RNA–Protein interactions for RNA: ENST00000585031.2

TOP3A-220, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-220ENST00000585031 DPF3Q92784 378 aa23.15■■□□□ 1.3
TOP3A-220ENST00000585031 ANKRD18BA2A2Z9 1011 aa23.14■■□□□ 1.29
TOP3A-220ENST00000585031 TCP10L2B9ZVM9 353 aa23.14■■□□□ 1.29
TOP3A-220ENST00000585031 ECM2O94769 699 aaPredicted RBP23.14■■□□□ 1.29
TOP3A-220ENST00000585031 SLC4A2P04920 1241 aa23.14■■□□□ 1.29
TOP3A-220ENST00000585031 GTF2A2P52657 109 aa23.14■■□□□ 1.29
TOP3A-220ENST00000585031 MAP3K9P80192 1104 aa23.14■■□□□ 1.29
TOP3A-220ENST00000585031 DDX10Q13206 875 aaKnown RBP23.14■■□□□ 1.29
TOP3A-220ENST00000585031 GRIK5Q16478 980 aa23.14■■□□□ 1.29
TOP3A-220ENST00000585031 ZNF594Q96JF6 807 aaPredicted RBP23.14■■□□□ 1.29
TOP3A-220ENST00000585031 FAM205AQ6ZU69 1335 aa23.13■■□□□ 1.29
TOP3A-220ENST00000585031 GNRH1P01148 92 aa23.13■■□□□ 1.29
TOP3A-220ENST00000585031 LACTBP83111 547 aaPredicted RBP23.13■■□□□ 1.29
TOP3A-220ENST00000585031 CALD1Q05682 793 aaKnown RBP23.13■■□□□ 1.29
TOP3A-220ENST00000585031 BTBD19C9JJ37 291 aa23.12■■□□□ 1.29
TOP3A-220ENST00000585031 TLR2O60603 784 aa23.12■■□□□ 1.29
TOP3A-220ENST00000585031 EPHA10Q5JZY3 1008 aa23.12■■□□□ 1.29
TOP3A-220ENST00000585031 DZIP1LQ8IYY4 767 aaKnown RBP23.12■■□□□ 1.29
TOP3A-220ENST00000585031 TTF2Q9UNY4 1162 aaKnown RBP23.12■■□□□ 1.29
TOP3A-220ENST00000585031 PLIN1O60240 522 aa23.11■■□□□ 1.29
TOP3A-220ENST00000585031 PRMT2P55345 433 aa23.11■■□□□ 1.29
TOP3A-220ENST00000585031 TDRD7Q8NHU6 1098 aaKnown RBP23.11■■□□□ 1.29
TOP3A-220ENST00000585031 STK31Q9BXU1 1019 aa23.11■■□□□ 1.29
TOP3A-220ENST00000585031 SNCAIPQ9Y6H5 919 aa23.11■■□□□ 1.29
TOP3A-220ENST00000585031 FLIIQ13045 1269 aa23.1■■□□□ 1.29
TOP3A-220ENST00000585031 TNFAIP1Q13829 316 aa23.1■■□□□ 1.29
TOP3A-220ENST00000585031 MFSD14BQ5SR56 506 aa23.1■■□□□ 1.29
TOP3A-220ENST00000585031 SERPINA10Q9UK55 444 aa23.1■■□□□ 1.29
TOP3A-220ENST00000585031 SPDYE5A6NIY4 337 aa23.09■■□□□ 1.29
TOP3A-220ENST00000585031 GYG1P46976 350 aa23.09■■□□□ 1.29
TOP3A-220ENST00000585031 IFIT5Q13325 482 aaKnown RBP23.09■■□□□ 1.29
TOP3A-220ENST00000585031 KIF22Q14807 665 aa23.09■■□□□ 1.29
TOP3A-220ENST00000585031 LINS1Q8NG48 757 aa23.09■■□□□ 1.29
TOP3A-220ENST00000585031 DNAAF4Q8WXU2 420 aa23.09■■□□□ 1.29
TOP3A-220ENST00000585031 CHMP4AQ9BY43 222 aa23.09■■□□□ 1.29
TOP3A-220ENST00000585031 ZCCHC17Q9NP64 241 aaKnown RBP23.09■■□□□ 1.29
TOP3A-220ENST00000585031 CACNB3P54284 484 aa23.08■■□□□ 1.29
TOP3A-220ENST00000585031 TWISTNBQ3B726 338 aaPredicted RBP23.08■■□□□ 1.29
TOP3A-220ENST00000585031 NKX2-3Q8TAU0 364 aa23.08■■□□□ 1.29
TOP3A-220ENST00000585031 ZKSCAN4Q969J2 545 aaPredicted RBP23.08■■□□□ 1.29
TOP3A-220ENST00000585031 CACNA1FO60840 1977 aa23.07■■□□□ 1.28
TOP3A-220ENST00000585031 IRF6O14896 467 aa23.07■■□□□ 1.28
TOP3A-220ENST00000585031 CRKP46108 304 aa23.07■■□□□ 1.28
TOP3A-220ENST00000585031 GJA8P48165 433 aa23.07■■□□□ 1.28
TOP3A-220ENST00000585031 LMBR1LQ6UX01 489 aa23.07■■□□□ 1.28
TOP3A-220ENST00000585031 C17orf99Q6UX52 265 aa23.07■■□□□ 1.28
TOP3A-220ENST00000585031 FAM84BQ96KN1 310 aaPredicted RBP23.07■■□□□ 1.28
TOP3A-220ENST00000585031 HTATIP2Q9BUP3 242 aa23.07■■□□□ 1.28
TOP3A-220ENST00000585031 MYH16Q9H6N6 1097 aa23.07■■□□□ 1.28
TOP3A-220ENST00000585031 CHMP3Q9Y3E7 222 aa23.07■■□□□ 1.28
TOP3A-220ENST00000585031 CSADQ9Y600 493 aa23.07■■□□□ 1.28
TOP3A-220ENST00000585031 A0A1W2PPC1 479 aa23.06■■□□□ 1.28
TOP3A-220ENST00000585031 GJB1P08034 283 aa23.06■■□□□ 1.28
TOP3A-220ENST00000585031 TRIM47Q96LD4 638 aa23.06■■□□□ 1.28
TOP3A-220ENST00000585031 NR2E3Q9Y5X4 410 aa23.06■■□□□ 1.28
TOP3A-220ENST00000585031 ZBTB7BO15156 539 aaPredicted RBP23.05■■□□□ 1.28
TOP3A-220ENST00000585031 WDHD1O75717 1129 aaPredicted RBP23.05■■□□□ 1.28
TOP3A-220ENST00000585031 CETPP11597 493 aa23.05■■□□□ 1.28
TOP3A-220ENST00000585031 MNX1P50219 401 aaPredicted RBP23.05■■□□□ 1.28
TOP3A-220ENST00000585031 FKBP5Q13451 457 aaPredicted RBP23.05■■□□□ 1.28
TOP3A-220ENST00000585031 LDHAL6AQ6ZMR3 332 aa23.05■■□□□ 1.28
TOP3A-220ENST00000585031 ERO1BQ86YB8 467 aa23.05■■□□□ 1.28
TOP3A-220ENST00000585031 SRRDQ9UH36 339 aa23.05■■□□□ 1.28
TOP3A-220ENST00000585031 CPA4Q9UI42 421 aa23.05■■□□□ 1.28
TOP3A-220ENST00000585031 SOX1O00570 391 aaPredicted RBP23.04■■□□□ 1.28
TOP3A-220ENST00000585031 PUS3Q9BZE2 481 aaKnown RBP23.04■■□□□ 1.28
TOP3A-220ENST00000585031 F6X3S4 739 aa23.03■■□□□ 1.28
TOP3A-220ENST00000585031 ADGRA2Q96PE1 1338 aa23.03■■□□□ 1.28
TOP3A-220ENST00000585031 MGAMO43451 1857 aa23.02■■□□□ 1.28
TOP3A-220ENST00000585031 OSBPP22059 807 aa23.02■■□□□ 1.28
TOP3A-220ENST00000585031 HIBADHP31937 336 aaKnown RBP23.02■■□□□ 1.28
TOP3A-220ENST00000585031 PSMC4P43686 418 aa23.02■■□□□ 1.28
TOP3A-220ENST00000585031 BEND3Q5T5X7 828 aa23.02■■□□□ 1.28
TOP3A-220ENST00000585031 WRNIP1Q96S55 665 aa23.02■■□□□ 1.28
TOP3A-220ENST00000585031 IQSEC3Q9UPP2 1182 aaPredicted RBP23.02■■□□□ 1.28
TOP3A-220ENST00000585031 CCL5P13501 91 aa23.01■■□□□ 1.27
TOP3A-220ENST00000585031 GRK4P32298 578 aa23.01■■□□□ 1.27
TOP3A-220ENST00000585031 TNNI2P48788 182 aa23.01■■□□□ 1.27
TOP3A-220ENST00000585031 PPIL2Q13356 520 aa23.01■■□□□ 1.27
TOP3A-220ENST00000585031 SNAPC2Q13487 334 aa23.01■■□□□ 1.27
TOP3A-220ENST00000585031 LRCH3Q96II8 777 aa23.01■■□□□ 1.27
TOP3A-220ENST00000585031 PRKRIP1Q9H875 184 aaPredicted RBP23.01■■□□□ 1.27
TOP3A-220ENST00000585031 CNNM1Q9NRU3 951 aa23.01■■□□□ 1.27
TOP3A-220ENST00000585031 RIPOR2Q9Y4F9 1068 aa23.01■■□□□ 1.27
TOP3A-220ENST00000585031 HOXD10P28358 340 aa23■■□□□ 1.27
TOP3A-220ENST00000585031 MOGSQ13724 837 aa23■■□□□ 1.27
TOP3A-220ENST00000585031 UBE4AQ14139 1066 aa23■■□□□ 1.27
TOP3A-220ENST00000585031 ALPK3Q96L96 1907 aa23■■□□□ 1.27
TOP3A-220ENST00000585031 INPP5BP32019 993 aa22.99■■□□□ 1.27
TOP3A-220ENST00000585031 CCDC57Q2TAC2 916 aa22.99■■□□□ 1.27
TOP3A-220ENST00000585031 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.99■■□□□ 1.27
TOP3A-220ENST00000585031 MIGA2Q7L4E1 593 aa22.98■■□□□ 1.27
TOP3A-220ENST00000585031 FBXO33Q7Z6M2 555 aa22.98■■□□□ 1.27
TOP3A-220ENST00000585031 WWC1Q8IX03 1113 aa22.98■■□□□ 1.27
TOP3A-220ENST00000585031 RNF208Q9H0X6 261 aa22.98■■□□□ 1.27
TOP3A-220ENST00000585031 CHAF1AQ13111 956 aaPredicted RBP22.97■■□□□ 1.27
TOP3A-220ENST00000585031 APOBEC3HQ6NTF7 200 aaKnown RBP22.97■■□□□ 1.27
TOP3A-220ENST00000585031 RAET1EQ8TD07 263 aa22.97■■□□□ 1.27
TOP3A-220ENST00000585031 KAZALD1Q96I82 304 aa22.97■■□□□ 1.27
TOP3A-220ENST00000585031 PDHXO00330 501 aa22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms