RNA–Protein interactions for RNA: ENST00000588259.5

TMED1-203, Transcript of transmembrane p24 trafficking protein 1, humanhuman

TSL 5

Gene TMED1, Length 616 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED1-203ENST00000588259 HPS5Q9UPZ3 1129 aa21.21■□□□□ 0.99
TMED1-203ENST00000588259 IFIT1P09914 478 aaKnown RBP21.2■□□□□ 0.98
TMED1-203ENST00000588259 TNNI2P48788 182 aa21.2■□□□□ 0.98
TMED1-203ENST00000588259 BCAMP50895 628 aa21.2■□□□□ 0.98
TMED1-203ENST00000588259 PUM3Q15397 648 aaKnown RBP21.2■□□□□ 0.98
TMED1-203ENST00000588259 GRIK5Q16478 980 aa21.2■□□□□ 0.98
TMED1-203ENST00000588259 PKN2Q16513 984 aaKnown RBP21.2■□□□□ 0.98
TMED1-203ENST00000588259 VGLL2Q8N8G2 317 aa21.2■□□□□ 0.98
TMED1-203ENST00000588259 USP2O75604 605 aaPredicted RBP21.19■□□□□ 0.98
TMED1-203ENST00000588259 INHBEP58166 350 aa21.19■□□□□ 0.98
TMED1-203ENST00000588259 IFNL1Q8IU54 200 aa21.19■□□□□ 0.98
TMED1-203ENST00000588259 ANKRD13AQ8IZ07 590 aa21.19■□□□□ 0.98
TMED1-203ENST00000588259 TEKT1Q969V4 418 aa21.19■□□□□ 0.98
TMED1-203ENST00000588259 R3HDMLQ9H3Y0 253 aa21.19■□□□□ 0.98
TMED1-203ENST00000588259 PDE4DIPQ5VU43 2346 aa21.18■□□□□ 0.98
TMED1-203ENST00000588259 UBTFL1P0CB47 393 aaPredicted RBP21.18■□□□□ 0.98
TMED1-203ENST00000588259 SLC5A1P13866 664 aa21.18■□□□□ 0.98
TMED1-203ENST00000588259 CDAN1Q8IWY9 1227 aa21.18■□□□□ 0.98
TMED1-203ENST00000588259 TMEM39BQ9GZU3 492 aa21.18■□□□□ 0.98
TMED1-203ENST00000588259 ELP3Q9H9T3 547 aa21.18■□□□□ 0.98
TMED1-203ENST00000588259 TMOD2Q9NZR1 351 aa21.18■□□□□ 0.98
TMED1-203ENST00000588259 UNCXA6NJT0 531 aa21.17■□□□□ 0.98
TMED1-203ENST00000588259 CACNB3P54284 484 aa21.17■□□□□ 0.98
TMED1-203ENST00000588259 NOM1Q5C9Z4 860 aaKnown RBP21.17■□□□□ 0.98
TMED1-203ENST00000588259 SIL1Q9H173 461 aa21.17■□□□□ 0.98
TMED1-203ENST00000588259 LAMB1P07942 1786 aa21.17■□□□□ 0.98
TMED1-203ENST00000588259 MAST3O60307 1309 aa21.16■□□□□ 0.98
TMED1-203ENST00000588259 EYA2O00167 538 aa21.16■□□□□ 0.98
TMED1-203ENST00000588259 IGF2BP3O00425 579 aaKnown RBP eCLIP21.16■□□□□ 0.98
TMED1-203ENST00000588259 OTUD7BQ6GQQ9 843 aa21.16■□□□□ 0.98
TMED1-203ENST00000588259 GJA5P36382 358 aa21.15■□□□□ 0.98
TMED1-203ENST00000588259 OPTNQ96CV9 577 aa21.15■□□□□ 0.98
TMED1-203ENST00000588259 CFHR5Q9BXR6 569 aa21.15■□□□□ 0.98
TMED1-203ENST00000588259 NOB1Q9ULX3 412 aaKnown RBP21.15■□□□□ 0.98
TMED1-203ENST00000588259 KIF16BQ96L93 1317 aa21.14■□□□□ 0.97
TMED1-203ENST00000588259 HDLBPQ00341 1268 aaKnown RBP21.14■□□□□ 0.97
TMED1-203ENST00000588259 FBXO46Q6PJ61 603 aaPredicted RBP21.14■□□□□ 0.97
TMED1-203ENST00000588259 TEPSINQ96N21 525 aa21.14■□□□□ 0.97
TMED1-203ENST00000588259 CSADQ9Y600 493 aa21.14■□□□□ 0.97
TMED1-203ENST00000588259 FGFR2P21802 821 aa21.13■□□□□ 0.97
TMED1-203ENST00000588259 RFX5P48382 616 aaPredicted RBP21.13■□□□□ 0.97
TMED1-203ENST00000588259 LPIN2Q92539 896 aa21.13■□□□□ 0.97
TMED1-203ENST00000588259 API5Q9BZZ5 524 aaKnown RBP21.13■□□□□ 0.97
TMED1-203ENST00000588259 AK9Q5TCS8 1911 aa21.12■□□□□ 0.97
TMED1-203ENST00000588259 CRHR2Q13324 411 aa21.12■□□□□ 0.97
TMED1-203ENST00000588259 VGLL4Q14135 290 aa21.12■□□□□ 0.97
TMED1-203ENST00000588259 CNKSR2Q8WXI2 1034 aa21.12■□□□□ 0.97
TMED1-203ENST00000588259 ZDHHC15Q96MV8 337 aa21.12■□□□□ 0.97
TMED1-203ENST00000588259 TRIM17Q9Y577 477 aa21.12■□□□□ 0.97
TMED1-203ENST00000588259 LRRFIP2Q9Y608 721 aaKnown RBP21.12■□□□□ 0.97
TMED1-203ENST00000588259 CT47B1P0C2W7 299 aaPredicted RBP21.11■□□□□ 0.97
TMED1-203ENST00000588259 MAP3K9P80192 1104 aa21.11■□□□□ 0.97
TMED1-203ENST00000588259 ATP2B3Q16720 1220 aa21.11■□□□□ 0.97
TMED1-203ENST00000588259 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.11■□□□□ 0.97
TMED1-203ENST00000588259 WDR66Q8TBY9 1149 aa21.11■□□□□ 0.97
TMED1-203ENST00000588259 OTUD5Q96G74 571 aa21.11■□□□□ 0.97
TMED1-203ENST00000588259 CEP126Q9P2H0 1117 aa21.11■□□□□ 0.97
TMED1-203ENST00000588259 SUGT1Q9Y2Z0 365 aa21.11■□□□□ 0.97
TMED1-203ENST00000588259 TNRC18O15417 2968 aaPredicted RBP21.1■□□□□ 0.97
TMED1-203ENST00000588259 ATG9AQ7Z3C6 839 aa21.1■□□□□ 0.97
TMED1-203ENST00000588259 TRMT2AQ8IZ69 625 aaKnown RBP21.1■□□□□ 0.97
TMED1-203ENST00000588259 GNL3LQ9NVN8 582 aaKnown RBP21.1■□□□□ 0.97
TMED1-203ENST00000588259 HDAC5Q9UQL6 1122 aa21.1■□□□□ 0.97
TMED1-203ENST00000588259 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.09■□□□□ 0.97
TMED1-203ENST00000588259 HOOK2Q96ED9 719 aa21.09■□□□□ 0.97
TMED1-203ENST00000588259 ERO1AQ96HE7 468 aa21.09■□□□□ 0.97
TMED1-203ENST00000588259 WRNIP1Q96S55 665 aa21.09■□□□□ 0.97
TMED1-203ENST00000588259 CCL15-CCL14A0A0B4J2E2 113 aa21.08■□□□□ 0.97
TMED1-203ENST00000588259 CIAO1O76071 339 aa21.08■□□□□ 0.97
TMED1-203ENST00000588259 CCL15Q16663 113 aa21.08■□□□□ 0.97
TMED1-203ENST00000588259 APOBEC3HQ6NTF7 200 aaKnown RBP21.08■□□□□ 0.97
TMED1-203ENST00000588259 HHIPL2Q6UWX4 724 aa21.08■□□□□ 0.97
TMED1-203ENST00000588259 CD99L2Q8TCZ2 262 aa21.08■□□□□ 0.97
TMED1-203ENST00000588259 PTPN18Q99952 460 aa21.08■□□□□ 0.97
TMED1-203ENST00000588259 PA2G4Q9UQ80 394 aaKnown RBP21.08■□□□□ 0.97
TMED1-203ENST00000588259 GTF2A2P52657 109 aa21.07■□□□□ 0.96
TMED1-203ENST00000588259 OTOP1Q7RTM1 612 aa21.07■□□□□ 0.96
TMED1-203ENST00000588259 FAM83AQ86UY5 434 aa21.07■□□□□ 0.96
TMED1-203ENST00000588259 BRI3BPQ8WY22 251 aa21.07■□□□□ 0.96
TMED1-203ENST00000588259 MEIS3Q99687 375 aa21.07■□□□□ 0.96
TMED1-203ENST00000588259 FBXO3Q9UK99 471 aa21.07■□□□□ 0.96
TMED1-203ENST00000588259 LDHBP07195 334 aaKnown RBP21.06■□□□□ 0.96
TMED1-203ENST00000588259 IL15P40933 162 aaPredicted RBP21.06■□□□□ 0.96
TMED1-203ENST00000588259 TAF1CQ15572 869 aaPredicted RBP21.06■□□□□ 0.96
TMED1-203ENST00000588259 DIXDC1Q155Q3 683 aa21.06■□□□□ 0.96
TMED1-203ENST00000588259 FKBP1CQ5VVH2 108 aa21.06■□□□□ 0.96
TMED1-203ENST00000588259 DCAF15Q66K64 600 aa21.06■□□□□ 0.96
TMED1-203ENST00000588259 MS4A4AQ96JQ5 239 aa21.06■□□□□ 0.96
TMED1-203ENST00000588259 MRIQ9BWK5 157 aa21.06■□□□□ 0.96
TMED1-203ENST00000588259 TESPA1A2RU30 521 aaPredicted RBP21.05■□□□□ 0.96
TMED1-203ENST00000588259 CCER2I3L3R5 266 aa21.05■□□□□ 0.96
TMED1-203ENST00000588259 PRDX5P30044 214 aa21.05■□□□□ 0.96
TMED1-203ENST00000588259 RARSP54136 660 aaKnown RBP21.05■□□□□ 0.96
TMED1-203ENST00000588259 SP3Q02447 781 aa21.05■□□□□ 0.96
TMED1-203ENST00000588259 TCP10Q12799 353 aa21.05■□□□□ 0.96
TMED1-203ENST00000588259 ZKSCAN4Q969J2 545 aaPredicted RBP21.05■□□□□ 0.96
TMED1-203ENST00000588259 DAGLAQ9Y4D2 1042 aa21.05■□□□□ 0.96
TMED1-203ENST00000588259 SPDYE5A6NIY4 337 aa21.04■□□□□ 0.96
TMED1-203ENST00000588259 WDHD1O75717 1129 aaPredicted RBP21.04■□□□□ 0.96
TMED1-203ENST00000588259 PHKA1P46020 1223 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms