RNA–Protein interactions for RNA: ENST00000587629.5

SDF2-205, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 775 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-205ENST00000587629 GRIK5Q16478 980 aa8.1□□□□□ -1.11
SDF2-205ENST00000587629 PKN2Q16513 984 aaKnown RBP8.1□□□□□ -1.11
SDF2-205ENST00000587629 SUPT20HL1Q3ZLR7 823 aa8.1□□□□□ -1.11
SDF2-205ENST00000587629 IFNL1Q8IU54 200 aa8.1□□□□□ -1.11
SDF2-205ENST00000587629 TDRD7Q8NHU6 1098 aaKnown RBP8.1□□□□□ -1.11
SDF2-205ENST00000587629 KAZALD1Q96I82 304 aa8.1□□□□□ -1.11
SDF2-205ENST00000587629 WNK4Q96J92 1243 aa8.1□□□□□ -1.11
SDF2-205ENST00000587629 FAM84BQ96KN1 310 aaPredicted RBP8.1□□□□□ -1.11
SDF2-205ENST00000587629 PCDH10Q9P2E7 1040 aa8.1□□□□□ -1.11
SDF2-205ENST00000587629 MANSC4A6NHS7 340 aaPredicted RBP8.09□□□□□ -1.11
SDF2-205ENST00000587629 IGF2BP3O00425 579 aaKnown RBP eCLIP8.09□□□□□ -1.11
SDF2-205ENST00000587629 FRAT2O75474 233 aaPredicted RBP8.09□□□□□ -1.11
SDF2-205ENST00000587629 SLC34A2O95436 690 aa8.09□□□□□ -1.11
SDF2-205ENST00000587629 GJA5P36382 358 aa8.09□□□□□ -1.11
SDF2-205ENST00000587629 IREB2P48200 963 aaKnown RBP8.09□□□□□ -1.11
SDF2-205ENST00000587629 FKBP1AP62942 108 aaKnown RBP8.09□□□□□ -1.11
SDF2-205ENST00000587629 UBE4AQ14139 1066 aa8.09□□□□□ -1.11
SDF2-205ENST00000587629 MAP3K11Q16584 847 aa8.09□□□□□ -1.11
SDF2-205ENST00000587629 LRRC24Q50LG9 513 aa8.09□□□□□ -1.11
SDF2-205ENST00000587629 FBXO46Q6PJ61 603 aaPredicted RBP8.09□□□□□ -1.11
SDF2-205ENST00000587629 VPS37DQ86XT2 251 aa8.09□□□□□ -1.11
SDF2-205ENST00000587629 CDAN1Q8IWY9 1227 aa8.09□□□□□ -1.11
SDF2-205ENST00000587629 KLHDC4Q8TBB5 520 aa8.09□□□□□ -1.11
SDF2-205ENST00000587629 BICC1Q9H694 974 aaKnown RBP8.09□□□□□ -1.11
SDF2-205ENST00000587629 ELP3Q9H9T3 547 aa8.09□□□□□ -1.11
SDF2-205ENST00000587629 ZNF70Q9UC06 446 aaPredicted RBP8.09□□□□□ -1.11
SDF2-205ENST00000587629 PPP2R3BQ9Y5P8 575 aa8.09□□□□□ -1.11
SDF2-205ENST00000587629 FAM205AQ6ZU69 1335 aa8.08□□□□□ -1.12
SDF2-205ENST00000587629 COL1A1P02452 1464 aaPredicted RBP8.08□□□□□ -1.12
SDF2-205ENST00000587629 ALDH1A1P00352 501 aa8.08□□□□□ -1.12
SDF2-205ENST00000587629 ZBTB48P10074 688 aaPredicted RBP8.08□□□□□ -1.12
SDF2-205ENST00000587629 CRKP46108 304 aa8.08□□□□□ -1.12
SDF2-205ENST00000587629 CACNB3P54284 484 aa8.08□□□□□ -1.12
SDF2-205ENST00000587629 INHBEP58166 350 aa8.08□□□□□ -1.12
SDF2-205ENST00000587629 METTL24Q5JXM2 366 aa8.08□□□□□ -1.12
SDF2-205ENST00000587629 DZIP1LQ8IYY4 767 aaKnown RBP8.08□□□□□ -1.12
SDF2-205ENST00000587629 MRPL50Q8N5N7 158 aaKnown RBP8.08□□□□□ -1.12
SDF2-205ENST00000587629 TMEM39BQ9GZU3 492 aa8.08□□□□□ -1.12
SDF2-205ENST00000587629 SERPINA10Q9UK55 444 aa8.08□□□□□ -1.12
SDF2-205ENST00000587629 RIPOR2Q9Y4F9 1068 aa8.08□□□□□ -1.12
SDF2-205ENST00000587629 TRIM17Q9Y577 477 aa8.08□□□□□ -1.12
SDF2-205ENST00000587629 MROH5Q6ZUA9 1318 aa8.07□□□□□ -1.12
SDF2-205ENST00000587629 BCAMP50895 628 aa8.07□□□□□ -1.12
SDF2-205ENST00000587629 CRHR2Q13324 411 aa8.07□□□□□ -1.12
SDF2-205ENST00000587629 TNFAIP1Q13829 316 aa8.07□□□□□ -1.12
SDF2-205ENST00000587629 NOM1Q5C9Z4 860 aaKnown RBP8.07□□□□□ -1.12
SDF2-205ENST00000587629 OTOP1Q7RTM1 612 aa8.07□□□□□ -1.12
SDF2-205ENST00000587629 FBXO33Q7Z6M2 555 aa8.07□□□□□ -1.12
SDF2-205ENST00000587629 ANKRD13AQ8IZ07 590 aa8.07□□□□□ -1.12
SDF2-205ENST00000587629 ANKRD44Q8N8A2 993 aa8.07□□□□□ -1.12
SDF2-205ENST00000587629 CD99L2Q8TCZ2 262 aa8.07□□□□□ -1.12
SDF2-205ENST00000587629 OPTNQ96CV9 577 aa8.07□□□□□ -1.12
SDF2-205ENST00000587629 TEPSINQ96N21 525 aa8.07□□□□□ -1.12
SDF2-205ENST00000587629 PTPN18Q99952 460 aa8.07□□□□□ -1.12
SDF2-205ENST00000587629 CFHR5Q9BXR6 569 aa8.07□□□□□ -1.12
SDF2-205ENST00000587629 A0A1B0GUL6 1792 aa8.07□□□□□ -1.12
SDF2-205ENST00000587629 PDE8BO95263 885 aa8.06□□□□□ -1.12
SDF2-205ENST00000587629 ZEB1P37275 1124 aaPredicted RBP8.06□□□□□ -1.12
SDF2-205ENST00000587629 CAVIN4Q5BKX8 364 aa8.06□□□□□ -1.12
SDF2-205ENST00000587629 OTUD7BQ6GQQ9 843 aa8.06□□□□□ -1.12
SDF2-205ENST00000587629 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.06□□□□□ -1.12
SDF2-205ENST00000587629 SSH1Q8WYL5 1049 aa8.06□□□□□ -1.12
SDF2-205ENST00000587629 CACNA1FO60840 1977 aa8.06□□□□□ -1.12
SDF2-205ENST00000587629 UTYO14607 1347 aa8.05□□□□□ -1.12
SDF2-205ENST00000587629 CCL15-CCL14A0A0B4J2E2 113 aa8.05□□□□□ -1.12
SDF2-205ENST00000587629 UNCXA6NJT0 531 aa8.05□□□□□ -1.12
SDF2-205ENST00000587629 ECM2O94769 699 aaPredicted RBP8.05□□□□□ -1.12
SDF2-205ENST00000587629 TNNI2P48788 182 aa8.05□□□□□ -1.12
SDF2-205ENST00000587629 MAP3K9P80192 1104 aa8.05□□□□□ -1.12
SDF2-205ENST00000587629 CAP1Q01518 475 aa8.05□□□□□ -1.12
SDF2-205ENST00000587629 VGLL4Q14135 290 aa8.05□□□□□ -1.12
SDF2-205ENST00000587629 CCL15Q16663 113 aa8.05□□□□□ -1.12
SDF2-205ENST00000587629 RABL6Q3YEC7 729 aaPredicted RBP8.05□□□□□ -1.12
SDF2-205ENST00000587629 VGLL2Q8N8G2 317 aa8.05□□□□□ -1.12
SDF2-205ENST00000587629 BRI3BPQ8WY22 251 aa8.05□□□□□ -1.12
SDF2-205ENST00000587629 TEKT1Q969V4 418 aa8.05□□□□□ -1.12
SDF2-205ENST00000587629 ERO1AQ96HE7 468 aa8.05□□□□□ -1.12
SDF2-205ENST00000587629 MS4A4AQ96JQ5 239 aa8.05□□□□□ -1.12
SDF2-205ENST00000587629 USP44Q9H0E7 712 aa8.05□□□□□ -1.12
SDF2-205ENST00000587629 CSADQ9Y600 493 aa8.05□□□□□ -1.12
SDF2-205ENST00000587629 ZNF521Q96K83 1311 aa8.04□□□□□ -1.12
SDF2-205ENST00000587629 POTEFA5A3E0 1075 aa8.04□□□□□ -1.12
SDF2-205ENST00000587629 MYCP01106 439 aaPredicted RBP8.04□□□□□ -1.12
SDF2-205ENST00000587629 SP3Q02447 781 aa8.04□□□□□ -1.12
SDF2-205ENST00000587629 PRPF38BQ5VTL8 546 aaKnown RBP8.04□□□□□ -1.12
SDF2-205ENST00000587629 MIGA2Q7L4E1 593 aa8.04□□□□□ -1.12
SDF2-205ENST00000587629 FAM43AQ8N2R8 423 aa8.04□□□□□ -1.12
SDF2-205ENST00000587629 TBC1D22AQ8WUA7 517 aa8.04□□□□□ -1.12
SDF2-205ENST00000587629 ZKSCAN4Q969J2 545 aaPredicted RBP8.04□□□□□ -1.12
SDF2-205ENST00000587629 CDCA7LQ96GN5 454 aa8.04□□□□□ -1.12
SDF2-205ENST00000587629 PHF12Q96QT6 1004 aa8.04□□□□□ -1.12
SDF2-205ENST00000587629 SIL1Q9H173 461 aa8.04□□□□□ -1.12
SDF2-205ENST00000587629 EFCC1Q9HA90 598 aa8.04□□□□□ -1.12
SDF2-205ENST00000587629 PTPN22Q9Y2R2 807 aa8.04□□□□□ -1.12
SDF2-205ENST00000587629 PTPRCP08575 1304 aa8.03□□□□□ -1.12
SDF2-205ENST00000587629 ECM29Q5VYK3 1845 aa8.03□□□□□ -1.12
SDF2-205ENST00000587629 TESPA1A2RU30 521 aaPredicted RBP8.03□□□□□ -1.12
SDF2-205ENST00000587629 E9PSI1 815 aa8.03□□□□□ -1.12
SDF2-205ENST00000587629 IFIT1P09914 478 aaKnown RBP8.03□□□□□ -1.12
SDF2-205ENST00000587629 GTF2A2P52657 109 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms