RNA–Protein interactions for RNA: ENST00000585961.1

CLPTM1-204, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 4

Gene CLPTM1, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-204ENST00000585961 TMEM39BQ9GZU3 492 aa25.32■■□□□ 1.64
CLPTM1-204ENST00000585961 BCAMP50895 628 aa25.31■■□□□ 1.64
CLPTM1-204ENST00000585961 CACNB3P54284 484 aa25.31■■□□□ 1.64
CLPTM1-204ENST00000585961 OPTNQ96CV9 577 aa25.31■■□□□ 1.64
CLPTM1-204ENST00000585961 UTYO14607 1347 aa25.31■■□□□ 1.64
CLPTM1-204ENST00000585961 CAVIN4Q5BKX8 364 aa25.3■■□□□ 1.64
CLPTM1-204ENST00000585961 OTUD7BQ6GQQ9 843 aa25.3■■□□□ 1.64
CLPTM1-204ENST00000585961 OTOP1Q7RTM1 612 aa25.3■■□□□ 1.64
CLPTM1-204ENST00000585961 TEPSINQ96N21 525 aa25.3■■□□□ 1.64
CLPTM1-204ENST00000585961 UNCXA6NJT0 531 aa25.29■■□□□ 1.64
CLPTM1-204ENST00000585961 CRHR2Q13324 411 aa25.29■■□□□ 1.64
CLPTM1-204ENST00000585961 TNFAIP1Q13829 316 aa25.29■■□□□ 1.64
CLPTM1-204ENST00000585961 CD99L2Q8TCZ2 262 aa25.29■■□□□ 1.64
CLPTM1-204ENST00000585961 RABL6Q3YEC7 729 aaPredicted RBP25.28■■□□□ 1.64
CLPTM1-204ENST00000585961 PPP1R3FQ6ZSY5 799 aaPredicted RBP25.28■■□□□ 1.64
CLPTM1-204ENST00000585961 SSH1Q8WYL5 1049 aa25.28■■□□□ 1.64
CLPTM1-204ENST00000585961 PDE8BO95263 885 aa25.27■■□□□ 1.64
CLPTM1-204ENST00000585961 MAP3K9P80192 1104 aa25.27■■□□□ 1.64
CLPTM1-204ENST00000585961 USP44Q9H0E7 712 aa25.27■■□□□ 1.64
CLPTM1-204ENST00000585961 ZNF521Q96K83 1311 aa25.27■■□□□ 1.64
CLPTM1-204ENST00000585961 TNNI2P48788 182 aa25.26■■□□□ 1.63
CLPTM1-204ENST00000585961 MS4A4AQ96JQ5 239 aa25.26■■□□□ 1.63
CLPTM1-204ENST00000585961 TESPA1A2RU30 521 aaPredicted RBP25.25■■□□□ 1.63
CLPTM1-204ENST00000585961 VGLL2Q8N8G2 317 aa25.25■■□□□ 1.63
CLPTM1-204ENST00000585961 A0A1B0GUL6 1792 aa25.24■■□□□ 1.63
CLPTM1-204ENST00000585961 CAP1Q01518 475 aa25.24■■□□□ 1.63
CLPTM1-204ENST00000585961 VGLL4Q14135 290 aa25.24■■□□□ 1.63
CLPTM1-204ENST00000585961 TEKT1Q969V4 418 aa25.24■■□□□ 1.63
CLPTM1-204ENST00000585961 ERO1AQ96HE7 468 aa25.24■■□□□ 1.63
CLPTM1-204ENST00000585961 PDE4DIPQ5VU43 2346 aa25.24■■□□□ 1.63
CLPTM1-204ENST00000585961 SP3Q02447 781 aa25.23■■□□□ 1.63
CLPTM1-204ENST00000585961 TBC1D22AQ8WUA7 517 aa25.23■■□□□ 1.63
CLPTM1-204ENST00000585961 BRI3BPQ8WY22 251 aa25.23■■□□□ 1.63
CLPTM1-204ENST00000585961 OTUD5Q96G74 571 aa25.23■■□□□ 1.63
CLPTM1-204ENST00000585961 EFCC1Q9HA90 598 aa25.23■■□□□ 1.63
CLPTM1-204ENST00000585961 PTPRCP08575 1304 aa25.22■■□□□ 1.63
CLPTM1-204ENST00000585961 POTEFA5A3E0 1075 aa25.22■■□□□ 1.63
CLPTM1-204ENST00000585961 PRPF38BQ5VTL8 546 aaKnown RBP25.22■■□□□ 1.63
CLPTM1-204ENST00000585961 CDCA7LQ96GN5 454 aa25.22■■□□□ 1.63
CLPTM1-204ENST00000585961 PTPN22Q9Y2R2 807 aa25.22■■□□□ 1.63
CLPTM1-204ENST00000585961 CSADQ9Y600 493 aa25.22■■□□□ 1.63
CLPTM1-204ENST00000585961 CCL15-CCL14A0A0B4J2E2 113 aa25.21■■□□□ 1.63
CLPTM1-204ENST00000585961 E9PSI1 815 aa25.21■■□□□ 1.63
CLPTM1-204ENST00000585961 IFIT1P09914 478 aaKnown RBP25.21■■□□□ 1.63
CLPTM1-204ENST00000585961 HDLBPQ00341 1268 aaKnown RBP25.21■■□□□ 1.63
CLPTM1-204ENST00000585961 CCL15Q16663 113 aa25.21■■□□□ 1.63
CLPTM1-204ENST00000585961 APOBEC3HQ6NTF7 200 aaKnown RBP25.21■■□□□ 1.63
CLPTM1-204ENST00000585961 DDX55Q8NHQ9 600 aaKnown RBP eCLIP25.21■■□□□ 1.63
CLPTM1-204ENST00000585961 SLFN5Q08AF3 891 aa25.2■■□□□ 1.62
CLPTM1-204ENST00000585961 ZKSCAN4Q969J2 545 aaPredicted RBP25.2■■□□□ 1.62
CLPTM1-204ENST00000585961 ZDHHC15Q96MV8 337 aa25.2■■□□□ 1.62
CLPTM1-204ENST00000585961 FGFR2P21802 821 aa25.19■■□□□ 1.62
CLPTM1-204ENST00000585961 GTF2A2P52657 109 aa25.19■■□□□ 1.62
CLPTM1-204ENST00000585961 PUM3Q15397 648 aaKnown RBP25.19■■□□□ 1.62
CLPTM1-204ENST00000585961 TAF1CQ15572 869 aaPredicted RBP25.19■■□□□ 1.62
CLPTM1-204ENST00000585961 MIGA2Q7L4E1 593 aa25.19■■□□□ 1.62
CLPTM1-204ENST00000585961 EYA2O00167 538 aa25.18■■□□□ 1.62
CLPTM1-204ENST00000585961 RFX5P48382 616 aaPredicted RBP25.18■■□□□ 1.62
CLPTM1-204ENST00000585961 FAM43AQ8N2R8 423 aa25.18■■□□□ 1.62
CLPTM1-204ENST00000585961 MRIQ9BWK5 157 aa25.18■■□□□ 1.62
CLPTM1-204ENST00000585961 SIL1Q9H173 461 aa25.18■■□□□ 1.62
CLPTM1-204ENST00000585961 ZFYVE28Q9HCC9 887 aa25.18■■□□□ 1.62
CLPTM1-204ENST00000585961 TMOD2Q9NZR1 351 aa25.18■■□□□ 1.62
CLPTM1-204ENST00000585961 ECM29Q5VYK3 1845 aa25.18■■□□□ 1.62
CLPTM1-204ENST00000585961 ECM2O94769 699 aaPredicted RBP25.17■■□□□ 1.62
CLPTM1-204ENST00000585961 WRNIP1Q96S55 665 aa25.17■■□□□ 1.62
CLPTM1-204ENST00000585961 SLC5A1P13866 664 aa25.16■■□□□ 1.62
CLPTM1-204ENST00000585961 EN2P19622 333 aaPredicted RBP25.16■■□□□ 1.62
CLPTM1-204ENST00000585961 INTS3Q68E01 1043 aaKnown RBP25.16■■□□□ 1.62
CLPTM1-204ENST00000585961 SMC4Q9NTJ3 1288 aa25.16■■□□□ 1.62
CLPTM1-204ENST00000585961 ATG9AQ7Z3C6 839 aa25.15■■□□□ 1.62
CLPTM1-204ENST00000585961 LPIN2Q92539 896 aa25.15■■□□□ 1.62
CLPTM1-204ENST00000585961 SNCAIPQ9Y6H5 919 aa25.15■■□□□ 1.62
CLPTM1-204ENST00000585961 MYCP01106 439 aaPredicted RBP25.14■■□□□ 1.62
CLPTM1-204ENST00000585961 TCP10Q12799 353 aa25.14■■□□□ 1.62
CLPTM1-204ENST00000585961 FAM83AQ86UY5 434 aa25.14■■□□□ 1.62
CLPTM1-204ENST00000585961 CENPFP49454 3210 aa25.13■■□□□ 1.61
CLPTM1-204ENST00000585961 SPDYE5A6NIY4 337 aa25.13■■□□□ 1.61
CLPTM1-204ENST00000585961 IRF6O14896 467 aa25.13■■□□□ 1.61
CLPTM1-204ENST00000585961 HHIPL2Q6UWX4 724 aa25.13■■□□□ 1.61
CLPTM1-204ENST00000585961 ERO1BQ86YB8 467 aa25.13■■□□□ 1.61
CLPTM1-204ENST00000585961 WDR66Q8TBY9 1149 aa25.13■■□□□ 1.61
CLPTM1-204ENST00000585961 NOB1Q9ULX3 412 aaKnown RBP25.13■■□□□ 1.61
CLPTM1-204ENST00000585961 SUGT1Q9Y2Z0 365 aa25.13■■□□□ 1.61
CLPTM1-204ENST00000585961 HTTP42858 3142 aa25.13■■□□□ 1.61
CLPTM1-204ENST00000585961 BTBD19C9JJ37 291 aa25.12■■□□□ 1.61
CLPTM1-204ENST00000585961 DIXDC1Q155Q3 683 aa25.12■■□□□ 1.61
CLPTM1-204ENST00000585961 CEP126Q9P2H0 1117 aa25.12■■□□□ 1.61
CLPTM1-204ENST00000585961 MAST3O60307 1309 aa25.12■■□□□ 1.61
CLPTM1-204ENST00000585961 CETPP11597 493 aa25.11■■□□□ 1.61
CLPTM1-204ENST00000585961 INPP5BP32019 993 aa25.11■■□□□ 1.61
CLPTM1-204ENST00000585961 ALDH1L2Q3SY69 923 aa25.11■■□□□ 1.61
CLPTM1-204ENST00000585961 FKBP1CQ5VVH2 108 aa25.11■■□□□ 1.61
CLPTM1-204ENST00000585961 CDC42EP5Q6NZY7 148 aa25.11■■□□□ 1.61
CLPTM1-204ENST00000585961 PTCH2Q9Y6C5 1203 aa25.11■■□□□ 1.61
CLPTM1-204ENST00000585961 UBTFL1P0CB47 393 aaPredicted RBP25.1■■□□□ 1.61
CLPTM1-204ENST00000585961 ARMC5Q96C12 935 aa25.1■■□□□ 1.61
CLPTM1-204ENST00000585961 ARHGAP39Q9C0H5 1083 aa25.1■■□□□ 1.61
CLPTM1-204ENST00000585961 PA2G4Q9UQ80 394 aaKnown RBP25.1■■□□□ 1.61
CLPTM1-204ENST00000585961 MKI67P46013 3256 aaKnown RBP25.09■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms