RNA–Protein interactions for RNA: ENST00000587290.5

PRKCSH-204, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 780 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-204ENST00000587290 SERPINA10Q9UK55 444 aa19.1■□□□□ 0.65
PRKCSH-204ENST00000587290 CENPFP49454 3210 aa19.09■□□□□ 0.65
PRKCSH-204ENST00000587290 BCAMP50895 628 aa19.09■□□□□ 0.65
PRKCSH-204ENST00000587290 SUPT20HL1Q3ZLR7 823 aa19.09■□□□□ 0.65
PRKCSH-204ENST00000587290 IFNL1Q8IU54 200 aa19.09■□□□□ 0.65
PRKCSH-204ENST00000587290 SMC4Q9NTJ3 1288 aa19.09■□□□□ 0.65
PRKCSH-204ENST00000587290 FRAT2O75474 233 aaPredicted RBP19.08■□□□□ 0.64
PRKCSH-204ENST00000587290 PDE8BO95263 885 aa19.08■□□□□ 0.64
PRKCSH-204ENST00000587290 CNKSR2Q8WXI2 1034 aa19.08■□□□□ 0.64
PRKCSH-204ENST00000587290 TEPSINQ96N21 525 aa19.08■□□□□ 0.64
PRKCSH-204ENST00000587290 ELP3Q9H9T3 547 aa19.08■□□□□ 0.64
PRKCSH-204ENST00000587290 MANSC4A6NHS7 340 aaPredicted RBP19.07■□□□□ 0.64
PRKCSH-204ENST00000587290 FKTNO75072 461 aa19.07■□□□□ 0.64
PRKCSH-204ENST00000587290 ZBTB48P10074 688 aaPredicted RBP19.07■□□□□ 0.64
PRKCSH-204ENST00000587290 IREB2P48200 963 aaKnown RBP19.07■□□□□ 0.64
PRKCSH-204ENST00000587290 RFX5P48382 616 aaPredicted RBP19.06■□□□□ 0.64
PRKCSH-204ENST00000587290 CAVIN4Q5BKX8 364 aa19.06■□□□□ 0.64
PRKCSH-204ENST00000587290 FGFR2P21802 821 aa19.05■□□□□ 0.64
PRKCSH-204ENST00000587290 TNFAIP1Q13829 316 aa19.05■□□□□ 0.64
PRKCSH-204ENST00000587290 ANKRD13AQ8IZ07 590 aa19.05■□□□□ 0.64
PRKCSH-204ENST00000587290 OPTNQ96CV9 577 aa19.05■□□□□ 0.64
PRKCSH-204ENST00000587290 CFHR5Q9BXR6 569 aa19.05■□□□□ 0.64
PRKCSH-204ENST00000587290 SIL1Q9H173 461 aa19.05■□□□□ 0.64
PRKCSH-204ENST00000587290 AK9Q5TCS8 1911 aa19.05■□□□□ 0.64
PRKCSH-204ENST00000587290 PUM3Q15397 648 aaKnown RBP19.04■□□□□ 0.64
PRKCSH-204ENST00000587290 NOM1Q5C9Z4 860 aaKnown RBP19.04■□□□□ 0.64
PRKCSH-204ENST00000587290 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.04■□□□□ 0.64
PRKCSH-204ENST00000587290 PTPN18Q99952 460 aa19.04■□□□□ 0.64
PRKCSH-204ENST00000587290 BRCA2P51587 3418 aa19.03■□□□□ 0.64
PRKCSH-204ENST00000587290 ZSWIM8A7E2V4 1837 aa19.03■□□□□ 0.64
PRKCSH-204ENST00000587290 EYA2O00167 538 aa19.03■□□□□ 0.64
PRKCSH-204ENST00000587290 CRHR2Q13324 411 aa19.03■□□□□ 0.64
PRKCSH-204ENST00000587290 VGLL4Q14135 290 aa19.03■□□□□ 0.64
PRKCSH-204ENST00000587290 PKN2Q16513 984 aaKnown RBP19.03■□□□□ 0.64
PRKCSH-204ENST00000587290 ALDH1L2Q3SY69 923 aa19.03■□□□□ 0.64
PRKCSH-204ENST00000587290 TEKT1Q969V4 418 aa19.03■□□□□ 0.64
PRKCSH-204ENST00000587290 ALDH1A1P00352 501 aa19.02■□□□□ 0.64
PRKCSH-204ENST00000587290 CAP1Q01518 475 aa19.02■□□□□ 0.64
PRKCSH-204ENST00000587290 FBXO46Q6PJ61 603 aaPredicted RBP19.02■□□□□ 0.64
PRKCSH-204ENST00000587290 ATG9AQ7Z3C6 839 aa19.02■□□□□ 0.64
PRKCSH-204ENST00000587290 TRMT2AQ8IZ69 625 aaKnown RBP19.02■□□□□ 0.64
PRKCSH-204ENST00000587290 TBC1D22AQ8WUA7 517 aa19.02■□□□□ 0.64
PRKCSH-204ENST00000587290 NOB1Q9ULX3 412 aaKnown RBP19.02■□□□□ 0.64
PRKCSH-204ENST00000587290 TRIM17Q9Y577 477 aa19.02■□□□□ 0.64
PRKCSH-204ENST00000587290 IFIT1P09914 478 aaKnown RBP19.01■□□□□ 0.63
PRKCSH-204ENST00000587290 UBTFL1P0CB47 393 aaPredicted RBP19.01■□□□□ 0.63
PRKCSH-204ENST00000587290 INHBEP58166 350 aa19.01■□□□□ 0.63
PRKCSH-204ENST00000587290 APOBEC3HQ6NTF7 200 aaKnown RBP19.01■□□□□ 0.63
PRKCSH-204ENST00000587290 CD99L2Q8TCZ2 262 aa19.01■□□□□ 0.63
PRKCSH-204ENST00000587290 PA2G4Q9UQ80 394 aaKnown RBP19.01■□□□□ 0.63
PRKCSH-204ENST00000587290 MKI67P46013 3256 aaKnown RBP19.01■□□□□ 0.63
PRKCSH-204ENST00000587290 SLC5A1P13866 664 aa19■□□□□ 0.63
PRKCSH-204ENST00000587290 TNNI2P48788 182 aa19■□□□□ 0.63
PRKCSH-204ENST00000587290 OTOP1Q7RTM1 612 aa19■□□□□ 0.63
PRKCSH-204ENST00000587290 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19■□□□□ 0.635e-12■■□□□ 14.5
PRKCSH-204ENST00000587290 OTUD5Q96G74 571 aa19■□□□□ 0.63
PRKCSH-204ENST00000587290 ZDHHC15Q96MV8 337 aa19■□□□□ 0.63
PRKCSH-204ENST00000587290 LRRFIP2Q9Y608 721 aaKnown RBP19■□□□□ 0.63
PRKCSH-204ENST00000587290 UNCXA6NJT0 531 aa18.99■□□□□ 0.63
PRKCSH-204ENST00000587290 HDLBPQ00341 1268 aaKnown RBP18.99■□□□□ 0.63
PRKCSH-204ENST00000587290 DIXDC1Q155Q3 683 aa18.99■□□□□ 0.63
PRKCSH-204ENST00000587290 BRI3BPQ8WY22 251 aa18.99■□□□□ 0.63
PRKCSH-204ENST00000587290 LPIN2Q92539 896 aa18.99■□□□□ 0.63
PRKCSH-204ENST00000587290 MS4A4AQ96JQ5 239 aa18.99■□□□□ 0.63
PRKCSH-204ENST00000587290 MEIS3Q99687 375 aa18.99■□□□□ 0.63
PRKCSH-204ENST00000587290 MYH2Q9UKX2 1941 aa18.99■□□□□ 0.63
PRKCSH-204ENST00000587290 KIF16BQ96L93 1317 aa18.99■□□□□ 0.63
PRKCSH-204ENST00000587290 MAP3K9P80192 1104 aa18.98■□□□□ 0.63
PRKCSH-204ENST00000587290 KIAA0100Q14667 2235 aaKnown RBP18.98■□□□□ 0.63
PRKCSH-204ENST00000587290 CCL15-CCL14A0A0B4J2E2 113 aa18.97■□□□□ 0.63
PRKCSH-204ENST00000587290 TESPA1A2RU30 521 aaPredicted RBP18.97■□□□□ 0.63
PRKCSH-204ENST00000587290 PRDX5P30044 214 aa18.97■□□□□ 0.63
PRKCSH-204ENST00000587290 CCL15Q16663 113 aa18.97■□□□□ 0.63
PRKCSH-204ENST00000587290 ATP2B3Q16720 1220 aa18.97■□□□□ 0.63
PRKCSH-204ENST00000587290 ZKSCAN4Q969J2 545 aaPredicted RBP18.97■□□□□ 0.63
PRKCSH-204ENST00000587290 WRNIP1Q96S55 665 aa18.97■□□□□ 0.63
PRKCSH-204ENST00000587290 TMOD2Q9NZR1 351 aa18.97■□□□□ 0.63
PRKCSH-204ENST00000587290 CSADQ9Y600 493 aa18.97■□□□□ 0.63
PRKCSH-204ENST00000587290 SNCAIPQ9Y6H5 919 aa18.97■□□□□ 0.63
PRKCSH-204ENST00000587290 ADORA1P30542 326 aa18.96■□□□□ 0.63
PRKCSH-204ENST00000587290 PHKA1P46020 1223 aa18.96■□□□□ 0.63
PRKCSH-204ENST00000587290 MIGA2Q7L4E1 593 aa18.96■□□□□ 0.63
PRKCSH-204ENST00000587290 FAM43AQ8N2R8 423 aa18.96■□□□□ 0.63
PRKCSH-204ENST00000587290 DAGLAQ9Y4D2 1042 aa18.96■□□□□ 0.63
PRKCSH-204ENST00000587290 MAST3O60307 1309 aa18.96■□□□□ 0.63
PRKCSH-204ENST00000587290 DOCK2Q92608 1830 aa18.95■□□□□ 0.62
PRKCSH-204ENST00000587290 TCP10Q12799 353 aa18.95■□□□□ 0.62
PRKCSH-204ENST00000587290 OTUD7BQ6GQQ9 843 aa18.95■□□□□ 0.62
PRKCSH-204ENST00000587290 WDR66Q8TBY9 1149 aa18.95■□□□□ 0.62
PRKCSH-204ENST00000587290 TNNQ9UQP3 1299 aa18.95■□□□□ 0.62
PRKCSH-204ENST00000587290 SPDYE5A6NIY4 337 aa18.94■□□□□ 0.62
PRKCSH-204ENST00000587290 RARSP54136 660 aaKnown RBP18.94■□□□□ 0.62
PRKCSH-204ENST00000587290 NFIAQ12857 509 aa18.94■□□□□ 0.62
PRKCSH-204ENST00000587290 TAF1CQ15572 869 aaPredicted RBP18.94■□□□□ 0.62
PRKCSH-204ENST00000587290 HHIPL2Q6UWX4 724 aa18.94■□□□□ 0.62
PRKCSH-204ENST00000587290 FAM83AQ86UY5 434 aa18.94■□□□□ 0.62
PRKCSH-204ENST00000587290 ERO1AQ96HE7 468 aa18.94■□□□□ 0.62
PRKCSH-204ENST00000587290 CEP126Q9P2H0 1117 aa18.94■□□□□ 0.62
PRKCSH-204ENST00000587290 SUGT1Q9Y2Z0 365 aa18.94■□□□□ 0.62
PRKCSH-204ENST00000587290 RBBP6Q7Z6E9 1792 aaKnown RBP18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms