RNA–Protein interactions for RNA: ENST00000587721.1

RDH13-209, Transcript of retinol dehydrogenase 13, humanhuman

TSL 4

Gene RDH13, Length 731 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH13-209ENST00000587721 R3HDMLQ9H3Y0 253 aa17.24■□□□□ 0.35
RDH13-209ENST00000587721 TRIM17Q9Y577 477 aa17.24■□□□□ 0.35
RDH13-209ENST00000587721 ECM29Q5VYK3 1845 aa17.24■□□□□ 0.35
RDH13-209ENST00000587721 MAST3O60307 1309 aa17.23■□□□□ 0.35
RDH13-209ENST00000587721 A0A1B0GUL6 1792 aa17.23■□□□□ 0.35
RDH13-209ENST00000587721 TCP10L2B9ZVM9 353 aa17.23■□□□□ 0.35
RDH13-209ENST00000587721 IGF2BP3O00425 579 aaKnown RBP eCLIP17.23■□□□□ 0.35
RDH13-209ENST00000587721 WDHD1O75717 1129 aaPredicted RBP17.23■□□□□ 0.35
RDH13-209ENST00000587721 IFIT1P09914 478 aaKnown RBP17.23■□□□□ 0.35
RDH13-209ENST00000587721 LRRC24Q50LG9 513 aa17.23■□□□□ 0.35
RDH13-209ENST00000587721 ANKRD44Q8N8A2 993 aa17.23■□□□□ 0.35
RDH13-209ENST00000587721 HOOK2Q96ED9 719 aa17.23■□□□□ 0.35
RDH13-209ENST00000587721 MRIQ9BWK5 157 aa17.23■□□□□ 0.35
RDH13-209ENST00000587721 CSADQ9Y600 493 aa17.23■□□□□ 0.35
RDH13-209ENST00000587721 AOX1Q06278 1338 aa17.22■□□□□ 0.35
RDH13-209ENST00000587721 MAP3K9P80192 1104 aa17.22■□□□□ 0.35
RDH13-209ENST00000587721 ARHGEF6Q15052 776 aa17.22■□□□□ 0.35
RDH13-209ENST00000587721 PUM3Q15397 648 aaKnown RBP17.22■□□□□ 0.35
RDH13-209ENST00000587721 INTS3Q68E01 1043 aaKnown RBP17.22■□□□□ 0.35
RDH13-209ENST00000587721 OPTNQ96CV9 577 aa17.22■□□□□ 0.35
RDH13-209ENST00000587721 ELP3Q9H9T3 547 aa17.22■□□□□ 0.35
RDH13-209ENST00000587721 IQSEC3Q9UPP2 1182 aaPredicted RBP17.22■□□□□ 0.35
RDH13-209ENST00000587721 SUGT1Q9Y2Z0 365 aa17.22■□□□□ 0.35
RDH13-209ENST00000587721 KIF16BQ96L93 1317 aa17.21■□□□□ 0.35
RDH13-209ENST00000587721 TESPA1A2RU30 521 aaPredicted RBP17.21■□□□□ 0.35
RDH13-209ENST00000587721 CRHR2Q13324 411 aa17.21■□□□□ 0.35
RDH13-209ENST00000587721 SSH1Q8WYL5 1049 aa17.21■□□□□ 0.35
RDH13-209ENST00000587721 TEPSINQ96N21 525 aa17.21■□□□□ 0.35
RDH13-209ENST00000587721 TMEM39BQ9GZU3 492 aa17.21■□□□□ 0.35
RDH13-209ENST00000587721 USP44Q9H0E7 712 aa17.21■□□□□ 0.35
RDH13-209ENST00000587721 GTF2A2P52657 109 aa17.2■□□□□ 0.34
RDH13-209ENST00000587721 ALDH1L2Q3SY69 923 aa17.2■□□□□ 0.34
RDH13-209ENST00000587721 PRPF38BQ5VTL8 546 aaKnown RBP17.2■□□□□ 0.34
RDH13-209ENST00000587721 OTOP1Q7RTM1 612 aa17.2■□□□□ 0.34
RDH13-209ENST00000587721 VGLL2Q8N8G2 317 aa17.2■□□□□ 0.34
RDH13-209ENST00000587721 ZDHHC15Q96MV8 337 aa17.2■□□□□ 0.34
RDH13-209ENST00000587721 HDAC5Q9UQL6 1122 aa17.2■□□□□ 0.34
RDH13-209ENST00000587721 SLC5A1P13866 664 aa17.19■□□□□ 0.34
RDH13-209ENST00000587721 GJA5P36382 358 aa17.19■□□□□ 0.34
RDH13-209ENST00000587721 BCAMP50895 628 aa17.19■□□□□ 0.34
RDH13-209ENST00000587721 SP3Q02447 781 aa17.19■□□□□ 0.34
RDH13-209ENST00000587721 FKBP1CQ5VVH2 108 aa17.19■□□□□ 0.34
RDH13-209ENST00000587721 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.19■□□□□ 0.34
RDH13-209ENST00000587721 ZFYVE28Q9HCC9 887 aa17.19■□□□□ 0.34
RDH13-209ENST00000587721 EYA2O00167 538 aa17.18■□□□□ 0.34
RDH13-209ENST00000587721 SLFN5Q08AF3 891 aa17.18■□□□□ 0.34
RDH13-209ENST00000587721 VGLL4Q14135 290 aa17.18■□□□□ 0.34
RDH13-209ENST00000587721 FAM83AQ86UY5 434 aa17.18■□□□□ 0.34
RDH13-209ENST00000587721 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.18■□□□□ 0.34
RDH13-209ENST00000587721 KLHDC4Q8TBB5 520 aa17.18■□□□□ 0.34
RDH13-209ENST00000587721 WDR66Q8TBY9 1149 aa17.18■□□□□ 0.34
RDH13-209ENST00000587721 LPIN2Q92539 896 aa17.18■□□□□ 0.34
RDH13-209ENST00000587721 EFCC1Q9HA90 598 aa17.18■□□□□ 0.34
RDH13-209ENST00000587721 SMC4Q9NTJ3 1288 aa17.18■□□□□ 0.34
RDH13-209ENST00000587721 CCL15-CCL14A0A0B4J2E2 113 aa17.17■□□□□ 0.34
RDH13-209ENST00000587721 GRIK5Q16478 980 aa17.17■□□□□ 0.34
RDH13-209ENST00000587721 CCL15Q16663 113 aa17.17■□□□□ 0.34
RDH13-209ENST00000587721 DCAF15Q66K64 600 aa17.17■□□□□ 0.34
RDH13-209ENST00000587721 HHIPL2Q6UWX4 724 aa17.17■□□□□ 0.34
RDH13-209ENST00000587721 OTUD5Q96G74 571 aa17.17■□□□□ 0.34
RDH13-209ENST00000587721 MS4A4AQ96JQ5 239 aa17.17■□□□□ 0.34
RDH13-209ENST00000587721 PTPN18Q99952 460 aa17.17■□□□□ 0.34
RDH13-209ENST00000587721 GNL3LQ9NVN8 582 aaKnown RBP17.17■□□□□ 0.34
RDH13-209ENST00000587721 FBXO3Q9UK99 471 aa17.17■□□□□ 0.34
RDH13-209ENST00000587721 UBTFL1P0CB47 393 aaPredicted RBP17.16■□□□□ 0.34
RDH13-209ENST00000587721 FGFR2P21802 821 aa17.16■□□□□ 0.34
RDH13-209ENST00000587721 TAF1CQ15572 869 aaPredicted RBP17.16■□□□□ 0.34
RDH13-209ENST00000587721 ERO1BQ86YB8 467 aa17.16■□□□□ 0.34
RDH13-209ENST00000587721 CDAN1Q8IWY9 1227 aa17.16■□□□□ 0.34
RDH13-209ENST00000587721 CD99L2Q8TCZ2 262 aa17.16■□□□□ 0.34
RDH13-209ENST00000587721 PTPN22Q9Y2R2 807 aa17.16■□□□□ 0.34
RDH13-209ENST00000587721 SPDYE5A6NIY4 337 aa17.15■□□□□ 0.34
RDH13-209ENST00000587721 CT47B1P0C2W7 299 aaPredicted RBP17.15■□□□□ 0.34
RDH13-209ENST00000587721 CETPP11597 493 aa17.15■□□□□ 0.34
RDH13-209ENST00000587721 CACNB3P54284 484 aa17.15■□□□□ 0.34
RDH13-209ENST00000587721 APOBEC3HQ6NTF7 200 aaKnown RBP17.15■□□□□ 0.34
RDH13-209ENST00000587721 WRNIP1Q96S55 665 aa17.15■□□□□ 0.34
RDH13-209ENST00000587721 ARAP2Q8WZ64 1704 aa17.15■□□□□ 0.34
RDH13-209ENST00000587721 BRI3BPQ8WY22 251 aa17.14■□□□□ 0.33
RDH13-209ENST00000587721 CEP126Q9P2H0 1117 aa17.14■□□□□ 0.33
RDH13-209ENST00000587721 PDE4DIPQ5VU43 2346 aa17.13■□□□□ 0.33
RDH13-209ENST00000587721 CIAO1O76071 339 aa17.13■□□□□ 0.33
RDH13-209ENST00000587721 RFX5P48382 616 aaPredicted RBP17.13■□□□□ 0.33
RDH13-209ENST00000587721 SNAPC2Q13487 334 aa17.13■□□□□ 0.33
RDH13-209ENST00000587721 CNKSR2Q8WXI2 1034 aa17.13■□□□□ 0.33
RDH13-209ENST00000587721 ZNF341Q9BYN7 854 aa17.13■□□□□ 0.33
RDH13-209ENST00000587721 API5Q9BZZ5 524 aaKnown RBP17.13■□□□□ 0.33
RDH13-209ENST00000587721 ZCCHC17Q9NP64 241 aaKnown RBP17.13■□□□□ 0.33
RDH13-209ENST00000587721 KIF22Q14807 665 aa17.12■□□□□ 0.33
RDH13-209ENST00000587721 ATP2B3Q16720 1220 aa17.12■□□□□ 0.33
RDH13-209ENST00000587721 NBPF11Q86T75 865 aa17.12■□□□□ 0.33
RDH13-209ENST00000587721 FAM151AQ8WW52 585 aa17.12■□□□□ 0.33
RDH13-209ENST00000587721 ARMC5Q96C12 935 aa17.12■□□□□ 0.33
RDH13-209ENST00000587721 TMEM106CQ9BVX2 250 aa17.12■□□□□ 0.33
RDH13-209ENST00000587721 RPAP1Q9BWH6 1393 aaPredicted RBP17.12■□□□□ 0.33
RDH13-209ENST00000587721 LAMB1P07942 1786 aa17.12■□□□□ 0.33
RDH13-209ENST00000587721 SEMA3EO15041 775 aa17.11■□□□□ 0.33
RDH13-209ENST00000587721 LDHBP07195 334 aaKnown RBP17.11■□□□□ 0.33
RDH13-209ENST00000587721 IL15P40933 162 aaPredicted RBP17.11■□□□□ 0.33
RDH13-209ENST00000587721 PPATQ06203 517 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms