RNA–Protein interactions for RNA: ENST00000584796.5

VAPA-208, Transcript of VAMP associated protein A, humanhuman

TSL 3

Gene VAPA, Length 654 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-208ENST00000584796 FOSL1P15407 271 aa5.95□□□□□ -1.46
VAPA-208ENST00000584796 TAL1P17542 331 aaPredicted RBP5.95□□□□□ -1.46
VAPA-208ENST00000584796 SOX4Q06945 474 aaPredicted RBP5.95□□□□□ -1.46
VAPA-208ENST00000584796 MSMPQ1L6U9 139 aa5.95□□□□□ -1.46
VAPA-208ENST00000584796 B4GALNT3Q6L9W6 998 aa5.95□□□□□ -1.46
VAPA-208ENST00000584796 LIN7BQ9HAP6 207 aa5.95□□□□□ -1.46
VAPA-208ENST00000584796 H3BRB1 525 aa5.94□□□□□ -1.46
VAPA-208ENST00000584796 CTSBP07858 339 aa5.94□□□□□ -1.46
VAPA-208ENST00000584796 ADH5P11766 374 aa5.94□□□□□ -1.46
VAPA-208ENST00000584796 USP11P51784 963 aa5.94□□□□□ -1.46
VAPA-208ENST00000584796 SPRED3Q2MJR0 410 aa5.94□□□□□ -1.46
VAPA-208ENST00000584796 KIAA0319Q5VV43 1072 aa5.94□□□□□ -1.46
VAPA-208ENST00000584796 USPL1Q5W0Q7 1092 aa5.94□□□□□ -1.46
VAPA-208ENST00000584796 PAOXQ6QHF9 649 aa5.94□□□□□ -1.46
VAPA-208ENST00000584796 SHISA5Q8N114 240 aa5.94□□□□□ -1.46
VAPA-208ENST00000584796 FBXL6Q8N531 539 aa5.94□□□□□ -1.46
VAPA-208ENST00000584796 FBLIM1Q8WUP2 373 aa5.94□□□□□ -1.46
VAPA-208ENST00000584796 TRIM56Q9BRZ2 755 aaKnown RBP5.94□□□□□ -1.46
VAPA-208ENST00000584796 TUT1Q9H6E5 874 aaKnown RBP5.94□□□□□ -1.46
VAPA-208ENST00000584796 ATG3Q9NT62 314 aa5.94□□□□□ -1.46
VAPA-208ENST00000584796 BRPF3Q9ULD4 1205 aa5.94□□□□□ -1.46
VAPA-208ENST00000584796 LEMD3Q9Y2U8 911 aa5.94□□□□□ -1.46
VAPA-208ENST00000584796 B3GALT4O96024 378 aa5.93□□□□□ -1.46
VAPA-208ENST00000584796 PRNPP04156 253 aa5.93□□□□□ -1.46
VAPA-208ENST00000584796 CYP11A1P05108 521 aa5.93□□□□□ -1.46
VAPA-208ENST00000584796 MAOBP27338 520 aa5.93□□□□□ -1.46
VAPA-208ENST00000584796 SERPINB4P48594 390 aa5.93□□□□□ -1.46
VAPA-208ENST00000584796 ARHGAP4P98171 946 aa5.93□□□□□ -1.46
VAPA-208ENST00000584796 NFKBIBQ15653 356 aa5.93□□□□□ -1.46
VAPA-208ENST00000584796 GLYCTKQ8IVS8 523 aa5.93□□□□□ -1.46
VAPA-208ENST00000584796 GATA6Q92908 595 aa5.93□□□□□ -1.46
VAPA-208ENST00000584796 FAM129BQ96TA1 746 aa5.93□□□□□ -1.46
VAPA-208ENST00000584796 METTL22Q9BUU2 404 aaPredicted RBP5.93□□□□□ -1.46
VAPA-208ENST00000584796 OSBPL1AQ9BXW6 950 aa5.93□□□□□ -1.46
VAPA-208ENST00000584796 PRKAG2Q9UGJ0 569 aa5.93□□□□□ -1.46
VAPA-208ENST00000584796 ACTL7BQ9Y614 415 aa5.93□□□□□ -1.46
VAPA-208ENST00000584796 NEFLP07196 543 aa5.92□□□□□ -1.46
VAPA-208ENST00000584796 ITPKAP23677 461 aa5.92□□□□□ -1.46
VAPA-208ENST00000584796 ADMP35318 185 aa5.92□□□□□ -1.46
VAPA-208ENST00000584796 POU4F3Q15319 338 aa5.92□□□□□ -1.46
VAPA-208ENST00000584796 HP1BP3Q5SSJ5 553 aaPredicted RBP5.92□□□□□ -1.46
VAPA-208ENST00000584796 ZAR1Q86SH2 424 aa5.92□□□□□ -1.46
VAPA-208ENST00000584796 YIPF2Q9BWQ6 316 aa5.92□□□□□ -1.46
VAPA-208ENST00000584796 ZNF576Q9H609 170 aa5.92□□□□□ -1.46
VAPA-208ENST00000584796 ADGRE2Q9UHX3 823 aa5.92□□□□□ -1.46
VAPA-208ENST00000584796 NDUFB5O43674 189 aa5.91□□□□□ -1.46
VAPA-208ENST00000584796 IGHA2P01877 340 aa5.91□□□□□ -1.46
VAPA-208ENST00000584796 PDE3BQ13370 1112 aa5.91□□□□□ -1.46
VAPA-208ENST00000584796 NFXL1Q6ZNB6 911 aa5.91□□□□□ -1.46
VAPA-208ENST00000584796 TBC1D32Q96NH3 1257 aa5.91□□□□□ -1.46
VAPA-208ENST00000584796 GSX1Q9H4S2 264 aaPredicted RBP5.91□□□□□ -1.46
VAPA-208ENST00000584796 ACSS3Q9H6R3 686 aa5.91□□□□□ -1.46
VAPA-208ENST00000584796 ZFYVE1Q9HBF4 777 aa5.91□□□□□ -1.46
VAPA-208ENST00000584796 CPNE3O75131 537 aaKnown RBP5.9□□□□□ -1.46
VAPA-208ENST00000584796 ECEL1O95672 775 aa5.9□□□□□ -1.46
VAPA-208ENST00000584796 TXKP42681 527 aa5.9□□□□□ -1.46
VAPA-208ENST00000584796 PTPN12Q05209 780 aaKnown RBP5.9□□□□□ -1.46
VAPA-208ENST00000584796 ORC1Q13415 861 aa5.9□□□□□ -1.46
VAPA-208ENST00000584796 ABI1Q8IZP0 508 aa5.9□□□□□ -1.46
VAPA-208ENST00000584796 DDX54Q8TDD1 881 aaKnown RBP5.9□□□□□ -1.46
VAPA-208ENST00000584796 CITED4Q96RK1 184 aa5.9□□□□□ -1.46
VAPA-208ENST00000584796 SEMA6CQ9H3T2 930 aa5.9□□□□□ -1.46
VAPA-208ENST00000584796 NPHS2Q9NP85 383 aa5.9□□□□□ -1.46
VAPA-208ENST00000584796 CCDC39Q9UFE4 941 aa5.9□□□□□ -1.46
VAPA-208ENST00000584796 SYNGAP1Q96PV0 1343 aa5.9□□□□□ -1.47
VAPA-208ENST00000584796 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.89□□□□□ -1.47
VAPA-208ENST00000584796 FAM170BA6NMN3 283 aa5.89□□□□□ -1.47
VAPA-208ENST00000584796 CYP26A1O43174 497 aa5.89□□□□□ -1.47
VAPA-208ENST00000584796 NFICP08651 508 aa5.89□□□□□ -1.47
VAPA-208ENST00000584796 MAP7Q14244 749 aa5.89□□□□□ -1.47
VAPA-208ENST00000584796 PRPF40BQ6NWY9 871 aaKnown RBP5.89□□□□□ -1.47
VAPA-208ENST00000584796 TXNDC2Q86VQ3 553 aa5.89□□□□□ -1.47
VAPA-208ENST00000584796 VSIG10LQ86VR7 867 aa5.89□□□□□ -1.47
VAPA-208ENST00000584796 CORO1BQ9BR76 489 aa5.89□□□□□ -1.47
VAPA-208ENST00000584796 EHD4Q9H223 541 aa5.89□□□□□ -1.47
VAPA-208ENST00000584796 ABCB6Q9NP58 842 aa5.89□□□□□ -1.47
VAPA-208ENST00000584796 FAM105AQ9NUU6 356 aa5.89□□□□□ -1.47
VAPA-208ENST00000584796 ANGEL1Q9UNK9 670 aaKnown RBP5.89□□□□□ -1.47
VAPA-208ENST00000584796 RAB6AP20340 208 aa5.88□□□□□ -1.47
VAPA-208ENST00000584796 RPS26P11Q5JNZ5 115 aaPredicted RBP5.88□□□□□ -1.47
VAPA-208ENST00000584796 AKAP4Q5JQC9 854 aa5.88□□□□□ -1.47
VAPA-208ENST00000584796 SEZ6L2Q6UXD5 910 aa5.88□□□□□ -1.47
VAPA-208ENST00000584796 DYMQ7RTS9 669 aa5.88□□□□□ -1.47
VAPA-208ENST00000584796 CCDC74AQ96AQ1 378 aa5.88□□□□□ -1.47
VAPA-208ENST00000584796 KRTAP9-9Q9BYP9 154 aa5.88□□□□□ -1.47
VAPA-208ENST00000584796 KRTAP9-4Q9BYQ2 154 aa5.88□□□□□ -1.47
VAPA-208ENST00000584796 DNAJC25Q9H1X3 360 aa5.88□□□□□ -1.47
VAPA-208ENST00000584796 EIF1AYO14602 144 aaKnown RBP5.87□□□□□ -1.47
VAPA-208ENST00000584796 GPR182O15218 404 aa5.87□□□□□ -1.47
VAPA-208ENST00000584796 AOC2O75106 756 aa5.87□□□□□ -1.47
VAPA-208ENST00000584796 CYP27A1Q02318 531 aa5.87□□□□□ -1.47
VAPA-208ENST00000584796 AP3B2Q13367 1082 aa5.87□□□□□ -1.47
VAPA-208ENST00000584796 CBLL1Q75N03 491 aa5.87□□□□□ -1.47
VAPA-208ENST00000584796 FBXL18Q96ME1 805 aa5.87□□□□□ -1.47
VAPA-208ENST00000584796 WDR18Q9BV38 432 aa5.87□□□□□ -1.47
VAPA-208ENST00000584796 RAD18Q9NS91 495 aa5.87□□□□□ -1.47
VAPA-208ENST00000584796 BSDC1Q9NW68 430 aaPredicted RBP5.87□□□□□ -1.47
VAPA-208ENST00000584796 AP4E1Q9UPM8 1137 aa5.87□□□□□ -1.47
VAPA-208ENST00000584796 RNF114Q9Y508 228 aa5.87□□□□□ -1.47
VAPA-208ENST00000584796 ASPAP45381 313 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms