RNA–Protein interactions for RNA: ENST00000586119.1

LIG3-207, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-207ENST00000586119 INHBEP58166 350 aa14.69□□□□□ -0.06
LIG3-207ENST00000586119 CHAF1AQ13111 956 aaPredicted RBP14.69□□□□□ -0.06
LIG3-207ENST00000586119 CRHR2Q13324 411 aa14.69□□□□□ -0.06
LIG3-207ENST00000586119 FBXO33Q7Z6M2 555 aa14.69□□□□□ -0.06
LIG3-207ENST00000586119 MRPL50Q8N5N7 158 aaKnown RBP14.69□□□□□ -0.06
LIG3-207ENST00000586119 ANKRD44Q8N8A2 993 aa14.69□□□□□ -0.06
LIG3-207ENST00000586119 LAMB1P07942 1786 aa14.68□□□□□ -0.06
LIG3-207ENST00000586119 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.68□□□□□ -0.06
LIG3-207ENST00000586119 ANKRD13AQ8IZ07 590 aa14.68□□□□□ -0.06
LIG3-207ENST00000586119 OPTNQ96CV9 577 aa14.68□□□□□ -0.06
LIG3-207ENST00000586119 SERPINA10Q9UK55 444 aa14.68□□□□□ -0.06
LIG3-207ENST00000586119 KIAA0100Q14667 2235 aaKnown RBP14.68□□□□□ -0.06
LIG3-207ENST00000586119 TESPA1A2RU30 521 aaPredicted RBP14.67□□□□□ -0.06
LIG3-207ENST00000586119 BCAMP50895 628 aa14.67□□□□□ -0.06
LIG3-207ENST00000586119 PRPF38BQ5VTL8 546 aaKnown RBP14.67□□□□□ -0.06
LIG3-207ENST00000586119 MS4A4AQ96JQ5 239 aa14.67□□□□□ -0.06
LIG3-207ENST00000586119 UTYO14607 1347 aa14.66□□□□□ -0.06
LIG3-207ENST00000586119 RABL6Q3YEC7 729 aaPredicted RBP14.66□□□□□ -0.06
LIG3-207ENST00000586119 METTL24Q5JXM2 366 aa14.66□□□□□ -0.06
LIG3-207ENST00000586119 VGLL2Q8N8G2 317 aa14.66□□□□□ -0.06
LIG3-207ENST00000586119 BRI3BPQ8WY22 251 aa14.66□□□□□ -0.06
LIG3-207ENST00000586119 PTPN22Q9Y2R2 807 aa14.66□□□□□ -0.06
LIG3-207ENST00000586119 ZNF521Q96K83 1311 aa14.66□□□□□ -0.06
LIG3-207ENST00000586119 UNCXA6NJT0 531 aa14.65□□□□□ -0.06
LIG3-207ENST00000586119 MAP3K9P80192 1104 aa14.65□□□□□ -0.06
LIG3-207ENST00000586119 VGLL4Q14135 290 aa14.65□□□□□ -0.06
LIG3-207ENST00000586119 MROH5Q6ZUA9 1318 aa14.65□□□□□ -0.06
LIG3-207ENST00000586119 ARAP2Q8WZ64 1704 aa14.64□□□□□ -0.07
LIG3-207ENST00000586119 PDE8BO95263 885 aa14.64□□□□□ -0.07
LIG3-207ENST00000586119 SP3Q02447 781 aa14.64□□□□□ -0.07
LIG3-207ENST00000586119 VPS37DQ86XT2 251 aa14.64□□□□□ -0.07
LIG3-207ENST00000586119 FAM43AQ8N2R8 423 aa14.64□□□□□ -0.07
LIG3-207ENST00000586119 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.64□□□□□ -0.07
LIG3-207ENST00000586119 USP44Q9H0E7 712 aa14.64□□□□□ -0.07
LIG3-207ENST00000586119 HTTP42858 3142 aa14.64□□□□□ -0.07
LIG3-207ENST00000586119 ZSWIM8A7E2V4 1837 aa14.64□□□□□ -0.07
LIG3-207ENST00000586119 CENPFP49454 3210 aa14.63□□□□□ -0.07
LIG3-207ENST00000586119 FRAT2O75474 233 aaPredicted RBP14.63□□□□□ -0.07
LIG3-207ENST00000586119 EN2P19622 333 aaPredicted RBP14.63□□□□□ -0.07
LIG3-207ENST00000586119 TNFAIP1Q13829 316 aa14.63□□□□□ -0.07
LIG3-207ENST00000586119 OTUD7BQ6GQQ9 843 aa14.63□□□□□ -0.07
LIG3-207ENST00000586119 SSH1Q8WYL5 1049 aa14.63□□□□□ -0.07
LIG3-207ENST00000586119 ZKSCAN4Q969J2 545 aaPredicted RBP14.63□□□□□ -0.07
LIG3-207ENST00000586119 OTUD5Q96G74 571 aa14.63□□□□□ -0.07
LIG3-207ENST00000586119 ERO1AQ96HE7 468 aa14.63□□□□□ -0.07
LIG3-207ENST00000586119 EFCC1Q9HA90 598 aa14.63□□□□□ -0.07
LIG3-207ENST00000586119 CCL15-CCL14A0A0B4J2E2 113 aa14.62□□□□□ -0.07
LIG3-207ENST00000586119 ECM2O94769 699 aaPredicted RBP14.62□□□□□ -0.07
LIG3-207ENST00000586119 FGFR2P21802 821 aa14.62□□□□□ -0.07
LIG3-207ENST00000586119 RFX5P48382 616 aaPredicted RBP14.62□□□□□ -0.07
LIG3-207ENST00000586119 CCL15Q16663 113 aa14.62□□□□□ -0.07
LIG3-207ENST00000586119 APOBEC3HQ6NTF7 200 aaKnown RBP14.62□□□□□ -0.07
LIG3-207ENST00000586119 MKI67P46013 3256 aaKnown RBP14.61□□□□□ -0.07
LIG3-207ENST00000586119 AK9Q5TCS8 1911 aa14.61□□□□□ -0.07
LIG3-207ENST00000586119 TNNI2P48788 182 aa14.61□□□□□ -0.07
LIG3-207ENST00000586119 TAF1CQ15572 869 aaPredicted RBP14.61□□□□□ -0.07
LIG3-207ENST00000586119 CAVIN4Q5BKX8 364 aa14.61□□□□□ -0.07
LIG3-207ENST00000586119 MIGA2Q7L4E1 593 aa14.61□□□□□ -0.07
LIG3-207ENST00000586119 TEKT1Q969V4 418 aa14.61□□□□□ -0.07
LIG3-207ENST00000586119 CDCA7LQ96GN5 454 aa14.61□□□□□ -0.07
LIG3-207ENST00000586119 ARHGAP39Q9C0H5 1083 aa14.61□□□□□ -0.07
LIG3-207ENST00000586119 SNCAIPQ9Y6H5 919 aa14.61□□□□□ -0.07
LIG3-207ENST00000586119 MYCP01106 439 aaPredicted RBP14.6□□□□□ -0.07
LIG3-207ENST00000586119 HDLBPQ00341 1268 aaKnown RBP14.6□□□□□ -0.07
LIG3-207ENST00000586119 ZDHHC15Q96MV8 337 aa14.6□□□□□ -0.07
LIG3-207ENST00000586119 CSADQ9Y600 493 aa14.6□□□□□ -0.07
LIG3-207ENST00000586119 IRF6O14896 467 aa14.59□□□□□ -0.07
LIG3-207ENST00000586119 GTF2A2P52657 109 aa14.59□□□□□ -0.07
LIG3-207ENST00000586119 ATG9AQ7Z3C6 839 aa14.59□□□□□ -0.07
LIG3-207ENST00000586119 TBC1D22AQ8WUA7 517 aa14.59□□□□□ -0.07
LIG3-207ENST00000586119 ARMC5Q96C12 935 aa14.59□□□□□ -0.07
LIG3-207ENST00000586119 WRNIP1Q96S55 665 aa14.59□□□□□ -0.07
LIG3-207ENST00000586119 ZFYVE28Q9HCC9 887 aa14.59□□□□□ -0.07
LIG3-207ENST00000586119 PTCH2Q9Y6C5 1203 aa14.59□□□□□ -0.07
LIG3-207ENST00000586119 SPDYE5A6NIY4 337 aa14.58□□□□□ -0.08
LIG3-207ENST00000586119 BTBD19C9JJ37 291 aa14.58□□□□□ -0.08
LIG3-207ENST00000586119 EYA2O00167 538 aa14.58□□□□□ -0.08
LIG3-207ENST00000586119 INPP5BP32019 993 aa14.58□□□□□ -0.08
LIG3-207ENST00000586119 SLFN5Q08AF3 891 aa14.58□□□□□ -0.08
LIG3-207ENST00000586119 INTS3Q68E01 1043 aaKnown RBP14.58□□□□□ -0.08
LIG3-207ENST00000586119 MRIQ9BWK5 157 aa14.58□□□□□ -0.08
LIG3-207ENST00000586119 MYH13Q9UKX3 1938 aa14.58□□□□□ -0.08
LIG3-207ENST00000586119 IFIT1P09914 478 aaKnown RBP14.57□□□□□ -0.08
LIG3-207ENST00000586119 TCP10Q12799 353 aa14.57□□□□□ -0.08
LIG3-207ENST00000586119 PUM3Q15397 648 aaKnown RBP14.57□□□□□ -0.08
LIG3-207ENST00000586119 DIXDC1Q155Q3 683 aa14.57□□□□□ -0.08
LIG3-207ENST00000586119 ZFPM1Q8IX07 1006 aa14.57□□□□□ -0.08
LIG3-207ENST00000586119 SIL1Q9H173 461 aa14.57□□□□□ -0.08
LIG3-207ENST00000586119 PTPRCP08575 1304 aa14.57□□□□□ -0.08
LIG3-207ENST00000586119 BRCA2P51587 3418 aa14.57□□□□□ -0.08
LIG3-207ENST00000586119 RBBP6Q7Z6E9 1792 aaKnown RBP14.56□□□□□ -0.08
LIG3-207ENST00000586119 SLURP2P0DP57 97 aa14.56□□□□□ -0.08
LIG3-207ENST00000586119 CTGFP29279 349 aa14.56□□□□□ -0.08
LIG3-207ENST00000586119 NFIAQ12857 509 aa14.56□□□□□ -0.08
LIG3-207ENST00000586119 CDC42EP5Q6NZY7 148 aa14.56□□□□□ -0.08
LIG3-207ENST00000586119 HHIPL2Q6UWX4 724 aa14.56□□□□□ -0.08
LIG3-207ENST00000586119 FAM83AQ86UY5 434 aa14.56□□□□□ -0.08
LIG3-207ENST00000586119 ERO1BQ86YB8 467 aa14.56□□□□□ -0.08
LIG3-207ENST00000586119 ZNF333Q96JL9 665 aa14.56□□□□□ -0.08
LIG3-207ENST00000586119 TMOD2Q9NZR1 351 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms