ZAP70P43403 619 aa24.73■■□□□ 1.55
DDX39A-207ENST00000588542 DIXDC1Q155Q3 683 aa24.73■■□□□ 1.55
DDX39A-207ENST00000588542 HHIPL2Q6UWX4 724 aa24.73■■□□□ 1.55
DDX39A-207ENST00000588542 SULF1Q8IWU6 871 aa24.73■■□□□ 1.55
DDX39A-207ENST00000588542 ZDHHC15Q96MV8 337 aa24.73■■□□□ 1.55
DDX39A-207ENST00000588542 CYP2E1P05181 493 aaPredicted RBP24.72■■□□□ 1.55
DDX39A-207ENST00000588542 HTRA3P83110 453 aa24.72■■□□□ 1.55
DDX39A-207ENST00000588542 CST9Q5W186 159 aa24.72■■□□□ 1.55
DDX39A-207ENST00000588542 SPTY2D1Q68D10 685 aaPredicted RBP24.72■■□□□ 1.55
DDX39A-207ENST00000588542 ZNF384Q8TF68 577 aa24.72■■□□□ 1.55
DDX39A-207ENST00000588542 CLRN2A0PK11 232 aa24.71■■□□□ 1.55
DDX39A-207ENST00000588542 APOBEC3HQ6NTF7 200 aaKnown RBP24.71■■□□□ 1.55
DDX39A-207ENST00000588542 ERICH6Q7L0X2 663 aa24.71■■□□□ 1.55
DDX39A-207ENST00000588542 TDRD3Q9H7E2 651 aaKnown RBP24.71■■□□□ 1.55
DDX39A-207ENST00000588542 IGHDP01880 384 aa24.7■■□□□ 1.54
DDX39A-207ENST00000588542 SPDYE2Q495Y8 402 aa24.7■■□□□ 1.54
DDX39A-207ENST00000588542 APOBEC3FQ8IUX4 373 aaKnown RBP24.7■■□□□ 1.54
DDX39A-207ENST00000588542 GCC1Q96CN9 775 aa24.7■■□□□ 1.54
DDX39A-207ENST00000588542 ZNF70Q9UC06 446 aaPredicted RBP24.7■■□□□ 1.54
DDX39A-207ENST00000588542 DAGLAQ9Y4D2 1042 aa24.7■■□□□ 1.54
DDX39A-207ENST00000588542 NDUFB9Q9Y6M9 179 aa24.7■■□□□ 1.54
DDX39A-207ENST00000588542 TMEM88BA6NKF7 163 aa24.69■■□□□ 1.54
DDX39A-207ENST00000588542 MYO1BO43795 1136 aa24.69■■□□□ 1.54
DDX39A-207ENST00000588542 MECOMQ03112 1051 aa24.69■■□□□ 1.54
DDX39A-207ENST00000588542 PPIL4Q8WUA2 492 aaKnown RBP eCLIP24.69■■□□□ 1.54
DDX39A-207ENST00000588542 RWDD1Q9H446 243 aaPredicted RBP24.69■■□□□ 1.54
DDX39A-207ENST00000588542 CREBZFQ9NS37 354 aa24.69■■□□□ 1.54
DDX39A-207ENST00000588542 DZIP1Q86YF9 867 aaKnown RBP24.68■■□□□ 1.54
DDX39A-207ENST00000588542 NSUN4Q96CB9 384 aaKnown RBP24.68■■□□□ 1.54
DDX39A-207ENST00000588542 CDCA5Q96FF9 252 aa24.68■■□□□ 1.54
DDX39A-207ENST00000588542 PIH1D3Q9NQM4 214 aaKnown RBP24.68■■□□□ 1.54
DDX39A-207ENST00000588542 GAKO14976 1311 aa24.67■■□□□ 1.54
DDX39A-207ENST00000588542 CELF2O95319 508 aaKnown RBP24.67■■□□□ 1.54
DDX39A-207ENST00000588542 FAM163AQ96GL9 167 aaPredicted RBP24.67■■□□□ 1.54
DDX39A-207ENST00000588542 VEZTQ9HBM0 779 aa24.67■■□□□ 1.54
DDX39A-207ENST00000588542 LRP2BPQ9P2M1 347 aa24.67■■□□□ 1.54
DDX39A-207ENST00000588542 ATP5JP18859 108 aa24.66■■□□□ 1.54
DDX39A-207ENST00000588542 PRAMEF18Q5VWM3 479 aa24.66■■□□□ 1.54
DDX39A-207ENST00000588542 SMC5Q8IY18 1101 aa24.66■■□□□ 1.54
DDX39A-207ENST00000588542 ANTXR1Q9H6X2 564 aa24.66■■□□□ 1.54
DDX39A-207ENST00000588542 RAI14Q9P0K7 980 aa24.66■■□□□ 1.54
DDX39A-207ENST00000588542 ANKRD45Q5TZF3 282 aa24.65■■□□□ 1.54
DDX39A-207ENST00000588542 DEFB129Q9H1M3 183 aa24.65■■□□□ 1.54
DDX39A-207ENST00000588542 ZNF408Q9H9D4 720 aa24.65■■□□□ 1.54
DDX39A-207ENST00000588542 MYH7P12883 1935 aa24.65■■□□□ 1.54
DDX39A-207ENST00000588542 MROH7-TTC4A0A0A0MT08 1334 aa24.64■■□□□ 1.54
DDX39A-207ENST00000588542 SLF2Q8IX21 1173 aa24.64■■□□□ 1.54
DDX39A-207ENST00000588542 CDK5RAP2Q96SN8 1893 aa24.64■■□□□ 1.53
DDX39A-207ENST00000588542 CACNB3P54284 484 aa24.63■■□□□ 1.53
DDX39A-207ENST00000588542 CDC42EP5Q6NZY7 148 aa24.63■■□□□ 1.53
DDX39A-207ENST00000588542 DNAJC5GQ8N7S2 189 aa24.63■■□□□ 1.53
DDX39A-207ENST00000588542 OTUD7AQ8TE49 926 aaPredicted RBP24.63■■□□□ 1.53
DDX39A-207ENST00000588542 BOLA2Q9H3K6 86 aa24.63■■□□□ 1.53
DDX39A-207ENST00000588542 ECHDC1Q9NTX5 307 aa24.63■■□□□ 1.53
DDX39A-207ENST00000588542 TCP10L2B9ZVM9 353 aa24.62■■□□□ 1.53
DDX39A-207ENST00000588542 GSTO1P78417 241 aa24.62■■□□□ 1.53
DDX39A-207ENST00000588542 RASA3Q14644 834 aa24.62■■□□□ 1.53
DDX39A-207ENST00000588542 HAUS7Q99871 368 aa24.62■■□□□ 1.53
DDX39A-207ENST00000588542 PPP2R3BQ9Y5P8 575 aa24.62■■□□□ 1.53
DDX39A-207ENST00000588542 CNTNAP1P78357 1384 aa24.62■■□□□ 1.53
DDX39A-207ENST00000588542 SALL3Q9BXA9 1300 aa24.61■■□□□ 1.53
DDX39A-207ENST00000588542 GPR75-ASB3A0A0A6YYF3 556 aa24.61■■□□□ 1.53
DDX39A-207ENST00000588542 IGSF3O75054 1194 aa24.61■■□□□ 1.53
DDX39A-207ENST00000588542 FKBP1CQ5VVH2 108 aa24.61■■□□□ 1.53
DDX39A-207ENST00000588542 EDC3Q96F86 508 aaKnown RBP24.61■■□□□ 1.53
DDX39A-207ENST00000588542 DNAJC2Q99543 621 aaKnown RBP24.61■■□□□ 1.53
DDX39A-207ENST00000588542 PAPPA2Q9BXP8 1791 aa24.61■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 94.8 ms