RNA–Protein interactions for RNA: ENST00000586083.5

RNFT1-208, Transcript of ring finger protein, transmembrane 1, human

TSL 2

Gene RNFT1, Length 1,425 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RNFT1-208	ENST00000586083	SPDYE2	Q495Y8	402 aa		14.77	□□□□□ -0.04
RNFT1-208	ENST00000586083	OTUD7B	Q6GQQ9	843 aa		14.77	□□□□□ -0.04
RNFT1-208	ENST00000586083	TBC1D22A	Q8WUA7	517 aa		14.77	□□□□□ -0.04
RNFT1-208	ENST00000586083	WNK4	Q96J92	1243 aa		14.77	□□□□□ -0.04
RNFT1-208	ENST00000586083	CLMN	Q96JQ2	1002 aa		14.77	□□□□□ -0.04
RNFT1-208	ENST00000586083	ZNF70	Q9UC06	446 aa	Predicted RBP	14.77	□□□□□ -0.04
RNFT1-208	ENST00000586083	HPS5	Q9UPZ3	1129 aa		14.77	□□□□□ -0.04
RNFT1-208	ENST00000586083	SSC5D	A1L4H1	1573 aa		14.77	□□□□□ -0.05
RNFT1-208	ENST00000586083	ECM29	Q5VYK3	1845 aa		14.76	□□□□□ -0.05
RNFT1-208	ENST00000586083	CRK	P46108	304 aa		14.76	□□□□□ -0.05
RNFT1-208	ENST00000586083	CHAF1A	Q13111	956 aa	Predicted RBP	14.76	□□□□□ -0.05
RNFT1-208	ENST00000586083	LRRC24	Q50LG9	513 aa		14.76	□□□□□ -0.05
RNFT1-208	ENST00000586083	IFNL1	Q8IU54	200 aa		14.76	□□□□□ -0.05
RNFT1-208	ENST00000586083	DZIP1L	Q8IYY4	767 aa	Known RBP	14.76	□□□□□ -0.05
RNFT1-208	ENST00000586083	ANKRD44	Q8N8A2	993 aa		14.76	□□□□□ -0.05
RNFT1-208	ENST00000586083	SSH1	Q8WYL5	1049 aa		14.76	□□□□□ -0.05
RNFT1-208	ENST00000586083	TDRD3	Q9H7E2	651 aa	Known RBP	14.76	□□□□□ -0.05
RNFT1-208	ENST00000586083	USP2	O75604	605 aa	Predicted RBP	14.75	□□□□□ -0.05
RNFT1-208	ENST00000586083	IFIT1	P09914	478 aa	Known RBP	14.75	□□□□□ -0.05
RNFT1-208	ENST00000586083	FBXO46	Q6PJ61	603 aa	Predicted RBP	14.75	□□□□□ -0.05
RNFT1-208	ENST00000586083	FBXO33	Q7Z6M2	555 aa		14.75	□□□□□ -0.05
RNFT1-208	ENST00000586083	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	14.75	□□□□□ -0.05
RNFT1-208	ENST00000586083	AOX1	Q06278	1338 aa		14.75	□□□□□ -0.05
RNFT1-208	ENST00000586083	TCP10L2	B9ZVM9	353 aa		14.75	□□□□□ -0.05
RNFT1-208	ENST00000586083	HDLBP	Q00341	1268 aa	Known RBP	14.75	□□□□□ -0.05
RNFT1-208	ENST00000586083	PUM3	Q15397	648 aa	Known RBP	14.75	□□□□□ -0.05
RNFT1-208	ENST00000586083	ALDH1L2	Q3SY69	923 aa		14.75	□□□□□ -0.05
RNFT1-208	ENST00000586083	TEKT1	Q969V4	418 aa		14.75	□□□□□ -0.05
RNFT1-208	ENST00000586083	USP44	Q9H0E7	712 aa		14.75	□□□□□ -0.05
RNFT1-208	ENST00000586083	SLFN5	Q08AF3	891 aa		14.74	□□□□□ -0.05
RNFT1-208	ENST00000586083	SMC4	Q9NTJ3	1288 aa		14.74	□□□□□ -0.05
RNFT1-208	ENST00000586083	TMOD2	Q9NZR1	351 aa		14.74	□□□□□ -0.05
RNFT1-208	ENST00000586083	MAST3	O60307	1309 aa		14.73	□□□□□ -0.05
RNFT1-208	ENST00000586083	BCAM	P50895	628 aa		14.73	□□□□□ -0.05
RNFT1-208	ENST00000586083	VGLL2	Q8N8G2	317 aa		14.73	□□□□□ -0.05
RNFT1-208	ENST00000586083	KLHDC4	Q8TBB5	520 aa		14.73	□□□□□ -0.05
RNFT1-208	ENST00000586083	R3HDML	Q9H3Y0	253 aa		14.73	□□□□□ -0.05
RNFT1-208	ENST00000586083	ELP3	Q9H9T3	547 aa		14.73	□□□□□ -0.05
RNFT1-208	ENST00000586083	KIF16B	Q96L93	1317 aa		14.72	□□□□□ -0.05
RNFT1-208	ENST00000586083	IGF2BP3	O00425	579 aa	Known RBP eCLIP	14.72	□□□□□ -0.05
RNFT1-208	ENST00000586083	SLC5A1	P13866	664 aa		14.72	□□□□□ -0.05
RNFT1-208	ENST00000586083	OPTN	Q96CV9	577 aa		14.72	□□□□□ -0.05
RNFT1-208	ENST00000586083	HOOK2	Q96ED9	719 aa		14.72	□□□□□ -0.05
RNFT1-208	ENST00000586083	TMEM39B	Q9GZU3	492 aa		14.72	□□□□□ -0.05
RNFT1-208	ENST00000586083	FOXD4L1	Q9NU39	408 aa		14.72	□□□□□ -0.05
RNFT1-208	ENST00000586083	HDAC5	Q9UQL6	1122 aa		14.72	□□□□□ -0.05
RNFT1-208	ENST00000586083	SUGT1	Q9Y2Z0	365 aa		14.72	□□□□□ -0.05
RNFT1-208	ENST00000586083	CSAD	Q9Y600	493 aa		14.72	□□□□□ -0.05
RNFT1-208	ENST00000586083	EYA2	O00167	538 aa		14.71	□□□□□ -0.05
RNFT1-208	ENST00000586083	UBTFL1	P0CB47	393 aa	Predicted RBP	14.71	□□□□□ -0.05
RNFT1-208	ENST00000586083	MAP3K9	P80192	1104 aa		14.71	□□□□□ -0.05
RNFT1-208	ENST00000586083	ERO1A	Q96HE7	468 aa		14.71	□□□□□ -0.05
RNFT1-208	ENST00000586083	TEPSIN	Q96N21	525 aa		14.71	□□□□□ -0.05
RNFT1-208	ENST00000586083	MRI	Q9BWK5	157 aa		14.71	□□□□□ -0.05
RNFT1-208	ENST00000586083	TRIM17	Q9Y577	477 aa		14.71	□□□□□ -0.05
RNFT1-208	ENST00000586083	ARAP2	Q8WZ64	1704 aa		14.71	□□□□□ -0.05
RNFT1-208	ENST00000586083	CT47B1	P0C2W7	299 aa	Predicted RBP	14.7	□□□□□ -0.06
RNFT1-208	ENST00000586083	WDR66	Q8TBY9	1149 aa		14.7	□□□□□ -0.06
RNFT1-208	ENST00000586083	LPIN2	Q92539	896 aa		14.7	□□□□□ -0.06
RNFT1-208	ENST00000586083	ZDHHC15	Q96MV8	337 aa		14.7	□□□□□ -0.06
RNFT1-208	ENST00000586083	TESPA1	A2RU30	521 aa	Predicted RBP	14.69	□□□□□ -0.06
RNFT1-208	ENST00000586083	FGFR2	P21802	821 aa		14.69	□□□□□ -0.06
RNFT1-208	ENST00000586083	GJA5	P36382	358 aa		14.69	□□□□□ -0.06
RNFT1-208	ENST00000586083	GTF2A2	P52657	109 aa		14.69	□□□□□ -0.06
RNFT1-208	ENST00000586083	CRHR2	Q13324	411 aa		14.69	□□□□□ -0.06
RNFT1-208	ENST00000586083	VGLL4	Q14135	290 aa		14.69	□□□□□ -0.06
RNFT1-208	ENST00000586083	GRIK5	Q16478	980 aa		14.69	□□□□□ -0.06
RNFT1-208	ENST00000586083	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	14.69	□□□□□ -0.06
RNFT1-208	ENST00000586083	CDCA7L	Q96GN5	454 aa		14.69	□□□□□ -0.06
RNFT1-208	ENST00000586083	FBXO3	Q9UK99	471 aa		14.69	□□□□□ -0.06
RNFT1-208	ENST00000586083	WDHD1	O75717	1129 aa	Predicted RBP	14.68	□□□□□ -0.06
RNFT1-208	ENST00000586083	RFX5	P48382	616 aa	Predicted RBP	14.68	□□□□□ -0.06
RNFT1-208	ENST00000586083	CACNB3	P54284	484 aa		14.68	□□□□□ -0.06
RNFT1-208	ENST00000586083	HHIPL2	Q6UWX4	724 aa		14.68	□□□□□ -0.06
RNFT1-208	ENST00000586083	FAM83A	Q86UY5	434 aa		14.68	□□□□□ -0.06
RNFT1-208	ENST00000586083	CDAN1	Q8IWY9	1227 aa		14.68	□□□□□ -0.06
RNFT1-208	ENST00000586083	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	14.68	□□□□□ -0.06
RNFT1-208	ENST00000586083	API5	Q9BZZ5	524 aa	Known RBP	14.68	□□□□□ -0.06
RNFT1-208	ENST00000586083	GNL3L	Q9NVN8	582 aa	Known RBP	14.68	□□□□□ -0.06
RNFT1-208	ENST00000586083	CCL15-CCL14	A0A0B4J2E2	113 aa		14.67	□□□□□ -0.06
RNFT1-208	ENST00000586083	CIAO1	O76071	339 aa		14.67	□□□□□ -0.06
RNFT1-208	ENST00000586083	SP3	Q02447	781 aa		14.67	□□□□□ -0.06
RNFT1-208	ENST00000586083	ARHGEF6	Q15052	776 aa		14.67	□□□□□ -0.06
RNFT1-208	ENST00000586083	CCL15	Q16663	113 aa		14.67	□□□□□ -0.06
RNFT1-208	ENST00000586083	FKBP1C	Q5VVH2	108 aa		14.67	□□□□□ -0.06
RNFT1-208	ENST00000586083	DCAF15	Q66K64	600 aa		14.67	□□□□□ -0.06
RNFT1-208	ENST00000586083	OTOP1	Q7RTM1	612 aa		14.67	□□□□□ -0.06
RNFT1-208	ENST00000586083	OTUD5	Q96G74	571 aa		14.67	□□□□□ -0.06
RNFT1-208	ENST00000586083	PTPN18	Q99952	460 aa		14.67	□□□□□ -0.06
RNFT1-208	ENST00000586083	CEP126	Q9P2H0	1117 aa		14.67	□□□□□ -0.06
RNFT1-208	ENST00000586083	TAF1C	Q15572	869 aa	Predicted RBP	14.66	□□□□□ -0.06
RNFT1-208	ENST00000586083	ATP2B3	Q16720	1220 aa		14.66	□□□□□ -0.06
RNFT1-208	ENST00000586083	INTS3	Q68E01	1043 aa	Known RBP	14.66	□□□□□ -0.06
RNFT1-208	ENST00000586083	APOBEC3H	Q6NTF7	200 aa	Known RBP	14.66	□□□□□ -0.06
RNFT1-208	ENST00000586083	MS4A4A	Q96JQ5	239 aa		14.66	□□□□□ -0.06
RNFT1-208	ENST00000586083	WRNIP1	Q96S55	665 aa		14.66	□□□□□ -0.06
RNFT1-208	ENST00000586083	SIL1	Q9H173	461 aa		14.66	□□□□□ -0.06
RNFT1-208	ENST00000586083	EFCC1	Q9HA90	598 aa		14.66	□□□□□ -0.06
RNFT1-208	ENST00000586083	ZFYVE28	Q9HCC9	887 aa		14.66	□□□□□ -0.06
RNFT1-208	ENST00000586083	NOB1	Q9ULX3	412 aa	Known RBP	14.66	□□□□□ -0.06

Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms