RNA–Protein interactions for RNA: ENST00000586568.1

CXXC1-206, Transcript of CXXC finger protein 1, humanhuman

TSL 2

Gene CXXC1, Length 866 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-206ENST00000586568 VGLL2Q8N8G2 317 aa18.5■□□□□ 0.55
CXXC1-206ENST00000586568 MRIQ9BWK5 157 aa18.5■□□□□ 0.55
CXXC1-206ENST00000586568 USP44Q9H0E7 712 aa18.5■□□□□ 0.55
CXXC1-206ENST00000586568 TCP10L2B9ZVM9 353 aa18.49■□□□□ 0.55
CXXC1-206ENST00000586568 CAVIN4Q5BKX8 364 aa18.49■□□□□ 0.55
CXXC1-206ENST00000586568 METTL24Q5JXM2 366 aa18.49■□□□□ 0.55
CXXC1-206ENST00000586568 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.49■□□□□ 0.55
CXXC1-206ENST00000586568 OTOP1Q7RTM1 612 aa18.49■□□□□ 0.55
CXXC1-206ENST00000586568 CDAN1Q8IWY9 1227 aa18.49■□□□□ 0.55
CXXC1-206ENST00000586568 MS4A4AQ96JQ5 239 aa18.49■□□□□ 0.55
CXXC1-206ENST00000586568 TMEM39BQ9GZU3 492 aa18.49■□□□□ 0.55
CXXC1-206ENST00000586568 IQSEC3Q9UPP2 1182 aaPredicted RBP18.49■□□□□ 0.55
CXXC1-206ENST00000586568 PTPRCP08575 1304 aa18.49■□□□□ 0.55
CXXC1-206ENST00000586568 CRHR2Q13324 411 aa18.48■□□□□ 0.55
CXXC1-206ENST00000586568 TBC1D22AQ8WUA7 517 aa18.48■□□□□ 0.55
CXXC1-206ENST00000586568 SSH1Q8WYL5 1049 aa18.48■□□□□ 0.55
CXXC1-206ENST00000586568 ELP3Q9H9T3 547 aa18.48■□□□□ 0.55
CXXC1-206ENST00000586568 TRIM17Q9Y577 477 aa18.48■□□□□ 0.55
CXXC1-206ENST00000586568 TNNI2P48788 182 aa18.47■□□□□ 0.55
CXXC1-206ENST00000586568 BCAMP50895 628 aa18.47■□□□□ 0.55
CXXC1-206ENST00000586568 MAP3K9P80192 1104 aa18.47■□□□□ 0.55
CXXC1-206ENST00000586568 CHAF1AQ13111 956 aaPredicted RBP18.47■□□□□ 0.55
CXXC1-206ENST00000586568 OPTNQ96CV9 577 aa18.47■□□□□ 0.55
CXXC1-206ENST00000586568 HTTP42858 3142 aa18.47■□□□□ 0.55
CXXC1-206ENST00000586568 E9PSI1 815 aa18.46■□□□□ 0.55
CXXC1-206ENST00000586568 FRAT2O75474 233 aaPredicted RBP18.46■□□□□ 0.55
CXXC1-206ENST00000586568 PRPF38BQ5VTL8 546 aaKnown RBP18.46■□□□□ 0.55
CXXC1-206ENST00000586568 KLHDC4Q8TBB5 520 aa18.46■□□□□ 0.55
CXXC1-206ENST00000586568 ERO1AQ96HE7 468 aa18.46■□□□□ 0.55
CXXC1-206ENST00000586568 FGFR2P21802 821 aa18.45■□□□□ 0.54
CXXC1-206ENST00000586568 VGLL4Q14135 290 aa18.45■□□□□ 0.54
CXXC1-206ENST00000586568 INTS3Q68E01 1043 aaKnown RBP18.45■□□□□ 0.54
CXXC1-206ENST00000586568 APOBEC3HQ6NTF7 200 aaKnown RBP18.45■□□□□ 0.54
CXXC1-206ENST00000586568 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.45■□□□□ 0.54
CXXC1-206ENST00000586568 CNKSR2Q8WXI2 1034 aa18.45■□□□□ 0.54
CXXC1-206ENST00000586568 BRI3BPQ8WY22 251 aa18.45■□□□□ 0.54
CXXC1-206ENST00000586568 TEKT1Q969V4 418 aa18.45■□□□□ 0.54
CXXC1-206ENST00000586568 ZDHHC15Q96MV8 337 aa18.45■□□□□ 0.54
CXXC1-206ENST00000586568 PTPN22Q9Y2R2 807 aa18.45■□□□□ 0.54
CXXC1-206ENST00000586568 SUGT1Q9Y2Z0 365 aa18.45■□□□□ 0.54
CXXC1-206ENST00000586568 CACNA1FO60840 1977 aa18.44■□□□□ 0.54
CXXC1-206ENST00000586568 SP3Q02447 781 aa18.44■□□□□ 0.54
CXXC1-206ENST00000586568 SLFN5Q08AF3 891 aa18.44■□□□□ 0.54
CXXC1-206ENST00000586568 FKBP1CQ5VVH2 108 aa18.44■□□□□ 0.54
CXXC1-206ENST00000586568 CD99L2Q8TCZ2 262 aa18.44■□□□□ 0.54
CXXC1-206ENST00000586568 KIF16BQ96L93 1317 aa18.44■□□□□ 0.54
CXXC1-206ENST00000586568 IFIT1P09914 478 aaKnown RBP18.43■□□□□ 0.54
CXXC1-206ENST00000586568 RFX5P48382 616 aaPredicted RBP18.43■□□□□ 0.54
CXXC1-206ENST00000586568 GTF2A2P52657 109 aa18.43■□□□□ 0.54
CXXC1-206ENST00000586568 CACNB3P54284 484 aa18.43■□□□□ 0.54
CXXC1-206ENST00000586568 PUM3Q15397 648 aaKnown RBP18.43■□□□□ 0.54
CXXC1-206ENST00000586568 FAM83AQ86UY5 434 aa18.43■□□□□ 0.54
CXXC1-206ENST00000586568 EFCC1Q9HA90 598 aa18.43■□□□□ 0.54
CXXC1-206ENST00000586568 CSADQ9Y600 493 aa18.43■□□□□ 0.54
CXXC1-206ENST00000586568 EYA2O00167 538 aa18.42■□□□□ 0.54
CXXC1-206ENST00000586568 CAP1Q01518 475 aa18.42■□□□□ 0.54
CXXC1-206ENST00000586568 HHIPL2Q6UWX4 724 aa18.42■□□□□ 0.54
CXXC1-206ENST00000586568 CCL15-CCL14A0A0B4J2E2 113 aa18.41■□□□□ 0.54
CXXC1-206ENST00000586568 SPDYE5A6NIY4 337 aa18.41■□□□□ 0.54
CXXC1-206ENST00000586568 CCL15Q16663 113 aa18.41■□□□□ 0.54
CXXC1-206ENST00000586568 ALDH1L2Q3SY69 923 aa18.41■□□□□ 0.54
CXXC1-206ENST00000586568 ATG9AQ7Z3C6 839 aa18.41■□□□□ 0.54
CXXC1-206ENST00000586568 OTUD5Q96G74 571 aa18.41■□□□□ 0.54
CXXC1-206ENST00000586568 ERO1BQ86YB8 467 aa18.4■□□□□ 0.54
CXXC1-206ENST00000586568 FAM43AQ8N2R8 423 aa18.4■□□□□ 0.54
CXXC1-206ENST00000586568 WDR66Q8TBY9 1149 aa18.4■□□□□ 0.54
CXXC1-206ENST00000586568 LPIN2Q92539 896 aa18.4■□□□□ 0.54
CXXC1-206ENST00000586568 ARMC5Q96C12 935 aa18.4■□□□□ 0.54
CXXC1-206ENST00000586568 HOOK2Q96ED9 719 aa18.4■□□□□ 0.54
CXXC1-206ENST00000586568 ZFYVE28Q9HCC9 887 aa18.4■□□□□ 0.54
CXXC1-206ENST00000586568 TMOD2Q9NZR1 351 aa18.4■□□□□ 0.54
CXXC1-206ENST00000586568 SNCAIPQ9Y6H5 919 aa18.4■□□□□ 0.54
CXXC1-206ENST00000586568 MAST3O60307 1309 aa18.4■□□□□ 0.54
CXXC1-206ENST00000586568 POTEFA5A3E0 1075 aa18.39■□□□□ 0.53
CXXC1-206ENST00000586568 TAF1CQ15572 869 aaPredicted RBP18.39■□□□□ 0.53
CXXC1-206ENST00000586568 ZKSCAN4Q969J2 545 aaPredicted RBP18.39■□□□□ 0.53
CXXC1-206ENST00000586568 CETPP11597 493 aa18.38■□□□□ 0.53
CXXC1-206ENST00000586568 SLC5A1P13866 664 aa18.38■□□□□ 0.53
CXXC1-206ENST00000586568 ARHGEF6Q15052 776 aa18.38■□□□□ 0.53
CXXC1-206ENST00000586568 TRMT2AQ8IZ69 625 aaKnown RBP18.38■□□□□ 0.53
CXXC1-206ENST00000586568 CDCA7LQ96GN5 454 aa18.38■□□□□ 0.53
CXXC1-206ENST00000586568 WRNIP1Q96S55 665 aa18.38■□□□□ 0.53
CXXC1-206ENST00000586568 PCDH10Q9P2E7 1040 aa18.38■□□□□ 0.53
CXXC1-206ENST00000586568 IRF6O14896 467 aa18.37■□□□□ 0.53
CXXC1-206ENST00000586568 FBXO3Q9UK99 471 aa18.37■□□□□ 0.53
CXXC1-206ENST00000586568 BTBD19C9JJ37 291 aa18.36■□□□□ 0.53
CXXC1-206ENST00000586568 CIAO1O76071 339 aa18.36■□□□□ 0.53
CXXC1-206ENST00000586568 SNAPC2Q13487 334 aa18.36■□□□□ 0.53
CXXC1-206ENST00000586568 DCAF15Q66K64 600 aa18.36■□□□□ 0.53
CXXC1-206ENST00000586568 FAM151AQ8WW52 585 aa18.36■□□□□ 0.53
CXXC1-206ENST00000586568 ZCCHC17Q9NP64 241 aaKnown RBP18.36■□□□□ 0.53
CXXC1-206ENST00000586568 SMC4Q9NTJ3 1288 aa18.36■□□□□ 0.53
CXXC1-206ENST00000586568 A0A1B0GUL6 1792 aa18.35■□□□□ 0.53
CXXC1-206ENST00000586568 MKI67P46013 3256 aaKnown RBP18.35■□□□□ 0.53
CXXC1-206ENST00000586568 TLR2O60603 784 aa18.35■□□□□ 0.53
CXXC1-206ENST00000586568 PPIL2Q13356 520 aa18.35■□□□□ 0.53
CXXC1-206ENST00000586568 CDC42EP5Q6NZY7 148 aa18.35■□□□□ 0.53
CXXC1-206ENST00000586568 MIGA2Q7L4E1 593 aa18.35■□□□□ 0.53
CXXC1-206ENST00000586568 CEP126Q9P2H0 1117 aa18.35■□□□□ 0.53
CXXC1-206ENST00000586568 ZNF112Q9UJU3 913 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms