RNA–Protein interactions for RNA: ENST00000588410.1

TPM4-208, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-208ENST00000588410 AKAP2Q9Y2D5 859 aa24.24■■□□□ 1.47
TPM4-208ENST00000588410 SUGT1Q9Y2Z0 365 aa24.24■■□□□ 1.47
TPM4-208ENST00000588410 MAST3O60307 1309 aa24.24■■□□□ 1.47
TPM4-208ENST00000588410 COL1A1P02452 1464 aaPredicted RBP24.24■■□□□ 1.47
TPM4-208ENST00000588410 SUPT20HL1Q3ZLR7 823 aa24.23■■□□□ 1.47
TPM4-208ENST00000588410 TDRD3Q9H7E2 651 aaKnown RBP24.23■■□□□ 1.47
TPM4-208ENST00000588410 THSD7BQ9C0I4 1608 aa24.22■■□□□ 1.47
TPM4-208ENST00000588410 TFCP2Q12800 502 aa24.22■■□□□ 1.47
TPM4-208ENST00000588410 G3BP1Q13283 466 aaKnown RBP eCLIP24.22■■□□□ 1.476e-7■□□□□ 9.5
TPM4-208ENST00000588410 SPDYE2Q495Y8 402 aa24.22■■□□□ 1.47
TPM4-208ENST00000588410 RASAL3Q86YV0 1011 aa24.22■■□□□ 1.47
TPM4-208ENST00000588410 AOX1Q06278 1338 aa24.21■■□□□ 1.47
TPM4-208ENST00000588410 PNMA6EA0A0J9YXQ4 647 aa24.21■■□□□ 1.47
TPM4-208ENST00000588410 RASA3Q14644 834 aa24.21■■□□□ 1.47
TPM4-208ENST00000588410 DENND2AQ9ULE3 1009 aa24.21■■□□□ 1.47
TPM4-208ENST00000588410 ANGEL1Q9UNK9 670 aaKnown RBP24.21■■□□□ 1.47
TPM4-208ENST00000588410 PAPPA2Q9BXP8 1791 aa24.21■■□□□ 1.47
TPM4-208ENST00000588410 SEMA3EO15041 775 aa24.2■■□□□ 1.46
TPM4-208ENST00000588410 PPP1R12BO60237 982 aaPredicted RBP24.2■■□□□ 1.46
TPM4-208ENST00000588410 PHKA1P46020 1223 aa24.2■■□□□ 1.46
TPM4-208ENST00000588410 TIMM10P62072 90 aa24.2■■□□□ 1.46
TPM4-208ENST00000588410 MRIQ9BWK5 157 aa24.2■■□□□ 1.46
TPM4-208ENST00000588410 TSKSQ9UJT2 592 aa24.2■■□□□ 1.46
TPM4-208ENST00000588410 A0A1B0GUL7 405 aa24.19■■□□□ 1.46
TPM4-208ENST00000588410 MS4A1P11836 297 aa24.19■■□□□ 1.46
TPM4-208ENST00000588410 RLBP1P12271 317 aa24.19■■□□□ 1.46
TPM4-208ENST00000588410 ADORA1P30542 326 aa24.19■■□□□ 1.46
TPM4-208ENST00000588410 TNNI2P48788 182 aa24.19■■□□□ 1.46
TPM4-208ENST00000588410 CCDC102BQ68D86 513 aa24.19■■□□□ 1.46
TPM4-208ENST00000588410 REM2Q8IYK8 340 aaPredicted RBP24.19■■□□□ 1.46
TPM4-208ENST00000588410 TMOD2Q9NZR1 351 aa24.19■■□□□ 1.46
TPM4-208ENST00000588410 POLR2AP24928 1970 aaKnown RBP24.18■■□□□ 1.46
TPM4-208ENST00000588410 TCP10L2B9ZVM9 353 aa24.18■■□□□ 1.46
TPM4-208ENST00000588410 MVPQ14764 893 aaKnown RBP24.18■■□□□ 1.46
TPM4-208ENST00000588410 NEUROD6Q96NK8 337 aa24.18■■□□□ 1.46
TPM4-208ENST00000588410 C1orf115Q9H7X2 142 aa24.18■■□□□ 1.46
TPM4-208ENST00000588410 ZBTB7BO15156 539 aaPredicted RBP24.17■■□□□ 1.46
TPM4-208ENST00000588410 ATP8B2P98198 1209 aa24.17■■□□□ 1.46
TPM4-208ENST00000588410 OS9Q13438 667 aaPredicted RBP24.17■■□□□ 1.46
TPM4-208ENST00000588410 GORABQ5T7V8 394 aa24.17■■□□□ 1.46
TPM4-208ENST00000588410 NBPF12Q5TAG4 269 aaPredicted RBP24.17■■□□□ 1.46
TPM4-208ENST00000588410 HHIPL2Q6UWX4 724 aa24.17■■□□□ 1.46
TPM4-208ENST00000588410 ZDHHC15Q96MV8 337 aa24.17■■□□□ 1.46
TPM4-208ENST00000588410 LDHBP07195 334 aaKnown RBP24.16■■□□□ 1.46
TPM4-208ENST00000588410 PANK1Q8TE04 598 aa24.16■■□□□ 1.46
TPM4-208ENST00000588410 XAGE2Q96GT9 111 aa24.16■■□□□ 1.46
TPM4-208ENST00000588410 CSRNP1Q96S65 589 aa24.16■■□□□ 1.46
TPM4-208ENST00000588410 IREB2P48200 963 aaKnown RBP24.15■■□□□ 1.46
TPM4-208ENST00000588410 POLA2Q14181 598 aa24.15■■□□□ 1.46
TPM4-208ENST00000588410 LDLRAD1Q5T700 205 aa24.15■■□□□ 1.46
TPM4-208ENST00000588410 ZGPATQ8N5A5 531 aaKnown RBP24.15■■□□□ 1.46
TPM4-208ENST00000588410 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.15■■□□□ 1.46
TPM4-208ENST00000588410 FZD1Q9UP38 647 aa24.15■■□□□ 1.46
TPM4-208ENST00000588410 SSH3Q8TE77 659 aa24.14■■□□□ 1.45
TPM4-208ENST00000588410 SLC10A4Q96EP9 437 aa24.14■■□□□ 1.45
TPM4-208ENST00000588410 SAGE1Q9NXZ1 904 aa24.14■■□□□ 1.45
TPM4-208ENST00000588410 SALL1Q9NSC2 1324 aa24.13■■□□□ 1.45
TPM4-208ENST00000588410 PRDX5P30044 214 aa24.13■■□□□ 1.45
TPM4-208ENST00000588410 MKRN3Q13064 507 aaKnown RBP24.13■■□□□ 1.45
TPM4-208ENST00000588410 MAP3K11Q16584 847 aa24.13■■□□□ 1.45
TPM4-208ENST00000588410 APOBEC3HQ6NTF7 200 aaKnown RBP24.13■■□□□ 1.45
TPM4-208ENST00000588410 ZBTB22O15209 634 aa24.12■■□□□ 1.45
TPM4-208ENST00000588410 SURF6O75683 361 aaKnown RBP24.12■■□□□ 1.45
TPM4-208ENST00000588410 TRPA1O75762 1119 aa24.12■■□□□ 1.45
TPM4-208ENST00000588410 CACNB3P54284 484 aa24.12■■□□□ 1.45
TPM4-208ENST00000588410 RASGRF1Q13972 1273 aa24.12■■□□□ 1.45
TPM4-208ENST00000588410 TMEM39BQ9GZU3 492 aa24.12■■□□□ 1.45
TPM4-208ENST00000588410 RNF186Q9NXI6 227 aa24.12■■□□□ 1.45
TPM4-208ENST00000588410 RCAN3Q9UKA8 241 aa24.12■■□□□ 1.45
TPM4-208ENST00000588410 UNCXA6NJT0 531 aa24.11■■□□□ 1.45
TPM4-208ENST00000588410 DIXDC1Q155Q3 683 aa24.11■■□□□ 1.45
TPM4-208ENST00000588410 ABCF2Q9UG63 623 aa24.11■■□□□ 1.45
TPM4-208ENST00000588410 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.11■■□□□ 1.45
TPM4-208ENST00000588410 PDS5AQ29RF7 1337 aaKnown RBP24.1■■□□□ 1.45
TPM4-208ENST00000588410 USP2O75604 605 aaPredicted RBP24.1■■□□□ 1.45
TPM4-208ENST00000588410 CAPN15O75808 1086 aa24.1■■□□□ 1.45
TPM4-208ENST00000588410 SPTY2D1Q68D10 685 aaPredicted RBP24.1■■□□□ 1.45
TPM4-208ENST00000588410 DAGLAQ9Y4D2 1042 aa24.1■■□□□ 1.45
TPM4-208ENST00000588410 SSC5DA1L4H1 1573 aa24.1■■□□□ 1.45
TPM4-208ENST00000588410 SREBF2Q12772 1141 aa24.09■■□□□ 1.45
TPM4-208ENST00000588410 FKBP1CQ5VVH2 108 aa24.09■■□□□ 1.45
TPM4-208ENST00000588410 SPRYD7Q5W111 196 aa24.09■■□□□ 1.45
TPM4-208ENST00000588410 DZIP1Q86YF9 867 aaKnown RBP24.09■■□□□ 1.45
TPM4-208ENST00000588410 ANKRD13AQ8IZ07 590 aa24.09■■□□□ 1.45
TPM4-208ENST00000588410 TEPSINQ96N21 525 aa24.09■■□□□ 1.45
TPM4-208ENST00000588410 ARAP2Q8WZ64 1704 aa24.09■■□□□ 1.45
TPM4-208ENST00000588410 FAM83AQ86UY5 434 aa24.08■■□□□ 1.45
TPM4-208ENST00000588410 SLF2Q8IX21 1173 aa24.08■■□□□ 1.45
TPM4-208ENST00000588410 HOOK2Q96ED9 719 aa24.08■■□□□ 1.45
TPM4-208ENST00000588410 CLMNQ96JQ2 1002 aa24.08■■□□□ 1.45
TPM4-208ENST00000588410 GPR108Q9NPR9 543 aa24.08■■□□□ 1.45
TPM4-208ENST00000588410 CEP85Q6P2H3 762 aa24.07■■□□□ 1.44
TPM4-208ENST00000588410 CDAN1Q8IWY9 1227 aa24.07■■□□□ 1.44
TPM4-208ENST00000588410 UQCRFS1P1P0C7P4 283 aa24.06■■□□□ 1.44
TPM4-208ENST00000588410 TNNI3KQ59H18 835 aa24.06■■□□□ 1.44
TPM4-208ENST00000588410 CDC42EP5Q6NZY7 148 aa24.06■■□□□ 1.44
TPM4-208ENST00000588410 ERICH6Q7L0X2 663 aa24.06■■□□□ 1.44
TPM4-208ENST00000588410 SPATA5Q8NB90 893 aa24.06■■□□□ 1.44
TPM4-208ENST00000588410 USP40Q9NVE5 1235 aa24.06■■□□□ 1.44
TPM4-208ENST00000588410 HMG20BQ9P0W2 317 aa24.06■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms