RNA–Protein interactions for RNA: ENST00000588472.6

SDF2-207, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 681 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-207ENST00000588472 G3BP1Q13283 466 aaKnown RBP eCLIP10.97□□□□□ -0.65
SDF2-207ENST00000588472 OS9Q13438 667 aaPredicted RBP10.97□□□□□ -0.65
SDF2-207ENST00000588472 APOBEC3FQ8IUX4 373 aaKnown RBP10.97□□□□□ -0.65
SDF2-207ENST00000588472 YTHDC1Q96MU7 727 aaKnown RBP10.97□□□□□ -0.65
SDF2-207ENST00000588472 TDRD3Q9H7E2 651 aaKnown RBP10.97□□□□□ -0.65
SDF2-207ENST00000588472 FBXO3Q9UK99 471 aa10.97□□□□□ -0.65
SDF2-207ENST00000588472 AOX1Q06278 1338 aa10.97□□□□□ -0.65
SDF2-207ENST00000588472 ZBTB7BO15156 539 aaPredicted RBP10.96□□□□□ -0.65
SDF2-207ENST00000588472 NF2P35240 595 aa10.96□□□□□ -0.65
SDF2-207ENST00000588472 PHKA1P46020 1223 aa10.96□□□□□ -0.65
SDF2-207ENST00000588472 RGMBQ6NW40 437 aa10.96□□□□□ -0.65
SDF2-207ENST00000588472 MTMR14Q8NCE2 650 aa10.96□□□□□ -0.65
SDF2-207ENST00000588472 TBC1D22AQ8WUA7 517 aa10.96□□□□□ -0.65
SDF2-207ENST00000588472 ZBED3Q96IU2 234 aaPredicted RBP10.96□□□□□ -0.65
SDF2-207ENST00000588472 DEFB129Q9H1M3 183 aa10.96□□□□□ -0.65
SDF2-207ENST00000588472 GNL3LQ9NVN8 582 aaKnown RBP10.96□□□□□ -0.65
SDF2-207ENST00000588472 RCAN3Q9UKA8 241 aa10.96□□□□□ -0.65
SDF2-207ENST00000588472 FZD1Q9UP38 647 aa10.96□□□□□ -0.65
SDF2-207ENST00000588472 A0A1B0GUL7 405 aa10.95□□□□□ -0.66
SDF2-207ENST00000588472 TCP10L2B9ZVM9 353 aa10.95□□□□□ -0.66
SDF2-207ENST00000588472 NOGQ13253 232 aa10.95□□□□□ -0.66
SDF2-207ENST00000588472 MTX1Q13505 466 aa10.95□□□□□ -0.66
SDF2-207ENST00000588472 GORABQ5T7V8 394 aa10.95□□□□□ -0.66
SDF2-207ENST00000588472 ZIC5Q96T25 663 aa10.95□□□□□ -0.66
SDF2-207ENST00000588472 BCL11AQ9H165 835 aa10.95□□□□□ -0.66
SDF2-207ENST00000588472 SERPINA10Q9UK55 444 aa10.95□□□□□ -0.66
SDF2-207ENST00000588472 AKAP2Q9Y2D5 859 aa10.95□□□□□ -0.66
SDF2-207ENST00000588472 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.95□□□□□ -0.66
SDF2-207ENST00000588472 SURF6O75683 361 aaKnown RBP10.94□□□□□ -0.66
SDF2-207ENST00000588472 CACNB3P54284 484 aa10.94□□□□□ -0.66
SDF2-207ENST00000588472 ATP8B2P98198 1209 aa10.94□□□□□ -0.66
SDF2-207ENST00000588472 MKRN3Q13064 507 aaKnown RBP10.94□□□□□ -0.66
SDF2-207ENST00000588472 RASA3Q14644 834 aa10.94□□□□□ -0.66
SDF2-207ENST00000588472 CCDC102BQ68D86 513 aa10.94□□□□□ -0.66
SDF2-207ENST00000588472 WDR66Q8TBY9 1149 aa10.94□□□□□ -0.66
SDF2-207ENST00000588472 TEKT1Q969V4 418 aa10.94□□□□□ -0.66
SDF2-207ENST00000588472 CCDC102AQ96A19 550 aa10.94□□□□□ -0.66
SDF2-207ENST00000588472 XAGE2Q96GT9 111 aa10.94□□□□□ -0.66
SDF2-207ENST00000588472 ZNF70Q9UC06 446 aaPredicted RBP10.94□□□□□ -0.66
SDF2-207ENST00000588472 ANGEL1Q9UNK9 670 aaKnown RBP10.94□□□□□ -0.66
SDF2-207ENST00000588472 COG6Q9Y2V7 657 aa10.94□□□□□ -0.66
SDF2-207ENST00000588472 MS4A1P11836 297 aa10.93□□□□□ -0.66
SDF2-207ENST00000588472 KIF23Q02241 960 aaPredicted RBP10.93□□□□□ -0.66
SDF2-207ENST00000588472 NBPF12Q5TAG4 269 aaPredicted RBP10.93□□□□□ -0.66
SDF2-207ENST00000588472 ARMC9Q7Z3E5 817 aa10.93□□□□□ -0.66
SDF2-207ENST00000588472 DENND2AQ9ULE3 1009 aa10.93□□□□□ -0.66
SDF2-207ENST00000588472 FAM155AB1AL88 458 aaPredicted RBP10.92□□□□□ -0.66
SDF2-207ENST00000588472 LDHBP07195 334 aaKnown RBP10.92□□□□□ -0.66
SDF2-207ENST00000588472 PRDX5P30044 214 aa10.92□□□□□ -0.66
SDF2-207ENST00000588472 SOX10P56693 466 aa10.92□□□□□ -0.66
SDF2-207ENST00000588472 FKBP1BP68106 108 aa10.92□□□□□ -0.66
SDF2-207ENST00000588472 MVPQ14764 893 aaKnown RBP10.92□□□□□ -0.66
SDF2-207ENST00000588472 DIXDC1Q155Q3 683 aa10.92□□□□□ -0.66
SDF2-207ENST00000588472 SPDYE2Q495Y8 402 aa10.92□□□□□ -0.66
SDF2-207ENST00000588472 ABCF2Q9UG63 623 aa10.92□□□□□ -0.66
SDF2-207ENST00000588472 COL1A1P02452 1464 aaPredicted RBP10.92□□□□□ -0.66
SDF2-207ENST00000588472 MAST3O60307 1309 aa10.91□□□□□ -0.66
SDF2-207ENST00000588472 APBB1O00213 710 aa10.91□□□□□ -0.66
SDF2-207ENST00000588472 PPP1R12BO60237 982 aaPredicted RBP10.91□□□□□ -0.66
SDF2-207ENST00000588472 TNNI2P48788 182 aa10.91□□□□□ -0.66
SDF2-207ENST00000588472 RASGRF1Q13972 1273 aa10.91□□□□□ -0.66
SDF2-207ENST00000588472 POLA2Q14181 598 aa10.91□□□□□ -0.66
SDF2-207ENST00000588472 SUPT20HL1Q3ZLR7 823 aa10.91□□□□□ -0.66
SDF2-207ENST00000588472 RASAL3Q86YV0 1011 aa10.91□□□□□ -0.66
SDF2-207ENST00000588472 SSH3Q8TE77 659 aa10.91□□□□□ -0.66
SDF2-207ENST00000588472 TMEM39BQ9GZU3 492 aa10.91□□□□□ -0.66
SDF2-207ENST00000588472 SAGE1Q9NXZ1 904 aa10.91□□□□□ -0.66
SDF2-207ENST00000588472 TMOD2Q9NZR1 351 aa10.91□□□□□ -0.66
SDF2-207ENST00000588472 SUGT1Q9Y2Z0 365 aa10.91□□□□□ -0.66
SDF2-207ENST00000588472 PAPPA2Q9BXP8 1791 aa10.9□□□□□ -0.66
SDF2-207ENST00000588472 MYH13Q9UKX3 1938 aa10.9□□□□□ -0.66
SDF2-207ENST00000588472 SEMA3EO15041 775 aa10.9□□□□□ -0.66
SDF2-207ENST00000588472 SLC10A3P09131 477 aa10.9□□□□□ -0.66
SDF2-207ENST00000588472 HDLBPQ00341 1268 aaKnown RBP10.9□□□□□ -0.66
SDF2-207ENST00000588472 TNFAIP1Q13829 316 aa10.9□□□□□ -0.66
SDF2-207ENST00000588472 C20orf194Q5TEA3 1177 aa10.9□□□□□ -0.66
SDF2-207ENST00000588472 PRPF38BQ5VTL8 546 aaKnown RBP10.9□□□□□ -0.66
SDF2-207ENST00000588472 APOBEC3HQ6NTF7 200 aaKnown RBP10.9□□□□□ -0.66
SDF2-207ENST00000588472 CEP85Q6P2H3 762 aa10.9□□□□□ -0.66
SDF2-207ENST00000588472 PI16Q6UXB8 463 aa10.9□□□□□ -0.66
SDF2-207ENST00000588472 TBC1D9Q6ZT07 1266 aa10.9□□□□□ -0.66
SDF2-207ENST00000588472 DZIP1Q86YF9 867 aaKnown RBP10.9□□□□□ -0.66
SDF2-207ENST00000588472 CDAN1Q8IWY9 1227 aa10.9□□□□□ -0.66
SDF2-207ENST00000588472 SLC10A4Q96EP9 437 aa10.9□□□□□ -0.66
SDF2-207ENST00000588472 ZDHHC15Q96MV8 337 aa10.9□□□□□ -0.66
SDF2-207ENST00000588472 EXOC6BQ9Y2D4 811 aa10.9□□□□□ -0.66
SDF2-207ENST00000588472 PPP2R3BQ9Y5P8 575 aa10.9□□□□□ -0.66
SDF2-207ENST00000588472 TCP10Q12799 353 aa10.89□□□□□ -0.67
SDF2-207ENST00000588472 TNNI3KQ59H18 835 aa10.89□□□□□ -0.67
SDF2-207ENST00000588472 TTC39AQ5SRH9 613 aa10.89□□□□□ -0.67
SDF2-207ENST00000588472 HHIPL2Q6UWX4 724 aa10.89□□□□□ -0.67
SDF2-207ENST00000588472 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.89□□□□□ -0.67
SDF2-207ENST00000588472 CLMNQ96JQ2 1002 aa10.89□□□□□ -0.67
SDF2-207ENST00000588472 CSRNP1Q96S65 589 aa10.89□□□□□ -0.67
SDF2-207ENST00000588472 DBNDD2Q9BQY9 259 aa10.89□□□□□ -0.67
SDF2-207ENST00000588472 CCDC8Q9H0W5 538 aaPredicted RBP10.89□□□□□ -0.67
SDF2-207ENST00000588472 SNRKQ9NRH2 765 aa10.89□□□□□ -0.67
SDF2-207ENST00000588472 USP40Q9NVE5 1235 aa10.89□□□□□ -0.67
SDF2-207ENST00000588472 HMG20BQ9P0W2 317 aa10.89□□□□□ -0.67
SDF2-207ENST00000588472 DDX19BQ9UMR2 479 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms