RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 IL27Q8NEV9 243 aa15.33■□□□□ 0.04
VMP1-202ENST00000585847 L3MBTL3Q96JM7 780 aaPredicted RBP15.33■□□□□ 0.04
VMP1-202ENST00000585847 BOLA2Q9H3K6 86 aa15.33■□□□□ 0.04
VMP1-202ENST00000585847 CREBZFQ9NS37 354 aa15.33■□□□□ 0.04
VMP1-202ENST00000585847 GNL3LQ9NVN8 582 aaKnown RBP15.33■□□□□ 0.04
VMP1-202ENST00000585847 GJA3Q9Y6H8 435 aa15.33■□□□□ 0.04
VMP1-202ENST00000585847 SALL1Q9NSC2 1324 aa15.33■□□□□ 0.04
VMP1-202ENST00000585847 IQCA1LA6NCM1 817 aa15.32■□□□□ 0.04
VMP1-202ENST00000585847 GMPSP49915 693 aaPredicted RBP15.32■□□□□ 0.04
VMP1-202ENST00000585847 CNTROBQ8N137 903 aa15.32■□□□□ 0.04
VMP1-202ENST00000585847 FBXW7Q969H0 707 aa15.32■□□□□ 0.04
VMP1-202ENST00000585847 EDC3Q96F86 508 aaKnown RBP15.32■□□□□ 0.04
VMP1-202ENST00000585847 ANTXR1Q9H6X2 564 aa15.32■□□□□ 0.04
VMP1-202ENST00000585847 MKRN1Q9UHC7 482 aaKnown RBP15.32■□□□□ 0.04
VMP1-202ENST00000585847 SCN4AP35499 1836 aa15.31■□□□□ 0.04
VMP1-202ENST00000585847 LRRFIP1Q32MZ4 808 aaKnown RBP15.31■□□□□ 0.04
VMP1-202ENST00000585847 MFSD14BQ5SR56 506 aa15.31■□□□□ 0.04
VMP1-202ENST00000585847 TBC1D9Q6ZT07 1266 aa15.31■□□□□ 0.04
VMP1-202ENST00000585847 AGBL3Q8NEM8 1001 aa15.31■□□□□ 0.04
VMP1-202ENST00000585847 WDR66Q8TBY9 1149 aa15.31■□□□□ 0.04
VMP1-202ENST00000585847 ZNF384Q8TF68 577 aa15.31■□□□□ 0.04
VMP1-202ENST00000585847 HAUS7Q99871 368 aa15.31■□□□□ 0.04
VMP1-202ENST00000585847 PIH1D3Q9NQM4 214 aaKnown RBP15.31■□□□□ 0.04
VMP1-202ENST00000585847 IGSF3O75054 1194 aa15.3■□□□□ 0.04
VMP1-202ENST00000585847 FRAT2O75474 233 aaPredicted RBP15.3■□□□□ 0.04
VMP1-202ENST00000585847 GSPT1P15170 499 aaKnown RBP15.3■□□□□ 0.04
VMP1-202ENST00000585847 PRDX5P30044 214 aa15.3■□□□□ 0.04
VMP1-202ENST00000585847 DPF2Q92785 391 aa15.3■□□□□ 0.04
VMP1-202ENST00000585847 MYH7P12883 1935 aa15.29■□□□□ 0.04
VMP1-202ENST00000585847 MYH2Q9UKX2 1941 aa15.29■□□□□ 0.04
VMP1-202ENST00000585847 REC8O95072 547 aa15.29■□□□□ 0.04
VMP1-202ENST00000585847 RPS12P25398 132 aaKnown RBP15.29■□□□□ 0.04
VMP1-202ENST00000585847 EPS15P42566 896 aa15.29■□□□□ 0.04
VMP1-202ENST00000585847 ZNF280AP59817 542 aaPredicted RBP15.29■□□□□ 0.04
VMP1-202ENST00000585847 TBC1D22AQ8WUA7 517 aa15.29■□□□□ 0.04
VMP1-202ENST00000585847 EVI5LQ96CN4 794 aa15.29■□□□□ 0.04
VMP1-202ENST00000585847 GPRC5DQ9NZD1 345 aa15.29■□□□□ 0.04
VMP1-202ENST00000585847 PCDHAC2Q9Y5I4 1007 aa15.29■□□□□ 0.04
VMP1-202ENST00000585847 MYO3BQ8WXR4 1341 aa15.28■□□□□ 0.04
VMP1-202ENST00000585847 EGFRP00533 1210 aa15.28■□□□□ 0.04
VMP1-202ENST00000585847 POTEIP0CG38 1075 aa15.28■□□□□ 0.04
VMP1-202ENST00000585847 POTEJP0CG39 1038 aa15.28■□□□□ 0.04
VMP1-202ENST00000585847 SDSP20132 328 aa15.28■□□□□ 0.04
VMP1-202ENST00000585847 KIAA0825Q8IV33 1275 aa15.28■□□□□ 0.04
VMP1-202ENST00000585847 CNOT7Q9UIV1 285 aaKnown RBP15.28■□□□□ 0.04
VMP1-202ENST00000585847 MAST2Q6P0Q8 1798 aa15.28■□□□□ 0.04
VMP1-202ENST00000585847 F8W031 263 aaPredicted RBP15.27■□□□□ 0.04
VMP1-202ENST00000585847 EAPPQ56P03 285 aaPredicted RBP15.27■□□□□ 0.04
VMP1-202ENST00000585847 TMED8Q6PL24 325 aaPredicted RBP15.27■□□□□ 0.04
VMP1-202ENST00000585847 LDHDQ86WU2 507 aa15.27■□□□□ 0.04
VMP1-202ENST00000585847 MICALL2Q8IY33 904 aa15.27■□□□□ 0.04
VMP1-202ENST00000585847 RUFY2Q8WXA3 655 aa15.27■□□□□ 0.04
VMP1-202ENST00000585847 ZBED3Q96IU2 234 aaPredicted RBP15.27■□□□□ 0.04
VMP1-202ENST00000585847 DNAJC2Q99543 621 aaKnown RBP15.27■□□□□ 0.04
VMP1-202ENST00000585847 SUGT1Q9Y2Z0 365 aa15.27■□□□□ 0.04
VMP1-202ENST00000585847 RAD50Q92878 1312 aa15.26■□□□□ 0.03
VMP1-202ENST00000585847 GOLIM4O00461 696 aa15.26■□□□□ 0.03
VMP1-202ENST00000585847 MAP4K4O95819 1239 aaPredicted RBP15.26■□□□□ 0.03
VMP1-202ENST00000585847 CHGBP05060 677 aa15.26■□□□□ 0.03
VMP1-202ENST00000585847 USP17L8P0C7I0 530 aa15.26■□□□□ 0.03
VMP1-202ENST00000585847 ANP32AP39687 249 aaKnown RBP15.26■□□□□ 0.03
VMP1-202ENST00000585847 HIRAP54198 1017 aaPredicted RBP15.26■□□□□ 0.03
VMP1-202ENST00000585847 TRPM4Q8TD43 1214 aa15.26■□□□□ 0.03
VMP1-202ENST00000585847 AIDAQ96BJ3 306 aa15.26■□□□□ 0.03
VMP1-202ENST00000585847 PAG1Q9NWQ8 432 aa15.26■□□□□ 0.03
VMP1-202ENST00000585847 ABCF2Q9UG63 623 aa15.26■□□□□ 0.03
VMP1-202ENST00000585847 TTF2Q9UNY4 1162 aaKnown RBP15.26■□□□□ 0.03
VMP1-202ENST00000585847 CLEC11AQ9Y240 323 aa15.26■□□□□ 0.03
VMP1-202ENST00000585847 POLR2AP24928 1970 aaKnown RBP15.25■□□□□ 0.03
VMP1-202ENST00000585847 CNTNAP1P78357 1384 aa15.25■□□□□ 0.03
VMP1-202ENST00000585847 ECM29Q5VYK3 1845 aa15.25■□□□□ 0.03
VMP1-202ENST00000585847 LDHBP07195 334 aaKnown RBP15.25■□□□□ 0.03
VMP1-202ENST00000585847 SLFNL1Q499Z3 407 aa15.25■□□□□ 0.03
VMP1-202ENST00000585847 SAMD7Q7Z3H4 446 aa15.25■□□□□ 0.03
VMP1-202ENST00000585847 ZGPATQ8N5A5 531 aaKnown RBP15.25■□□□□ 0.03
VMP1-202ENST00000585847 NSUN4Q96CB9 384 aaKnown RBP15.25■□□□□ 0.03
VMP1-202ENST00000585847 TAF1DQ9H5J8 278 aaPredicted RBP15.25■□□□□ 0.03
VMP1-202ENST00000585847 AK9Q5TCS8 1911 aa15.25■□□□□ 0.03
VMP1-202ENST00000585847 TRIM6-TRIM34B2RNG4 842 aa15.24■□□□□ 0.03
VMP1-202ENST00000585847 MECOMQ03112 1051 aa15.24■□□□□ 0.03
VMP1-202ENST00000585847 DIXDC1Q155Q3 683 aa15.24■□□□□ 0.03
VMP1-202ENST00000585847 ERICH6Q7L0X2 663 aa15.24■□□□□ 0.03
VMP1-202ENST00000585847 MTMR14Q8NCE2 650 aa15.24■□□□□ 0.03
VMP1-202ENST00000585847 MRIQ9BWK5 157 aa15.24■□□□□ 0.03
VMP1-202ENST00000585847 HACL1Q9UJ83 578 aa15.24■□□□□ 0.03
VMP1-202ENST00000585847 RBM19Q9Y4C8 960 aaKnown RBP15.24■□□□□ 0.03
VMP1-202ENST00000585847 GAKO14976 1311 aa15.23■□□□□ 0.03
VMP1-202ENST00000585847 TCRBV5S4A2TA0A5A2 114 aa15.23■□□□□ 0.03
VMP1-202ENST00000585847 TMEM88BA6NKF7 163 aa15.23■□□□□ 0.03
VMP1-202ENST00000585847 EPHX2P34913 555 aa15.23■□□□□ 0.03
VMP1-202ENST00000585847 CRKP46108 304 aa15.23■□□□□ 0.03
VMP1-202ENST00000585847 HDLBPQ00341 1268 aaKnown RBP15.23■□□□□ 0.03
VMP1-202ENST00000585847 CFAP100Q494V2 611 aa15.23■□□□□ 0.03
VMP1-202ENST00000585847 TBC1D10BQ4KMP7 808 aaPredicted RBP15.23■□□□□ 0.03
VMP1-202ENST00000585847 ADGRA1Q86SQ6 560 aa15.23■□□□□ 0.03
VMP1-202ENST00000585847 KBTBD3Q8NAB2 608 aa15.23■□□□□ 0.03
VMP1-202ENST00000585847 FAM163AQ96GL9 167 aaPredicted RBP15.23■□□□□ 0.03
VMP1-202ENST00000585847 DDRGK1Q96HY6 314 aa15.23■□□□□ 0.03
VMP1-202ENST00000585847 MYOZ2Q9NPC6 264 aa15.23■□□□□ 0.03
VMP1-202ENST00000585847 ADARB2Q9NS39 739 aaKnown RBP15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms