RNA–Protein interactions for RNA: ENST00000585856.2

PTBP1-206, Transcript of polypyrimidine tract binding protein 1, human

TSL 2

Gene PTBP1, Length 1,217 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTBP1-206	ENST00000585856	TNNI2	P48788	182 aa		33.39	■■■□□ 2.94
PTBP1-206	ENST00000585856	ANKRD44	Q8N8A2	993 aa		33.39	■■■□□ 2.94
PTBP1-206	ENST00000585856	MYH13	Q9UKX3	1938 aa		33.39	■■■□□ 2.94
PTBP1-206	ENST00000585856		E9PSI1	815 aa		33.38	■■■□□ 2.93
PTBP1-206	ENST00000585856	IGF2BP3	O00425	579 aa	Known RBP eCLIP	33.38	■■■□□ 2.93	5e-6	■■□□□ 12.8
PTBP1-206	ENST00000585856	PDE8B	O95263	885 aa		33.38	■■■□□ 2.93
PTBP1-206	ENST00000585856	HDLBP	Q00341	1268 aa	Known RBP	33.38	■■■□□ 2.93
PTBP1-206	ENST00000585856	LRRC24	Q50LG9	513 aa		33.37	■■■□□ 2.93
PTBP1-206	ENST00000585856	VGLL2	Q8N8G2	317 aa		33.37	■■■□□ 2.93
PTBP1-206	ENST00000585856	FRAT2	O75474	233 aa	Predicted RBP	33.36	■■■□□ 2.93
PTBP1-206	ENST00000585856	TEPSIN	Q96N21	525 aa		33.35	■■■□□ 2.93
PTBP1-206	ENST00000585856	KIF16B	Q96L93	1317 aa		33.34	■■■□□ 2.93
PTBP1-206	ENST00000585856	TESPA1	A2RU30	521 aa	Predicted RBP	33.34	■■■□□ 2.93
PTBP1-206	ENST00000585856	GJA5	P36382	358 aa		33.34	■■■□□ 2.93
PTBP1-206	ENST00000585856	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	33.34	■■■□□ 2.93
PTBP1-206	ENST00000585856	TCP10L2	B9ZVM9	353 aa		33.33	■■■□□ 2.93
PTBP1-206	ENST00000585856	CHAF1A	Q13111	956 aa	Predicted RBP	33.33	■■■□□ 2.93
PTBP1-206	ENST00000585856	SSH1	Q8WYL5	1049 aa		33.33	■■■□□ 2.93
PTBP1-206	ENST00000585856	TEKT1	Q969V4	418 aa		33.33	■■■□□ 2.93
PTBP1-206	ENST00000585856	USP44	Q9H0E7	712 aa		33.33	■■■□□ 2.93
PTBP1-206	ENST00000585856	OPTN	Q96CV9	577 aa		33.32	■■■□□ 2.92
PTBP1-206	ENST00000585856	ERO1A	Q96HE7	468 aa		33.32	■■■□□ 2.92
PTBP1-206	ENST00000585856	MRI	Q9BWK5	157 aa		33.32	■■■□□ 2.92
PTBP1-206	ENST00000585856	ELP3	Q9H9T3	547 aa		33.32	■■■□□ 2.92
PTBP1-206	ENST00000585856	SUGT1	Q9Y2Z0	365 aa		33.32	■■■□□ 2.92
PTBP1-206	ENST00000585856	TRIM17	Q9Y577	477 aa		33.32	■■■□□ 2.92
PTBP1-206	ENST00000585856	MAST3	O60307	1309 aa		33.31	■■■□□ 2.92
PTBP1-206	ENST00000585856	OTOP1	Q7RTM1	612 aa		33.31	■■■□□ 2.92
PTBP1-206	ENST00000585856	TMEM39B	Q9GZU3	492 aa		33.31	■■■□□ 2.92
PTBP1-206	ENST00000585856	IFIT1	P09914	478 aa	Known RBP	33.3	■■■□□ 2.92
PTBP1-206	ENST00000585856	CRHR2	Q13324	411 aa		33.3	■■■□□ 2.92
PTBP1-206	ENST00000585856	PUM3	Q15397	648 aa	Known RBP	33.3	■■■□□ 2.92
PTBP1-206	ENST00000585856	GRIK5	Q16478	980 aa		33.3	■■■□□ 2.92
PTBP1-206	ENST00000585856	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	33.29	■■■□□ 2.92
PTBP1-206	ENST00000585856	ZDHHC15	Q96MV8	337 aa		33.29	■■■□□ 2.92
PTBP1-206	ENST00000585856	TMOD2	Q9NZR1	351 aa		33.29	■■■□□ 2.92
PTBP1-206	ENST00000585856	MAP3K9	P80192	1104 aa		33.28	■■■□□ 2.92
PTBP1-206	ENST00000585856	ALDH1L2	Q3SY69	923 aa		33.28	■■■□□ 2.92
PTBP1-206	ENST00000585856	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	33.28	■■■□□ 2.92
PTBP1-206	ENST00000585856	KLHDC4	Q8TBB5	520 aa		33.28	■■■□□ 2.92
PTBP1-206	ENST00000585856	PTPN18	Q99952	460 aa		33.28	■■■□□ 2.92
PTBP1-206	ENST00000585856	CSAD	Q9Y600	493 aa		33.28	■■■□□ 2.92
PTBP1-206	ENST00000585856	BCAM	P50895	628 aa		33.27	■■■□□ 2.92
PTBP1-206	ENST00000585856	SLFN5	Q08AF3	891 aa		33.27	■■■□□ 2.92
PTBP1-206	ENST00000585856	PRPF38B	Q5VTL8	546 aa	Known RBP	33.27	■■■□□ 2.92
PTBP1-206	ENST00000585856	CDAN1	Q8IWY9	1227 aa		33.27	■■■□□ 2.92
PTBP1-206	ENST00000585856	MS4A4A	Q96JQ5	239 aa		33.27	■■■□□ 2.92
PTBP1-206	ENST00000585856	FGFR2	P21802	821 aa		33.26	■■■□□ 2.91
PTBP1-206	ENST00000585856	VGLL4	Q14135	290 aa		33.26	■■■□□ 2.91
PTBP1-206	ENST00000585856	FKBP1C	Q5VVH2	108 aa		33.26	■■■□□ 2.91
PTBP1-206	ENST00000585856	INTS3	Q68E01	1043 aa	Known RBP	33.26	■■■□□ 2.91
PTBP1-206	ENST00000585856	FAM83A	Q86UY5	434 aa		33.26	■■■□□ 2.91
PTBP1-206	ENST00000585856	HOOK2	Q96ED9	719 aa		33.26	■■■□□ 2.91
PTBP1-206	ENST00000585856	RBBP6	Q7Z6E9	1792 aa	Known RBP	33.26	■■■□□ 2.91
PTBP1-206	ENST00000585856	GTF2A2	P52657	109 aa		33.25	■■■□□ 2.91
PTBP1-206	ENST00000585856	SP3	Q02447	781 aa		33.24	■■■□□ 2.91
PTBP1-206	ENST00000585856	EYA2	O00167	538 aa		33.23	■■■□□ 2.91
PTBP1-206	ENST00000585856	SLC5A1	P13866	664 aa		33.23	■■■□□ 2.91
PTBP1-206	ENST00000585856	CD99L2	Q8TCZ2	262 aa		33.23	■■■□□ 2.91
PTBP1-206	ENST00000585856	LPIN2	Q92539	896 aa		33.23	■■■□□ 2.91
PTBP1-206	ENST00000585856	HHIPL2	Q6UWX4	724 aa		33.22	■■■□□ 2.91
PTBP1-206	ENST00000585856	WDR66	Q8TBY9	1149 aa		33.22	■■■□□ 2.91
PTBP1-206	ENST00000585856	PTPN22	Q9Y2R2	807 aa		33.22	■■■□□ 2.91
PTBP1-206	ENST00000585856	RPAP1	Q9BWH6	1393 aa	Predicted RBP	33.21	■■■□□ 2.91
PTBP1-206	ENST00000585856	RFX5	P48382	616 aa	Predicted RBP	33.21	■■■□□ 2.91
PTBP1-206	ENST00000585856	CACNB3	P54284	484 aa		33.21	■■■□□ 2.91
PTBP1-206	ENST00000585856	APOBEC3H	Q6NTF7	200 aa	Known RBP	33.21	■■■□□ 2.91
PTBP1-206	ENST00000585856	EFCC1	Q9HA90	598 aa		33.21	■■■□□ 2.91
PTBP1-206	ENST00000585856	SMC4	Q9NTJ3	1288 aa		33.21	■■■□□ 2.91
PTBP1-206	ENST00000585856	FBXO3	Q9UK99	471 aa		33.21	■■■□□ 2.91
PTBP1-206	ENST00000585856	CCL15-CCL14	A0A0B4J2E2	113 aa		33.2	■■■□□ 2.91
PTBP1-206	ENST00000585856	CCL15	Q16663	113 aa		33.2	■■■□□ 2.91
PTBP1-206	ENST00000585856	CNKSR2	Q8WXI2	1034 aa		33.2	■■■□□ 2.91
PTBP1-206	ENST00000585856	BRI3BP	Q8WY22	251 aa		33.2	■■■□□ 2.91
PTBP1-206	ENST00000585856	OTUD5	Q96G74	571 aa		33.2	■■■□□ 2.91
PTBP1-206	ENST00000585856	SPDYE5	A6NIY4	337 aa		33.19	■■■□□ 2.9
PTBP1-206	ENST00000585856	ZFYVE28	Q9HCC9	887 aa		33.19	■■■□□ 2.9
PTBP1-206	ENST00000585856	HTT	P42858	3142 aa		33.19	■■■□□ 2.9
PTBP1-206	ENST00000585856	ARHGEF6	Q15052	776 aa		33.18	■■■□□ 2.9
PTBP1-206	ENST00000585856	TAF1C	Q15572	869 aa	Predicted RBP	33.18	■■■□□ 2.9
PTBP1-206	ENST00000585856	ERO1B	Q86YB8	467 aa		33.18	■■■□□ 2.9
PTBP1-206	ENST00000585856	AK9	Q5TCS8	1911 aa		33.18	■■■□□ 2.9
PTBP1-206	ENST00000585856	WDHD1	O75717	1129 aa	Predicted RBP	33.17	■■■□□ 2.9
PTBP1-206	ENST00000585856	CT47B1	P0C2W7	299 aa	Predicted RBP	33.17	■■■□□ 2.9
PTBP1-206	ENST00000585856	DCAF15	Q66K64	600 aa		33.17	■■■□□ 2.9
PTBP1-206	ENST00000585856	WRNIP1	Q96S55	665 aa		33.17	■■■□□ 2.9
PTBP1-206	ENST00000585856	UBTFL1	P0CB47	393 aa	Predicted RBP	33.16	■■■□□ 2.9
PTBP1-206	ENST00000585856	ATG9A	Q7Z3C6	839 aa		33.16	■■■□□ 2.9
PTBP1-206	ENST00000585856	ZCCHC17	Q9NP64	241 aa	Known RBP	33.16	■■■□□ 2.9
PTBP1-206	ENST00000585856	HDAC5	Q9UQL6	1122 aa		33.16	■■■□□ 2.9
PTBP1-206	ENST00000585856	SNCAIP	Q9Y6H5	919 aa		33.16	■■■□□ 2.9
PTBP1-206	ENST00000585856	CIAO1	O76071	339 aa		33.15	■■■□□ 2.9
PTBP1-206	ENST00000585856	CETP	P11597	493 aa		33.14	■■■□□ 2.9
PTBP1-206	ENST00000585856	ARMC5	Q96C12	935 aa		33.14	■■■□□ 2.9
PTBP1-206	ENST00000585856	CDCA7L	Q96GN5	454 aa		33.14	■■■□□ 2.9
PTBP1-206	ENST00000585856	TRMT2A	Q8IZ69	625 aa	Known RBP	33.13	■■■□□ 2.89
PTBP1-206	ENST00000585856	FAM43A	Q8N2R8	423 aa		33.13	■■■□□ 2.89
PTBP1-206	ENST00000585856	GNL3L	Q9NVN8	582 aa	Known RBP	33.13	■■■□□ 2.89
PTBP1-206	ENST00000585856	SNAPC2	Q13487	334 aa		33.12	■■■□□ 2.89
PTBP1-206	ENST00000585856	ATP2B3	Q16720	1220 aa		33.12	■■■□□ 2.89

Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms