RNA–Protein interactions for RNA: ENST00000588032.5

TPM4-207, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 712 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-207ENST00000588032 HHIPL2Q6UWX4 724 aa12.43□□□□□ -0.42
TPM4-207ENST00000588032 TEKT1Q969V4 418 aa12.43□□□□□ -0.42
TPM4-207ENST00000588032 HHIPL1Q96JK4 782 aa12.43□□□□□ -0.42
TPM4-207ENST00000588032 PRMT6Q96LA8 375 aaPredicted RBP12.43□□□□□ -0.42
TPM4-207ENST00000588032 TLL2Q9Y6L7 1015 aa12.43□□□□□ -0.42
TPM4-207ENST00000588032 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.43□□□□□ -0.42
TPM4-207ENST00000588032 LDHBP07195 334 aaKnown RBP12.42□□□□□ -0.42
TPM4-207ENST00000588032 ARID4AP29374 1257 aaPredicted RBP12.42□□□□□ -0.42
TPM4-207ENST00000588032 CRKP46108 304 aa12.42□□□□□ -0.42
TPM4-207ENST00000588032 FKBP1BP68106 108 aa12.42□□□□□ -0.42
TPM4-207ENST00000588032 RASGRF1Q13972 1273 aa12.42□□□□□ -0.42
TPM4-207ENST00000588032 SPTY2D1Q68D10 685 aaPredicted RBP12.42□□□□□ -0.42
TPM4-207ENST00000588032 SIRT2Q8IXJ6 389 aa12.42□□□□□ -0.42
TPM4-207ENST00000588032 C2orf69Q8N8R5 385 aa12.42□□□□□ -0.42
TPM4-207ENST00000588032 JMYQ8N9B5 988 aa12.42□□□□□ -0.42
TPM4-207ENST00000588032 KIF1BPQ96EK5 621 aa12.42□□□□□ -0.42
TPM4-207ENST00000588032 CDCA5Q96FF9 252 aa12.42□□□□□ -0.42
TPM4-207ENST00000588032 ZNF512BQ96KM6 892 aaPredicted RBP12.42□□□□□ -0.42
TPM4-207ENST00000588032 ZDHHC15Q96MV8 337 aa12.42□□□□□ -0.42
TPM4-207ENST00000588032 ZNF408Q9H9D4 720 aa12.42□□□□□ -0.42
TPM4-207ENST00000588032 EXOC6BQ9Y2D4 811 aa12.42□□□□□ -0.42
TPM4-207ENST00000588032 PPP2R3BQ9Y5P8 575 aa12.42□□□□□ -0.42
TPM4-207ENST00000588032 CNTNAP1P78357 1384 aa12.42□□□□□ -0.42
TPM4-207ENST00000588032 IGSF3O75054 1194 aa12.41□□□□□ -0.42
TPM4-207ENST00000588032 NF2P35240 595 aa12.41□□□□□ -0.42
TPM4-207ENST00000588032 ECE1P42892 770 aa12.41□□□□□ -0.42
TPM4-207ENST00000588032 AAMPQ13685 434 aa12.41□□□□□ -0.42
TPM4-207ENST00000588032 TNFAIP1Q13829 316 aa12.41□□□□□ -0.42
TPM4-207ENST00000588032 GRIK5Q16478 980 aa12.41□□□□□ -0.42
TPM4-207ENST00000588032 SAPCD2Q86UD0 394 aa12.41□□□□□ -0.42
TPM4-207ENST00000588032 SLF2Q8IX21 1173 aa12.41□□□□□ -0.42
TPM4-207ENST00000588032 SPATA5Q8NB90 893 aa12.41□□□□□ -0.42
TPM4-207ENST00000588032 RHPN1Q8TCX5 695 aa12.41□□□□□ -0.42
TPM4-207ENST00000588032 GBA2Q9HCG7 927 aaPredicted RBP12.41□□□□□ -0.42
TPM4-207ENST00000588032 SPDYE2Q495Y8 402 aa12.4□□□□□ -0.42
TPM4-207ENST00000588032 TTC39AQ5SRH9 613 aa12.4□□□□□ -0.42
TPM4-207ENST00000588032 CLASRPQ8N2M8 674 aaKnown RBP12.4□□□□□ -0.42
TPM4-207ENST00000588032 EAF2Q96CJ1 260 aaPredicted RBP12.4□□□□□ -0.42
TPM4-207ENST00000588032 DEFB129Q9H1M3 183 aa12.4□□□□□ -0.42
TPM4-207ENST00000588032 HMG20BQ9P0W2 317 aa12.4□□□□□ -0.42
TPM4-207ENST00000588032 ZNF70Q9UC06 446 aaPredicted RBP12.4□□□□□ -0.42
TPM4-207ENST00000588032 MKRN1Q9UHC7 482 aaKnown RBP12.4□□□□□ -0.42
TPM4-207ENST00000588032 COL1A1P02452 1464 aaPredicted RBP12.4□□□□□ -0.43
TPM4-207ENST00000588032 ARAP2Q8WZ64 1704 aa12.4□□□□□ -0.43
TPM4-207ENST00000588032 PRDX5P30044 214 aa12.39□□□□□ -0.43
TPM4-207ENST00000588032 TNNI2P48788 182 aa12.39□□□□□ -0.43
TPM4-207ENST00000588032 SUPT20HL1Q3ZLR7 823 aa12.39□□□□□ -0.43
TPM4-207ENST00000588032 ERICH6Q7L0X2 663 aa12.39□□□□□ -0.43
TPM4-207ENST00000588032 DBNDD2Q9BQY9 259 aa12.39□□□□□ -0.43
TPM4-207ENST00000588032 TDRD3Q9H7E2 651 aaKnown RBP12.39□□□□□ -0.43
TPM4-207ENST00000588032 TMOD2Q9NZR1 351 aa12.39□□□□□ -0.43
TPM4-207ENST00000588032 ABCF2Q9UG63 623 aa12.39□□□□□ -0.43
TPM4-207ENST00000588032 PCDHAC2Q9Y5I4 1007 aa12.39□□□□□ -0.43
TPM4-207ENST00000588032 TRPM7Q96QT4 1865 aa12.39□□□□□ -0.43
TPM4-207ENST00000588032 CLRN2A0PK11 232 aa12.38□□□□□ -0.43
TPM4-207ENST00000588032 DSG3P32926 999 aa12.38□□□□□ -0.43
TPM4-207ENST00000588032 MCAMP43121 646 aa12.38□□□□□ -0.43
TPM4-207ENST00000588032 VEGFBP49765 207 aa12.38□□□□□ -0.43
TPM4-207ENST00000588032 HUNKP57058 714 aa12.38□□□□□ -0.43
TPM4-207ENST00000588032 FKBP1CQ5VVH2 108 aa12.38□□□□□ -0.43
TPM4-207ENST00000588032 APOBEC3HQ6NTF7 200 aaKnown RBP12.38□□□□□ -0.43
TPM4-207ENST00000588032 DLK2Q6UY11 383 aa12.38□□□□□ -0.43
TPM4-207ENST00000588032 AACSQ86V21 672 aa12.38□□□□□ -0.43
TPM4-207ENST00000588032 FAM163AQ96GL9 167 aaPredicted RBP12.38□□□□□ -0.43
TPM4-207ENST00000588032 CCDC8Q9H0W5 538 aaPredicted RBP12.38□□□□□ -0.43
TPM4-207ENST00000588032 VEZTQ9HBM0 779 aa12.38□□□□□ -0.43
TPM4-207ENST00000588032 DBNLQ9UJU6 430 aaKnown RBP12.38□□□□□ -0.43
TPM4-207ENST00000588032 LDHCP07864 332 aa12.37□□□□□ -0.43
TPM4-207ENST00000588032 IFIT2P09913 472 aaKnown RBP12.37□□□□□ -0.43
TPM4-207ENST00000588032 GSTO1P78417 241 aa12.37□□□□□ -0.43
TPM4-207ENST00000588032 RASA3Q14644 834 aa12.37□□□□□ -0.43
TPM4-207ENST00000588032 DZIP1Q86YF9 867 aaKnown RBP12.37□□□□□ -0.43
TPM4-207ENST00000588032 CCDC102AQ96A19 550 aa12.37□□□□□ -0.43
TPM4-207ENST00000588032 IL1RAPL2Q9NP60 686 aa12.37□□□□□ -0.43
TPM4-207ENST00000588032 SCAF8Q9UPN6 1271 aaKnown RBP12.37□□□□□ -0.43
TPM4-207ENST00000588032 DAGLAQ9Y4D2 1042 aa12.37□□□□□ -0.43
TPM4-207ENST00000588032 POLR2AP24928 1970 aaKnown RBP12.37□□□□□ -0.43
TPM4-207ENST00000588032 WDR33Q9C0J8 1336 aaKnown RBP12.37□□□□□ -0.43
TPM4-207ENST00000588032 UNCXA6NJT0 531 aa12.36□□□□□ -0.43
TPM4-207ENST00000588032 MAP2K2P36507 400 aa12.36□□□□□ -0.43
TPM4-207ENST00000588032 PRAMEF18Q5VWM3 479 aa12.36□□□□□ -0.43
TPM4-207ENST00000588032 RGMBQ6NW40 437 aa12.36□□□□□ -0.43
TPM4-207ENST00000588032 PAXIP1Q6ZW49 1069 aaPredicted RBP12.36□□□□□ -0.43
TPM4-207ENST00000588032 ARMC9Q7Z3E5 817 aa12.36□□□□□ -0.43
TPM4-207ENST00000588032 FAM83AQ86UY5 434 aa12.36□□□□□ -0.43
TPM4-207ENST00000588032 CAPNS2Q96L46 248 aa12.36□□□□□ -0.43
TPM4-207ENST00000588032 CRBNQ96SW2 442 aa12.36□□□□□ -0.43
TPM4-207ENST00000588032 LRRCC1Q9C099 1032 aa12.36□□□□□ -0.43
TPM4-207ENST00000588032 DCTPP1Q9H773 170 aa12.36□□□□□ -0.43
TPM4-207ENST00000588032 LRP2BPQ9P2M1 347 aa12.36□□□□□ -0.43
TPM4-207ENST00000588032 GAKO14976 1311 aa12.36□□□□□ -0.43
TPM4-207ENST00000588032 APBB1O00213 710 aa12.35□□□□□ -0.43
TPM4-207ENST00000588032 PPP1R12BO60237 982 aaPredicted RBP12.35□□□□□ -0.43
TPM4-207ENST00000588032 MAP4K4O95819 1239 aaPredicted RBP12.35□□□□□ -0.43
TPM4-207ENST00000588032 MECOMQ03112 1051 aa12.35□□□□□ -0.43
TPM4-207ENST00000588032 TTLL12Q14166 644 aaPredicted RBP12.35□□□□□ -0.43
TPM4-207ENST00000588032 DIXDC1Q155Q3 683 aa12.35□□□□□ -0.43
TPM4-207ENST00000588032 TMED8Q6PL24 325 aaPredicted RBP12.35□□□□□ -0.43
TPM4-207ENST00000588032 PI16Q6UXB8 463 aa12.35□□□□□ -0.43
TPM4-207ENST00000588032 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms