RNA–Protein interactions for RNA: ENST00000584672.1

CSNK1D-224, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-224ENST00000584672 FKBP1AP62942 108 aaKnown RBP18.09■□□□□ 0.49
CSNK1D-224ENST00000584672 GCKRQ14397 625 aa18.09■□□□□ 0.49
CSNK1D-224ENST00000584672 C15orf52Q6ZUT6 534 aaKnown RBP18.09■□□□□ 0.49
CSNK1D-224ENST00000584672 PLA2G12BQ9BX93 195 aa18.09■□□□□ 0.49
CSNK1D-224ENST00000584672 CPA4Q9UI42 421 aa18.09■□□□□ 0.49
CSNK1D-224ENST00000584672 SOX1O00570 391 aaPredicted RBP18.08■□□□□ 0.48
CSNK1D-224ENST00000584672 APAF1O14727 1248 aa18.08■□□□□ 0.48
CSNK1D-224ENST00000584672 CSF1RP07333 972 aa18.08■□□□□ 0.48
CSNK1D-224ENST00000584672 CACNB3P54284 484 aa18.08■□□□□ 0.48
CSNK1D-224ENST00000584672 CASP7P55210 303 aa18.08■□□□□ 0.48
CSNK1D-224ENST00000584672 MFSD14BQ5SR56 506 aa18.08■□□□□ 0.48
CSNK1D-224ENST00000584672 DZIP1LQ8IYY4 767 aaKnown RBP18.08■□□□□ 0.48
CSNK1D-224ENST00000584672 STK31Q9BXU1 1019 aa18.08■□□□□ 0.48
CSNK1D-224ENST00000584672 SNCAIPQ9Y6H5 919 aa18.08■□□□□ 0.48
CSNK1D-224ENST00000584672 SPDYE5A6NIY4 337 aa18.07■□□□□ 0.48
CSNK1D-224ENST00000584672 CETPP11597 493 aa18.07■□□□□ 0.48
CSNK1D-224ENST00000584672 CCL5P13501 91 aa18.07■□□□□ 0.48
CSNK1D-224ENST00000584672 ZKSCAN4Q969J2 545 aaPredicted RBP18.07■□□□□ 0.48
CSNK1D-224ENST00000584672 LRCH3Q96II8 777 aa18.07■□□□□ 0.48
CSNK1D-224ENST00000584672 TRIM47Q96LD4 638 aa18.07■□□□□ 0.48
CSNK1D-224ENST00000584672 HTATIP2Q9BUP3 242 aa18.07■□□□□ 0.48
CSNK1D-224ENST00000584672 PRO3102Q9H379 93 aa18.07■□□□□ 0.48
CSNK1D-224ENST00000584672 BIN2Q9UBW5 565 aaPredicted RBP18.07■□□□□ 0.48
CSNK1D-224ENST00000584672 CUL9Q8IWT3 2517 aa18.07■□□□□ 0.48
CSNK1D-224ENST00000584672 PSMC4P43686 418 aa18.06■□□□□ 0.48
CSNK1D-224ENST00000584672 TNNI2P48788 182 aa18.06■□□□□ 0.48
CSNK1D-224ENST00000584672 CALD1Q05682 793 aaKnown RBP18.06■□□□□ 0.48
CSNK1D-224ENST00000584672 RAET1EQ8TD07 263 aa18.06■□□□□ 0.48
CSNK1D-224ENST00000584672 TSR2Q969E8 191 aaKnown RBP18.06■□□□□ 0.48
CSNK1D-224ENST00000584672 ZNF594Q96JF6 807 aaPredicted RBP18.06■□□□□ 0.48
CSNK1D-224ENST00000584672 WRNIP1Q96S55 665 aa18.06■□□□□ 0.48
CSNK1D-224ENST00000584672 SRRDQ9UH36 339 aa18.06■□□□□ 0.48
CSNK1D-224ENST00000584672 COL6A3P12111 3177 aa18.06■□□□□ 0.48
CSNK1D-224ENST00000584672 IRF6O14896 467 aa18.05■□□□□ 0.48
CSNK1D-224ENST00000584672 OSBPP22059 807 aa18.05■□□□□ 0.48
CSNK1D-224ENST00000584672 GRK4P32298 578 aa18.05■□□□□ 0.48
CSNK1D-224ENST00000584672 CRKP46108 304 aa18.05■□□□□ 0.48
CSNK1D-224ENST00000584672 IFIT5Q13325 482 aaKnown RBP18.05■□□□□ 0.48
CSNK1D-224ENST00000584672 SNAPC2Q13487 334 aa18.05■□□□□ 0.48
CSNK1D-224ENST00000584672 ERO1BQ86YB8 467 aa18.05■□□□□ 0.48
CSNK1D-224ENST00000584672 RNF208Q9H0X6 261 aa18.05■□□□□ 0.48
CSNK1D-224ENST00000584672 SERPINA10Q9UK55 444 aa18.05■□□□□ 0.48
CSNK1D-224ENST00000584672 RIPOR2Q9Y4F9 1068 aa18.05■□□□□ 0.48
CSNK1D-224ENST00000584672 NR2E3Q9Y5X4 410 aa18.05■□□□□ 0.48
CSNK1D-224ENST00000584672 FAM205AQ6ZU69 1335 aa18.04■□□□□ 0.48
CSNK1D-224ENST00000584672 MYPNQ86TC9 1320 aa18.04■□□□□ 0.48
CSNK1D-224ENST00000584672 ZBTB7BO15156 539 aaPredicted RBP18.04■□□□□ 0.48
CSNK1D-224ENST00000584672 FMNL1O95466 1100 aaPredicted RBP18.04■□□□□ 0.48
CSNK1D-224ENST00000584672 GNRH1P01148 92 aa18.04■□□□□ 0.48
CSNK1D-224ENST00000584672 GYG1P46976 350 aa18.04■□□□□ 0.48
CSNK1D-224ENST00000584672 PRMT2P55345 433 aa18.04■□□□□ 0.48
CSNK1D-224ENST00000584672 GRIK5Q16478 980 aa18.04■□□□□ 0.48
CSNK1D-224ENST00000584672 C17orf99Q6UX52 265 aa18.04■□□□□ 0.48
CSNK1D-224ENST00000584672 UBE2Q1Q7Z7E8 422 aa18.04■□□□□ 0.48
CSNK1D-224ENST00000584672 MYH16Q9H6N6 1097 aa18.04■□□□□ 0.48
CSNK1D-224ENST00000584672 FARP2O94887 1054 aaPredicted RBP18.03■□□□□ 0.48
CSNK1D-224ENST00000584672 SLC4A2P04920 1241 aa18.03■□□□□ 0.48
CSNK1D-224ENST00000584672 GJB1P08034 283 aa18.03■□□□□ 0.48
CSNK1D-224ENST00000584672 GJA8P48165 433 aa18.03■□□□□ 0.48
CSNK1D-224ENST00000584672 NKX2-3Q8TAU0 364 aa18.03■□□□□ 0.48
CSNK1D-224ENST00000584672 CHMP4AQ9BY43 222 aa18.03■□□□□ 0.48
CSNK1D-224ENST00000584672 IQSEC3Q9UPP2 1182 aaPredicted RBP18.03■□□□□ 0.48
CSNK1D-224ENST00000584672 A0A0C4DFX4 3053 aa18.02■□□□□ 0.48
CSNK1D-224ENST00000584672 FOXO4P98177 505 aa18.02■□□□□ 0.48
CSNK1D-224ENST00000584672 TAF7LQ5H9L4 462 aa18.02■□□□□ 0.48
CSNK1D-224ENST00000584672 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.02■□□□□ 0.48
CSNK1D-224ENST00000584672 CNNM1Q9NRU3 951 aa18.02■□□□□ 0.48
CSNK1D-224ENST00000584672 FLIIQ13045 1269 aa18.01■□□□□ 0.47
CSNK1D-224ENST00000584672 CHAF1AQ13111 956 aaPredicted RBP18.01■□□□□ 0.47
CSNK1D-224ENST00000584672 PPIL2Q13356 520 aa18.01■□□□□ 0.47
CSNK1D-224ENST00000584672 FKBP5Q13451 457 aaPredicted RBP18.01■□□□□ 0.47
CSNK1D-224ENST00000584672 TDRD7Q8NHU6 1098 aaKnown RBP18.01■□□□□ 0.47
CSNK1D-224ENST00000584672 U2AF1L4Q8WU68 220 aaKnown RBP18.01■□□□□ 0.47
CSNK1D-224ENST00000584672 DNAAF4Q8WXU2 420 aa18.01■□□□□ 0.47
CSNK1D-224ENST00000584672 UNC93B1Q9H1C4 597 aa18.01■□□□□ 0.47
CSNK1D-224ENST00000584672 ZCCHC17Q9NP64 241 aaKnown RBP18.01■□□□□ 0.47
CSNK1D-224ENST00000584672 STAP2Q9UGK3 403 aa18.01■□□□□ 0.47
CSNK1D-224ENST00000584672 PRKCZQ05513 592 aa18■□□□□ 0.47
CSNK1D-224ENST00000584672 LMBR1LQ6UX01 489 aa18■□□□□ 0.47
CSNK1D-224ENST00000584672 LDHAL6AQ6ZMR3 332 aa18■□□□□ 0.47
CSNK1D-224ENST00000584672 LINS1Q8NG48 757 aa18■□□□□ 0.47
CSNK1D-224ENST00000584672 MGAMO43451 1857 aa18■□□□□ 0.47
CSNK1D-224ENST00000584672 PDHXO00330 501 aa17.99■□□□□ 0.47
CSNK1D-224ENST00000584672 EVI5O60447 810 aa17.99■□□□□ 0.47
CSNK1D-224ENST00000584672 HOXD10P28358 340 aa17.99■□□□□ 0.47
CSNK1D-224ENST00000584672 HIBADHP31937 336 aaKnown RBP17.99■□□□□ 0.47
CSNK1D-224ENST00000584672 INPP5BP32019 993 aa17.99■□□□□ 0.47
CSNK1D-224ENST00000584672 UBXN2AP68543 259 aa17.99■□□□□ 0.47
CSNK1D-224ENST00000584672 TWISTNBQ3B726 338 aaPredicted RBP17.99■□□□□ 0.47
CSNK1D-224ENST00000584672 EPHA10Q5JZY3 1008 aa17.99■□□□□ 0.47
CSNK1D-224ENST00000584672 MIGA2Q7L4E1 593 aa17.99■□□□□ 0.47
CSNK1D-224ENST00000584672 ALPK3Q96L96 1907 aa17.99■□□□□ 0.47
CSNK1D-224ENST00000584672 ADGRA2Q96PE1 1338 aa17.98■□□□□ 0.47
CSNK1D-224ENST00000584672 FAM84BQ96KN1 310 aaPredicted RBP17.98■□□□□ 0.47
CSNK1D-224ENST00000584672 GABRQQ9UN88 632 aa17.98■□□□□ 0.47
CSNK1D-224ENST00000584672 DDX10Q13206 875 aaKnown RBP17.97■□□□□ 0.47
CSNK1D-224ENST00000584672 CCDC57Q2TAC2 916 aa17.97■□□□□ 0.47
CSNK1D-224ENST00000584672 ANKRD23Q86SG2 305 aa17.97■□□□□ 0.47
CSNK1D-224ENST00000584672 TMOD2Q9NZR1 351 aa17.97■□□□□ 0.47
CSNK1D-224ENST00000584672 LAMA3Q16787 3333 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms