RNA–Protein interactions for RNA: ENST00000586892.1

SMARCA4-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 4

Gene SMARCA4, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-210ENST00000586892 CDCA5Q96FF9 252 aa16.38■□□□□ 0.21
SMARCA4-210ENST00000586892 PRMT6Q96LA8 375 aaPredicted RBP16.38■□□□□ 0.21
SMARCA4-210ENST00000586892 MRIQ9BWK5 157 aa16.38■□□□□ 0.21
SMARCA4-210ENST00000586892 FPGT-TNNI3KV9GXZ4 949 aa16.38■□□□□ 0.21
SMARCA4-210ENST00000586892 RASGRF1Q13972 1273 aa16.37■□□□□ 0.21
SMARCA4-210ENST00000586892 ZGPATQ8N5A5 531 aaKnown RBP16.37■□□□□ 0.21
SMARCA4-210ENST00000586892 C2orf69Q8N8R5 385 aa16.37■□□□□ 0.21
SMARCA4-210ENST00000586892 HHIPL1Q96JK4 782 aa16.37■□□□□ 0.21
SMARCA4-210ENST00000586892 EXOC6BQ9Y2D4 811 aa16.37■□□□□ 0.21
SMARCA4-210ENST00000586892 PCDHAC2Q9Y5I4 1007 aa16.37■□□□□ 0.21
SMARCA4-210ENST00000586892 ARID4AP29374 1257 aaPredicted RBP16.36■□□□□ 0.21
SMARCA4-210ENST00000586892 SIRT2Q8IXJ6 389 aa16.36■□□□□ 0.21
SMARCA4-210ENST00000586892 GBA2Q9HCG7 927 aaPredicted RBP16.36■□□□□ 0.21
SMARCA4-210ENST00000586892 SCAF8Q9UPN6 1271 aaKnown RBP16.36■□□□□ 0.21
SMARCA4-210ENST00000586892 PPP2R3BQ9Y5P8 575 aa16.36■□□□□ 0.21
SMARCA4-210ENST00000586892 CLRN2A0PK11 232 aa16.35■□□□□ 0.21
SMARCA4-210ENST00000586892 LDHBP07195 334 aaKnown RBP16.35■□□□□ 0.21
SMARCA4-210ENST00000586892 UQCRFS1P1P0C7P4 283 aa16.35■□□□□ 0.21
SMARCA4-210ENST00000586892 VEGFBP49765 207 aa16.35■□□□□ 0.21
SMARCA4-210ENST00000586892 FKBP1BP68106 108 aa16.35■□□□□ 0.21
SMARCA4-210ENST00000586892 HHIPL2Q6UWX4 724 aa16.35■□□□□ 0.21
SMARCA4-210ENST00000586892 ZDHHC15Q96MV8 337 aa16.35■□□□□ 0.21
SMARCA4-210ENST00000586892 DEFB129Q9H1M3 183 aa16.35■□□□□ 0.21
SMARCA4-210ENST00000586892 PAPPA2Q9BXP8 1791 aa16.35■□□□□ 0.21
SMARCA4-210ENST00000586892 PRDX5P30044 214 aa16.34■□□□□ 0.21
SMARCA4-210ENST00000586892 NF2P35240 595 aa16.34■□□□□ 0.21
SMARCA4-210ENST00000586892 ECE1P42892 770 aa16.34■□□□□ 0.21
SMARCA4-210ENST00000586892 HUNKP57058 714 aa16.34■□□□□ 0.21
SMARCA4-210ENST00000586892 TNFAIP1Q13829 316 aa16.34■□□□□ 0.21
SMARCA4-210ENST00000586892 SPDYE2Q495Y8 402 aa16.34■□□□□ 0.21
SMARCA4-210ENST00000586892 CCDC158Q5M9N0 1113 aa16.34■□□□□ 0.21
SMARCA4-210ENST00000586892 VEZTQ9HBM0 779 aa16.34■□□□□ 0.21
SMARCA4-210ENST00000586892 TTC39AQ5SRH9 613 aa16.33■□□□□ 0.2
SMARCA4-210ENST00000586892 SPTY2D1Q68D10 685 aaPredicted RBP16.33■□□□□ 0.2
SMARCA4-210ENST00000586892 PAXIP1Q6ZW49 1069 aaPredicted RBP16.33■□□□□ 0.2
SMARCA4-210ENST00000586892 SPATA5Q8NB90 893 aa16.33■□□□□ 0.2
SMARCA4-210ENST00000586892 RHPN1Q8TCX5 695 aa16.33■□□□□ 0.2
SMARCA4-210ENST00000586892 DBNDD2Q9BQY9 259 aa16.33■□□□□ 0.2
SMARCA4-210ENST00000586892 TDRD3Q9H7E2 651 aaKnown RBP16.33■□□□□ 0.2
SMARCA4-210ENST00000586892 HMG20BQ9P0W2 317 aa16.33■□□□□ 0.2
SMARCA4-210ENST00000586892 ZNF70Q9UC06 446 aaPredicted RBP16.33■□□□□ 0.2
SMARCA4-210ENST00000586892 AOX1Q06278 1338 aa16.33■□□□□ 0.2
SMARCA4-210ENST00000586892 WDR33Q9C0J8 1336 aaKnown RBP16.33■□□□□ 0.2
SMARCA4-210ENST00000586892 MYH2Q9UKX2 1941 aa16.33■□□□□ 0.2
SMARCA4-210ENST00000586892 RAB11FIP3O75154 756 aa16.32■□□□□ 0.2
SMARCA4-210ENST00000586892 MCAMP43121 646 aa16.32■□□□□ 0.2
SMARCA4-210ENST00000586892 PRAMEF18Q5VWM3 479 aa16.32■□□□□ 0.2
SMARCA4-210ENST00000586892 EAF2Q96CJ1 260 aaPredicted RBP16.32■□□□□ 0.2
SMARCA4-210ENST00000586892 KIF1BPQ96EK5 621 aa16.32■□□□□ 0.2
SMARCA4-210ENST00000586892 ZNF512BQ96KM6 892 aaPredicted RBP16.32■□□□□ 0.2
SMARCA4-210ENST00000586892 CAPNS2Q96L46 248 aa16.32■□□□□ 0.2
SMARCA4-210ENST00000586892 ABCF2Q9UG63 623 aa16.32■□□□□ 0.2
SMARCA4-210ENST00000586892 DBNLQ9UJU6 430 aaKnown RBP16.32■□□□□ 0.2
SMARCA4-210ENST00000586892 AKAP11Q9UKA4 1901 aa16.32■□□□□ 0.2
SMARCA4-210ENST00000586892 THSD7BQ9C0I4 1608 aa16.31■□□□□ 0.2
SMARCA4-210ENST00000586892 TNNI2P48788 182 aa16.31■□□□□ 0.2
SMARCA4-210ENST00000586892 CYP4F22Q6NT55 531 aa16.31■□□□□ 0.2
SMARCA4-210ENST00000586892 APOBEC3HQ6NTF7 200 aaKnown RBP16.31■□□□□ 0.2
SMARCA4-210ENST00000586892 DZIP1Q86YF9 867 aaKnown RBP16.31■□□□□ 0.2
SMARCA4-210ENST00000586892 SLF2Q8IX21 1173 aa16.31■□□□□ 0.2
SMARCA4-210ENST00000586892 CCDC8Q9H0W5 538 aaPredicted RBP16.31■□□□□ 0.2
SMARCA4-210ENST00000586892 TMOD2Q9NZR1 351 aa16.31■□□□□ 0.2
SMARCA4-210ENST00000586892 RASA3Q14644 834 aa16.3■□□□□ 0.2
SMARCA4-210ENST00000586892 DIXDC1Q155Q3 683 aa16.3■□□□□ 0.2
SMARCA4-210ENST00000586892 SUPT20HL1Q3ZLR7 823 aa16.3■□□□□ 0.2
SMARCA4-210ENST00000586892 FKBP1CQ5VVH2 108 aa16.3■□□□□ 0.2
SMARCA4-210ENST00000586892 PI16Q6UXB8 463 aa16.3■□□□□ 0.2
SMARCA4-210ENST00000586892 ERICH6Q7L0X2 663 aa16.3■□□□□ 0.2
SMARCA4-210ENST00000586892 AACSQ86V21 672 aa16.3■□□□□ 0.2
SMARCA4-210ENST00000586892 CLASRPQ8N2M8 674 aaKnown RBP16.3■□□□□ 0.2
SMARCA4-210ENST00000586892 TLR7Q9NYK1 1049 aaKnown RBP16.3■□□□□ 0.2
SMARCA4-210ENST00000586892 DAGLAQ9Y4D2 1042 aa16.3■□□□□ 0.2
SMARCA4-210ENST00000586892 APBB1O00213 710 aa16.29■□□□□ 0.2
SMARCA4-210ENST00000586892 GRM1Q13255 1194 aa16.29■□□□□ 0.2
SMARCA4-210ENST00000586892 RGMBQ6NW40 437 aa16.29■□□□□ 0.2
SMARCA4-210ENST00000586892 IL1RAPL2Q9NP60 686 aa16.29■□□□□ 0.2
SMARCA4-210ENST00000586892 GAKO14976 1311 aa16.28■□□□□ 0.2
SMARCA4-210ENST00000586892 TCP10L2B9ZVM9 353 aa16.28■□□□□ 0.2
SMARCA4-210ENST00000586892 MAP2K2P36507 400 aa16.28■□□□□ 0.2
SMARCA4-210ENST00000586892 TTLL12Q14166 644 aaPredicted RBP16.28■□□□□ 0.2
SMARCA4-210ENST00000586892 ARMC9Q7Z3E5 817 aa16.28■□□□□ 0.2
SMARCA4-210ENST00000586892 FAM83AQ86UY5 434 aa16.28■□□□□ 0.2
SMARCA4-210ENST00000586892 CCDC102AQ96A19 550 aa16.28■□□□□ 0.2
SMARCA4-210ENST00000586892 FAM163AQ96GL9 167 aaPredicted RBP16.28■□□□□ 0.2
SMARCA4-210ENST00000586892 SSC5DA1L4H1 1573 aa16.27■□□□□ 0.2
SMARCA4-210ENST00000586892 PPP1R12BO60237 982 aaPredicted RBP16.27■□□□□ 0.2
SMARCA4-210ENST00000586892 IGSF3O75054 1194 aa16.27■□□□□ 0.2
SMARCA4-210ENST00000586892 ZNF157P51786 506 aaPredicted RBP16.27■□□□□ 0.2
SMARCA4-210ENST00000586892 GSTO1P78417 241 aa16.27■□□□□ 0.2
SMARCA4-210ENST00000586892 MAP2K1Q02750 393 aaPredicted RBP16.27■□□□□ 0.2
SMARCA4-210ENST00000586892 MECOMQ03112 1051 aa16.27■□□□□ 0.2
SMARCA4-210ENST00000586892 NOGQ13253 232 aa16.27■□□□□ 0.2
SMARCA4-210ENST00000586892 TBC1D9Q6ZT07 1266 aa16.27■□□□□ 0.2
SMARCA4-210ENST00000586892 CRBNQ96SW2 442 aa16.27■□□□□ 0.2
SMARCA4-210ENST00000586892 LRP2BPQ9P2M1 347 aa16.27■□□□□ 0.2
SMARCA4-210ENST00000586892 MAST2Q6P0Q8 1798 aa16.27■□□□□ 0.2
SMARCA4-210ENST00000586892 MROH7-TTC4A0A0A0MT08 1334 aa16.26■□□□□ 0.19
SMARCA4-210ENST00000586892 IFIT2P09913 472 aaKnown RBP16.26■□□□□ 0.19
SMARCA4-210ENST00000586892 CACNB3P54284 484 aa16.26■□□□□ 0.19
SMARCA4-210ENST00000586892 NBPF12Q5TAG4 269 aaPredicted RBP16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms