RNA–Protein interactions for RNA: ENST00000587480.1

TMC6-208, Transcript of transmembrane channel like 6, human

Gene TMC6, Length 253 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMC6-208	ENST00000587480	DBNL	Q9UJU6	430 aa	Known RBP	28.9	■■■□□ 2.22
TMC6-208	ENST00000587480	MYO1B	O43795	1136 aa		28.89	■■■□□ 2.22
TMC6-208	ENST00000587480	HHIPL2	Q6UWX4	724 aa		28.89	■■■□□ 2.22
TMC6-208	ENST00000587480	TEKT1	Q969V4	418 aa		28.89	■■■□□ 2.22
TMC6-208	ENST00000587480	PRMT6	Q96LA8	375 aa	Predicted RBP	28.89	■■■□□ 2.22
TMC6-208	ENST00000587480	ZDHHC15	Q96MV8	337 aa		28.89	■■■□□ 2.22
TMC6-208	ENST00000587480	HMG20B	Q9P0W2	317 aa		28.89	■■■□□ 2.22
TMC6-208	ENST00000587480	CCDC158	Q5M9N0	1113 aa		28.88	■■■□□ 2.21
TMC6-208	ENST00000587480	PCDHAC2	Q9Y5I4	1007 aa		28.88	■■■□□ 2.21
TMC6-208	ENST00000587480	AKAP11	Q9UKA4	1901 aa		28.88	■■■□□ 2.21
TMC6-208	ENST00000587480	CELF2	O95319	508 aa	Known RBP	28.87	■■■□□ 2.21
TMC6-208	ENST00000587480	LDHB	P07195	334 aa	Known RBP	28.87	■■■□□ 2.21
TMC6-208	ENST00000587480	PRDX5	P30044	214 aa		28.87	■■■□□ 2.21
TMC6-208	ENST00000587480	SPATA5	Q8NB90	893 aa		28.87	■■■□□ 2.21
TMC6-208	ENST00000587480	KLRG1	Q96E93	195 aa		28.87	■■■□□ 2.21
TMC6-208	ENST00000587480	CNTNAP1	P78357	1384 aa		28.87	■■■□□ 2.21
TMC6-208	ENST00000587480	RASSF10	A6NK89	507 aa		28.86	■■■□□ 2.21
TMC6-208	ENST00000587480	MCAM	P43121	646 aa		28.86	■■■□□ 2.21
TMC6-208	ENST00000587480	SPDYE2	Q495Y8	402 aa		28.86	■■■□□ 2.21
TMC6-208	ENST00000587480	PCDHB15	Q9Y5E8	787 aa		28.86	■■■□□ 2.21
TMC6-208	ENST00000587480	PPP2R3B	Q9Y5P8	575 aa		28.86	■■■□□ 2.21
TMC6-208	ENST00000587480	TLL2	Q9Y6L7	1015 aa		28.86	■■■□□ 2.21
TMC6-208	ENST00000587480	IGSF3	O75054	1194 aa		28.85	■■■□□ 2.21
TMC6-208	ENST00000587480	RBM5	P52756	815 aa	Known RBP eCLIP	28.85	■■■□□ 2.21
TMC6-208	ENST00000587480	SPTY2D1	Q68D10	685 aa	Predicted RBP	28.85	■■■□□ 2.21
TMC6-208	ENST00000587480	CLASRP	Q8N2M8	674 aa	Known RBP	28.85	■■■□□ 2.21
TMC6-208	ENST00000587480	CDCA5	Q96FF9	252 aa		28.85	■■■□□ 2.21
TMC6-208	ENST00000587480	DCTPP1	Q9H773	170 aa		28.85	■■■□□ 2.21
TMC6-208	ENST00000587480	TLR7	Q9NYK1	1049 aa	Known RBP	28.85	■■■□□ 2.21
TMC6-208	ENST00000587480	TTC39A	Q5SRH9	613 aa		28.84	■■■□□ 2.21
TMC6-208	ENST00000587480	AACS	Q86V21	672 aa		28.84	■■■□□ 2.21
TMC6-208	ENST00000587480	HHIPL1	Q96JK4	782 aa		28.84	■■■□□ 2.21
TMC6-208	ENST00000587480	CCDC8	Q9H0W5	538 aa	Predicted RBP	28.84	■■■□□ 2.21
TMC6-208	ENST00000587480	AOX1	Q06278	1338 aa		28.84	■■■□□ 2.21
TMC6-208	ENST00000587480	IL1RAPL2	Q9NP60	686 aa		28.83	■■■□□ 2.21
TMC6-208	ENST00000587480	APOBEC3H	Q6NTF7	200 aa	Known RBP	28.82	■■■□□ 2.2
TMC6-208	ENST00000587480	DLK2	Q6UY11	383 aa		28.82	■■■□□ 2.2
TMC6-208	ENST00000587480	SAPCD2	Q86UD0	394 aa		28.82	■■■□□ 2.2
TMC6-208	ENST00000587480	ZNF70	Q9UC06	446 aa	Predicted RBP	28.82	■■■□□ 2.2
TMC6-208	ENST00000587480	PAPPA2	Q9BXP8	1791 aa		28.81	■■■□□ 2.2
TMC6-208	ENST00000587480	GAK	O14976	1311 aa		28.81	■■■□□ 2.2
TMC6-208	ENST00000587480	FKBP1B	P68106	108 aa		28.81	■■■□□ 2.2
TMC6-208	ENST00000587480	TNFAIP1	Q13829	316 aa		28.81	■■■□□ 2.2
TMC6-208	ENST00000587480	FKBP1C	Q5VVH2	108 aa		28.81	■■■□□ 2.2
TMC6-208	ENST00000587480	PI16	Q6UXB8	463 aa		28.81	■■■□□ 2.2
TMC6-208	ENST00000587480	FAM163A	Q96GL9	167 aa	Predicted RBP	28.81	■■■□□ 2.2
TMC6-208	ENST00000587480	LRRCC1	Q9C099	1032 aa		28.81	■■■□□ 2.2
TMC6-208	ENST00000587480	CLRN2	A0PK11	232 aa		28.8	■■■□□ 2.2
TMC6-208	ENST00000587480	JMY	Q8N9B5	988 aa		28.8	■■■□□ 2.2
TMC6-208	ENST00000587480	DEFB129	Q9H1M3	183 aa		28.8	■■■□□ 2.2
TMC6-208	ENST00000587480	GBA2	Q9HCG7	927 aa	Predicted RBP	28.8	■■■□□ 2.2
TMC6-208	ENST00000587480	ABT1	Q9ULW3	272 aa	Known RBP	28.8	■■■□□ 2.2
TMC6-208	ENST00000587480	DAGLA	Q9Y4D2	1042 aa		28.8	■■■□□ 2.2
TMC6-208	ENST00000587480	SUPT16H	Q9Y5B9	1047 aa	Known RBP	28.8	■■■□□ 2.2
TMC6-208	ENST00000587480	MYH2	Q9UKX2	1941 aa		28.79	■■■□□ 2.2
TMC6-208	ENST00000587480	SLF2	Q8IX21	1173 aa		28.79	■■■□□ 2.2
TMC6-208	ENST00000587480	TDRD3	Q9H7E2	651 aa	Known RBP	28.79	■■■□□ 2.2
TMC6-208	ENST00000587480	ZNF408	Q9H9D4	720 aa		28.79	■■■□□ 2.2
TMC6-208	ENST00000587480	ABCF2	Q9UG63	623 aa		28.79	■■■□□ 2.2
TMC6-208	ENST00000587480	DIXDC1	Q155Q3	683 aa		28.78	■■■□□ 2.2
TMC6-208	ENST00000587480	ERICH6	Q7L0X2	663 aa		28.78	■■■□□ 2.2
TMC6-208	ENST00000587480	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	28.78	■■■□□ 2.2
TMC6-208	ENST00000587480	MAST2	Q6P0Q8	1798 aa		28.78	■■■□□ 2.2
TMC6-208	ENST00000587480	APBB1	O00213	710 aa		28.77	■■■□□ 2.2
TMC6-208	ENST00000587480	DEFB115	Q30KQ5	88 aa		28.77	■■■□□ 2.2
TMC6-208	ENST00000587480	DZIP1	Q86YF9	867 aa	Known RBP	28.77	■■■□□ 2.2
TMC6-208	ENST00000587480	C2orf69	Q8N8R5	385 aa		28.77	■■■□□ 2.2
TMC6-208	ENST00000587480	IFIT2	P09913	472 aa	Known RBP	28.76	■■■□□ 2.19
TMC6-208	ENST00000587480	HDAC1	Q13547	482 aa	Predicted RBP	28.76	■■■□□ 2.19
TMC6-208	ENST00000587480	VEZT	Q9HBM0	779 aa		28.76	■■■□□ 2.19
TMC6-208	ENST00000587480	SCAF8	Q9UPN6	1271 aa	Known RBP	28.76	■■■□□ 2.19
TMC6-208	ENST00000587480	THSD7B	Q9C0I4	1608 aa		28.76	■■■□□ 2.19
TMC6-208	ENST00000587480	CYP2E1	P05181	493 aa	Predicted RBP	28.75	■■■□□ 2.19
TMC6-208	ENST00000587480	NF2	P35240	595 aa		28.75	■■■□□ 2.19
TMC6-208	ENST00000587480	MECOM	Q03112	1051 aa		28.75	■■■□□ 2.19
TMC6-208	ENST00000587480	ZNF384	Q8TF68	577 aa		28.75	■■■□□ 2.19
TMC6-208	ENST00000587480	NSUN4	Q96CB9	384 aa	Known RBP	28.75	■■■□□ 2.19
TMC6-208	ENST00000587480	MKRN1	Q9UHC7	482 aa	Known RBP	28.75	■■■□□ 2.19
TMC6-208	ENST00000587480	RASA3	Q14644	834 aa		28.74	■■■□□ 2.19
TMC6-208	ENST00000587480	TMED8	Q6PL24	325 aa	Predicted RBP	28.74	■■■□□ 2.19
TMC6-208	ENST00000587480	FAM83A	Q86UY5	434 aa		28.74	■■■□□ 2.19
TMC6-208	ENST00000587480	TMOD2	Q9NZR1	351 aa		28.74	■■■□□ 2.19
TMC6-208	ENST00000587480	RPAP1	Q9BWH6	1393 aa	Predicted RBP	28.74	■■■□□ 2.19
TMC6-208	ENST00000587480	MROH7-TTC4	A0A0A0MT08	1334 aa		28.73	■■■□□ 2.19
TMC6-208	ENST00000587480	SSC5D	A1L4H1	1573 aa		28.73	■■■□□ 2.19
TMC6-208	ENST00000587480	ZAP70	P43403	619 aa		28.73	■■■□□ 2.19
TMC6-208	ENST00000587480	TNNI2	P48788	182 aa		28.73	■■■□□ 2.19
TMC6-208	ENST00000587480	GSTO1	P78417	241 aa		28.73	■■■□□ 2.19
TMC6-208	ENST00000587480	TBC1D9	Q6ZT07	1266 aa		28.73	■■■□□ 2.19
TMC6-208	ENST00000587480	SNRK	Q9NRH2	765 aa		28.73	■■■□□ 2.19
TMC6-208	ENST00000587480	PCNT	O95613	3336 aa		28.73	■■■□□ 2.19
TMC6-208	ENST00000587480	DOCK2	Q92608	1830 aa		28.72	■■■□□ 2.19
TMC6-208	ENST00000587480	LRP2BP	Q9P2M1	347 aa		28.72	■■■□□ 2.19
TMC6-208	ENST00000587480	RFX7	Q2KHR2	1363 aa		28.72	■■■□□ 2.19
TMC6-208	ENST00000587480	MAP4K4	O95819	1239 aa	Predicted RBP	28.71	■■■□□ 2.19
TMC6-208	ENST00000587480	LDHC	P07864	332 aa		28.71	■■■□□ 2.19
TMC6-208	ENST00000587480	ECE1	P42892	770 aa		28.71	■■■□□ 2.19
TMC6-208	ENST00000587480	VEGFB	P49765	207 aa		28.71	■■■□□ 2.19
TMC6-208	ENST00000587480	HUNK	P57058	714 aa		28.71	■■■□□ 2.19
TMC6-208	ENST00000587480	SUPT20HL1	Q3ZLR7	823 aa		28.71	■■■□□ 2.19

Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms