RNA–Protein interactions for RNA: ENST00000588274.1

CLPTM1-208, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2

Gene CLPTM1, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-208ENST00000588274 DZIP1LQ8IYY4 767 aaKnown RBP17.51■□□□□ 0.39
CLPTM1-208ENST00000588274 VGLL2Q8N8G2 317 aa17.51■□□□□ 0.39
CLPTM1-208ENST00000588274 TMEM39BQ9GZU3 492 aa17.51■□□□□ 0.39
CLPTM1-208ENST00000588274 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.51■□□□□ 0.39
CLPTM1-208ENST00000588274 TTF2Q9UNY4 1162 aaKnown RBP17.51■□□□□ 0.39
CLPTM1-208ENST00000588274 RIPOR2Q9Y4F9 1068 aa17.51■□□□□ 0.39
CLPTM1-208ENST00000588274 PLIN1O60240 522 aa17.5■□□□□ 0.39
CLPTM1-208ENST00000588274 ALDH1L1O75891 902 aa17.5■□□□□ 0.39
CLPTM1-208ENST00000588274 NBPF7P0C2Y1 421 aaPredicted RBP17.5■□□□□ 0.39
CLPTM1-208ENST00000588274 TNFAIP1Q13829 316 aa17.5■□□□□ 0.39
CLPTM1-208ENST00000588274 RABL6Q3YEC7 729 aaPredicted RBP17.5■□□□□ 0.39
CLPTM1-208ENST00000588274 CNNM1Q9NRU3 951 aa17.5■□□□□ 0.39
CLPTM1-208ENST00000588274 HIBADHP31937 336 aaKnown RBP17.49■□□□□ 0.39
CLPTM1-208ENST00000588274 CRKP46108 304 aa17.49■□□□□ 0.39
CLPTM1-208ENST00000588274 RBM5P52756 815 aaKnown RBP eCLIP17.49■□□□□ 0.39
CLPTM1-208ENST00000588274 SP3Q02447 781 aa17.49■□□□□ 0.39
CLPTM1-208ENST00000588274 FBXO33Q7Z6M2 555 aa17.49■□□□□ 0.39
CLPTM1-208ENST00000588274 FAM43AQ8N2R8 423 aa17.49■□□□□ 0.39
CLPTM1-208ENST00000588274 ANKRD44Q8N8A2 993 aa17.49■□□□□ 0.39
CLPTM1-208ENST00000588274 ZNF333Q96JL9 665 aa17.48■□□□□ 0.39
CLPTM1-208ENST00000588274 EFCC1Q9HA90 598 aa17.48■□□□□ 0.39
CLPTM1-208ENST00000588274 MRS2Q9HD23 443 aa17.48■□□□□ 0.39
CLPTM1-208ENST00000588274 SALL2Q9Y467 1007 aaPredicted RBP17.48■□□□□ 0.39
CLPTM1-208ENST00000588274 SNCAIPQ9Y6H5 919 aa17.48■□□□□ 0.39
CLPTM1-208ENST00000588274 ZNF521Q96K83 1311 aa17.47■□□□□ 0.39
CLPTM1-208ENST00000588274 TCP10L2B9ZVM9 353 aa17.47■□□□□ 0.39
CLPTM1-208ENST00000588274 EN2P19622 333 aaPredicted RBP17.47■□□□□ 0.39
CLPTM1-208ENST00000588274 TAF7LQ5H9L4 462 aa17.47■□□□□ 0.39
CLPTM1-208ENST00000588274 HABP4Q5JVS0 413 aaKnown RBP17.47■□□□□ 0.39
CLPTM1-208ENST00000588274 SRCIN1Q9C0H9 1055 aa17.47■□□□□ 0.39
CLPTM1-208ENST00000588274 RPAP1Q9BWH6 1393 aaPredicted RBP17.46■□□□□ 0.39
CLPTM1-208ENST00000588274 SPDYE5A6NIY4 337 aa17.46■□□□□ 0.39
CLPTM1-208ENST00000588274 CACNB3P54284 484 aa17.46■□□□□ 0.39
CLPTM1-208ENST00000588274 LRRC24Q50LG9 513 aa17.46■□□□□ 0.39
CLPTM1-208ENST00000588274 OTUD7BQ6GQQ9 843 aa17.46■□□□□ 0.39
CLPTM1-208ENST00000588274 BICC1Q9H694 974 aaKnown RBP17.46■□□□□ 0.39
CLPTM1-208ENST00000588274 C9orf78Q9NZ63 289 aaPredicted RBP17.46■□□□□ 0.39
CLPTM1-208ENST00000588274 IQSEC3Q9UPP2 1182 aaPredicted RBP17.46■□□□□ 0.39
CLPTM1-208ENST00000588274 PTCH2Q9Y6C5 1203 aa17.46■□□□□ 0.39
CLPTM1-208ENST00000588274 RANBP2P49792 3224 aaKnown RBP17.46■□□□□ 0.39
CLPTM1-208ENST00000588274 MROH5Q6ZUA9 1318 aa17.46■□□□□ 0.38
CLPTM1-208ENST00000588274 CCL15-CCL14A0A0B4J2E2 113 aa17.45■□□□□ 0.38
CLPTM1-208ENST00000588274 HDLBPQ00341 1268 aaKnown RBP17.45■□□□□ 0.38
CLPTM1-208ENST00000588274 CCL15Q16663 113 aa17.45■□□□□ 0.38
CLPTM1-208ENST00000588274 OTUD5Q96G74 571 aa17.45■□□□□ 0.38
CLPTM1-208ENST00000588274 SZT2Q5T011 3432 aa17.44■□□□□ 0.38
CLPTM1-208ENST00000588274 MAP3K9P80192 1104 aa17.44■□□□□ 0.38
CLPTM1-208ENST00000588274 TAF1CQ15572 869 aaPredicted RBP17.44■□□□□ 0.38
CLPTM1-208ENST00000588274 APOBEC3HQ6NTF7 200 aaKnown RBP17.44■□□□□ 0.38
CLPTM1-208ENST00000588274 SLC4A10Q6U841 1118 aa17.44■□□□□ 0.38
CLPTM1-208ENST00000588274 GCC1Q96CN9 775 aa17.44■□□□□ 0.38
CLPTM1-208ENST00000588274 ARHGAP39Q9C0H5 1083 aa17.44■□□□□ 0.38
CLPTM1-208ENST00000588274 FGFR2P21802 821 aa17.43■□□□□ 0.38
CLPTM1-208ENST00000588274 GTF2A2P52657 109 aa17.43■□□□□ 0.38
CLPTM1-208ENST00000588274 ZDHHC15Q96MV8 337 aa17.43■□□□□ 0.38
CLPTM1-208ENST00000588274 KIF16BQ96L93 1317 aa17.43■□□□□ 0.38
CLPTM1-208ENST00000588274 BTBD19C9JJ37 291 aa17.42■□□□□ 0.38
CLPTM1-208ENST00000588274 PDE8BO95263 885 aa17.42■□□□□ 0.38
CLPTM1-208ENST00000588274 KLHDC4Q8TBB5 520 aa17.42■□□□□ 0.38
CLPTM1-208ENST00000588274 ADGRA2Q96PE1 1338 aa17.42■□□□□ 0.38
CLPTM1-208ENST00000588274 IRF6O14896 467 aa17.41■□□□□ 0.38
CLPTM1-208ENST00000588274 TLR2O60603 784 aa17.41■□□□□ 0.38
CLPTM1-208ENST00000588274 CTGFP29279 349 aa17.41■□□□□ 0.38
CLPTM1-208ENST00000588274 TNNI2P48788 182 aa17.41■□□□□ 0.38
CLPTM1-208ENST00000588274 BCAMP50895 628 aa17.41■□□□□ 0.38
CLPTM1-208ENST00000588274 CHAF1AQ13111 956 aaPredicted RBP17.41■□□□□ 0.38
CLPTM1-208ENST00000588274 FKBP1CQ5VVH2 108 aa17.41■□□□□ 0.38
CLPTM1-208ENST00000588274 FAM83AQ86UY5 434 aa17.41■□□□□ 0.38
CLPTM1-208ENST00000588274 TBC1D22AQ8WUA7 517 aa17.41■□□□□ 0.38
CLPTM1-208ENST00000588274 ZKSCAN4Q969J2 545 aaPredicted RBP17.41■□□□□ 0.38
CLPTM1-208ENST00000588274 TEKT1Q969V4 418 aa17.41■□□□□ 0.38
CLPTM1-208ENST00000588274 MRIQ9BWK5 157 aa17.41■□□□□ 0.38
CLPTM1-208ENST00000588274 ZFYVE28Q9HCC9 887 aa17.41■□□□□ 0.38
CLPTM1-208ENST00000588274 ZCCHC17Q9NP64 241 aaKnown RBP17.41■□□□□ 0.38
CLPTM1-208ENST00000588274 CSADQ9Y600 493 aa17.41■□□□□ 0.38
CLPTM1-208ENST00000588274 RFX5P48382 616 aaPredicted RBP17.4■□□□□ 0.38
CLPTM1-208ENST00000588274 FXR1P51114 621 aaKnown RBP eCLIP17.4■□□□□ 0.38
CLPTM1-208ENST00000588274 MRPL50Q8N5N7 158 aaKnown RBP17.4■□□□□ 0.38
CLPTM1-208ENST00000588274 WRNIP1Q96S55 665 aa17.4■□□□□ 0.38
CLPTM1-208ENST00000588274 LACTBP83111 547 aaPredicted RBP17.39■□□□□ 0.37
CLPTM1-208ENST00000588274 MOGSQ13724 837 aa17.39■□□□□ 0.37
CLPTM1-208ENST00000588274 SLC9C1Q4G0N8 1177 aa17.39■□□□□ 0.37
CLPTM1-208ENST00000588274 METTL24Q5JXM2 366 aa17.39■□□□□ 0.37
CLPTM1-208ENST00000588274 ERO1BQ86YB8 467 aa17.39■□□□□ 0.37
CLPTM1-208ENST00000588274 ATRNL1Q5VV63 1379 aa17.39■□□□□ 0.37
CLPTM1-208ENST00000588274 MYH13Q9UKX3 1938 aa17.39■□□□□ 0.37
CLPTM1-208ENST00000588274 CETPP11597 493 aa17.38■□□□□ 0.37
CLPTM1-208ENST00000588274 PPIL2Q13356 520 aa17.38■□□□□ 0.37
CLPTM1-208ENST00000588274 HHIPL2Q6UWX4 724 aa17.38■□□□□ 0.37
CLPTM1-208ENST00000588274 SHISA4Q96DD7 197 aa17.38■□□□□ 0.37
CLPTM1-208ENST00000588274 USP44Q9H0E7 712 aa17.38■□□□□ 0.37
CLPTM1-208ENST00000588274 SUGT1Q9Y2Z0 365 aa17.38■□□□□ 0.37
CLPTM1-208ENST00000588274 RFX7Q2KHR2 1363 aa17.38■□□□□ 0.37
CLPTM1-208ENST00000588274 INPP5BP32019 993 aa17.37■□□□□ 0.37
CLPTM1-208ENST00000588274 CAVIN4Q5BKX8 364 aa17.37■□□□□ 0.37
CLPTM1-208ENST00000588274 C17orf99Q6UX52 265 aa17.37■□□□□ 0.37
CLPTM1-208ENST00000588274 SH3TC2Q8TF17 1288 aa17.37■□□□□ 0.37
CLPTM1-208ENST00000588274 CEP290O15078 2479 aa17.37■□□□□ 0.37
CLPTM1-208ENST00000588274 SNAPC2Q13487 334 aa17.36■□□□□ 0.37
CLPTM1-208ENST00000588274 PUM3Q15397 648 aaKnown RBP17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms