RNA–Protein interactions for RNA: ENST00000584582.5

TOP3A-217, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 3,661 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-217ENST00000584582 LRMPQ12912 555 aa13.11□□□□□ -0.31
TOP3A-217ENST00000584582 NAA16Q6N069 864 aaPredicted RBP13.11□□□□□ -0.31
TOP3A-217ENST00000584582 NLRP3Q96P20 1036 aa13.11□□□□□ -0.31
TOP3A-217ENST00000584582 ISCA1Q9BUE6 129 aa13.11□□□□□ -0.31
TOP3A-217ENST00000584582 ANGEL1Q9UNK9 670 aaKnown RBP13.11□□□□□ -0.31
TOP3A-217ENST00000584582 RASGRF1Q13972 1273 aa13.11□□□□□ -0.31
TOP3A-217ENST00000584582 DHX8Q14562 1220 aaKnown RBP13.11□□□□□ -0.31
TOP3A-217ENST00000584582 VSIG10Q8N0Z9 540 aa13.11□□□□□ -0.31
TOP3A-217ENST00000584582 AATFQ9NY61 560 aaKnown RBP eCLIP13.11□□□□□ -0.31
TOP3A-217ENST00000584582 STX8Q9UNK0 236 aa13.11□□□□□ -0.31
TOP3A-217ENST00000584582 MRPS27Q92552 414 aaKnown RBP13.1□□□□□ -0.31
TOP3A-217ENST00000584582 CLIC4Q9Y696 253 aa13.1□□□□□ -0.31
TOP3A-217ENST00000584582 C6orf229H3BNL8 230 aa13.1□□□□□ -0.31
TOP3A-217ENST00000584582 CHRNDQ07001 517 aa13.1□□□□□ -0.31
TOP3A-217ENST00000584582 ZBTB9Q96C00 473 aa13.1□□□□□ -0.31
TOP3A-217ENST00000584582 GPR101Q96P66 508 aaPredicted RBP13.1□□□□□ -0.31
TOP3A-217ENST00000584582 DNAJC5Q9H3Z4 198 aa13.1□□□□□ -0.31
TOP3A-217ENST00000584582 NRBP1Q9UHY1 535 aa13.1□□□□□ -0.31
TOP3A-217ENST00000584582 TSPY2A6NKD2 308 aa13.1□□□□□ -0.31
TOP3A-217ENST00000584582 PFKFB2O60825 505 aa13.1□□□□□ -0.31
TOP3A-217ENST00000584582 RTN1Q16799 776 aa13.1□□□□□ -0.31
TOP3A-217ENST00000584582 USPL1Q5W0Q7 1092 aa13.1□□□□□ -0.31
TOP3A-217ENST00000584582 PPP1R9BQ96SB3 815 aa13.1□□□□□ -0.31
TOP3A-217ENST00000584582 MKNK2Q9HBH9 465 aa13.1□□□□□ -0.31
TOP3A-217ENST00000584582 MARCH6O60337 910 aa13.09□□□□□ -0.31
TOP3A-217ENST00000584582 AKAP12Q02952 1782 aa13.09□□□□□ -0.31
TOP3A-217ENST00000584582 NOLC1Q14978 699 aaKnown RBP eCLIP13.09□□□□□ -0.31
TOP3A-217ENST00000584582 CFAP100Q494V2 611 aa13.09□□□□□ -0.31
TOP3A-217ENST00000584582 OLFM4Q6UX06 510 aa13.09□□□□□ -0.31
TOP3A-217ENST00000584582 CNNM3Q8NE01 707 aa13.09□□□□□ -0.31
TOP3A-217ENST00000584582 USP42Q9H9J4 1324 aaKnown RBP13.09□□□□□ -0.31
TOP3A-217ENST00000584582 UTYO14607 1347 aa13.09□□□□□ -0.31
TOP3A-217ENST00000584582 MAGEB6P1A0A0J9YX57 407 aa13.09□□□□□ -0.31
TOP3A-217ENST00000584582 EPB41L2O43491 1005 aaKnown RBP13.09□□□□□ -0.31
TOP3A-217ENST00000584582 ERFEQ4G0M1 354 aa13.09□□□□□ -0.31
TOP3A-217ENST00000584582 FAM47AQ5JRC9 791 aa13.09□□□□□ -0.31
TOP3A-217ENST00000584582 CLEC17AQ6ZS10 378 aa13.09□□□□□ -0.31
TOP3A-217ENST00000584582 JMYQ8N9B5 988 aa13.09□□□□□ -0.31
TOP3A-217ENST00000584582 PGBD1Q96JS3 809 aa13.09□□□□□ -0.31
TOP3A-217ENST00000584582 CLIC6Q96NY7 704 aa13.09□□□□□ -0.31
TOP3A-217ENST00000584582 NOL7Q9UMY1 257 aaKnown RBP13.09□□□□□ -0.31
TOP3A-217ENST00000584582 UBE2Q2LH0YL09 131 aa13.09□□□□□ -0.31
TOP3A-217ENST00000584582 AFMP43652 599 aa13.09□□□□□ -0.31
TOP3A-217ENST00000584582 DYNLL1P63167 89 aaKnown RBP13.09□□□□□ -0.31
TOP3A-217ENST00000584582 AMOTL1Q8IY63 956 aa13.09□□□□□ -0.31
TOP3A-217ENST00000584582 IFNL3Q8IZI9 196 aa13.09□□□□□ -0.31
TOP3A-217ENST00000584582 SENP2Q9HC62 589 aa13.09□□□□□ -0.31
TOP3A-217ENST00000584582 ANO10Q9NW15 660 aa13.09□□□□□ -0.31
TOP3A-217ENST00000584582 XBP1P17861 261 aa13.08□□□□□ -0.32
TOP3A-217ENST00000584582 SYKP43405 635 aa13.08□□□□□ -0.32
TOP3A-217ENST00000584582 IQCA1Q86XH1 822 aa13.08□□□□□ -0.32
TOP3A-217ENST00000584582 SETD1AO15047 1707 aaKnown RBP13.08□□□□□ -0.32
TOP3A-217ENST00000584582 KRT40Q6A162 431 aa13.08□□□□□ -0.32
TOP3A-217ENST00000584582 TBC1D10CQ8IV04 446 aa13.08□□□□□ -0.32
TOP3A-217ENST00000584582 LCORLQ8N3X6 602 aa13.08□□□□□ -0.32
TOP3A-217ENST00000584582 STAMQ92783 540 aa13.08□□□□□ -0.32
TOP3A-217ENST00000584582 AK7Q96M32 723 aa13.08□□□□□ -0.32
TOP3A-217ENST00000584582 CCNL1Q9UK58 526 aaPredicted RBP13.08□□□□□ -0.32
TOP3A-217ENST00000584582 SLC4A9Q96Q91 983 aa13.08□□□□□ -0.32
TOP3A-217ENST00000584582 TMX4Q9H1E5 349 aaPredicted RBP13.08□□□□□ -0.32
TOP3A-217ENST00000584582 MCM9Q9NXL9 1143 aa13.08□□□□□ -0.32
TOP3A-217ENST00000584582 CASP7P55210 303 aa13.07□□□□□ -0.32
TOP3A-217ENST00000584582 SAP30BPQ9UHR5 308 aaKnown RBP13.07□□□□□ -0.32
TOP3A-217ENST00000584582 TOM1O60784 492 aa13.07□□□□□ -0.32
TOP3A-217ENST00000584582 CIAO1O76071 339 aa13.07□□□□□ -0.32
TOP3A-217ENST00000584582 IL6STP40189 918 aaPredicted RBP13.07□□□□□ -0.32
TOP3A-217ENST00000584582 IFIT1BQ5T764 474 aaKnown RBP13.07□□□□□ -0.32
TOP3A-217ENST00000584582 TMC6Q7Z403 805 aa13.07□□□□□ -0.32
TOP3A-217ENST00000584582 CPLX3Q8WVH0 158 aa13.07□□□□□ -0.32
TOP3A-217ENST00000584582 CABP5Q9NP86 173 aa13.07□□□□□ -0.32
TOP3A-217ENST00000584582 PXDNLA1KZ92 1463 aa13.07□□□□□ -0.32
TOP3A-217ENST00000584582 RIMBP2O15034 1052 aa13.07□□□□□ -0.32
TOP3A-217ENST00000584582 ADD2P35612 726 aa13.07□□□□□ -0.32
TOP3A-217ENST00000584582 STX1AQ16623 288 aa13.07□□□□□ -0.32
TOP3A-217ENST00000584582 UIMC1Q96RL1 719 aa13.07□□□□□ -0.32
TOP3A-217ENST00000584582 CLSTN2Q9H4D0 955 aa13.07□□□□□ -0.32
TOP3A-217ENST00000584582 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.07□□□□□ -0.32
TOP3A-217ENST00000584582 PCDHA7Q9UN72 937 aa13.07□□□□□ -0.32
TOP3A-217ENST00000584582 V9GYY5 206 aaPredicted RBP13.07□□□□□ -0.32
TOP3A-217ENST00000584582 BTBD18B2RXH4 712 aa13.06□□□□□ -0.32
TOP3A-217ENST00000584582 CYB5R4Q7L1T6 521 aa13.06□□□□□ -0.32
TOP3A-217ENST00000584582 ZSWIM5Q9P217 1185 aa13.06□□□□□ -0.32
TOP3A-217ENST00000584582 RTCBQ9Y3I0 505 aaKnown RBP13.06□□□□□ -0.32
TOP3A-217ENST00000584582 RIPOR2Q9Y4F9 1068 aa13.06□□□□□ -0.32
TOP3A-217ENST00000584582 USP17L12C9JPN9 530 aa13.06□□□□□ -0.32
TOP3A-217ENST00000584582 USP17L21D6R901 530 aa13.06□□□□□ -0.32
TOP3A-217ENST00000584582 NDUFA8P51970 172 aa13.06□□□□□ -0.32
TOP3A-217ENST00000584582 RESTQ13127 1097 aa13.06□□□□□ -0.32
TOP3A-217ENST00000584582 PLIN2Q99541 437 aa13.06□□□□□ -0.32
TOP3A-217ENST00000584582 V9GY48 417 aaPredicted RBP13.06□□□□□ -0.32
TOP3A-217ENST00000584582 MED23Q9ULK4 1368 aa13.06□□□□□ -0.32
TOP3A-217ENST00000584582 CATIPQ7Z7H3 387 aa13.06□□□□□ -0.32
TOP3A-217ENST00000584582 CTCFLQ8NI51 663 aaPredicted RBP13.06□□□□□ -0.32
TOP3A-217ENST00000584582 BRMS1Q9HCU9 246 aa13.06□□□□□ -0.32
TOP3A-217ENST00000584582 VPS54Q9P1Q0 977 aa13.06□□□□□ -0.32
TOP3A-217ENST00000584582 MRVI1Q9Y6F6 885 aa13.06□□□□□ -0.32
TOP3A-217ENST00000584582 SOS2Q07890 1332 aaPredicted RBP13.05□□□□□ -0.32
TOP3A-217ENST00000584582 RBM5P52756 815 aaKnown RBP eCLIP13.05□□□□□ -0.32
TOP3A-217ENST00000584582 STX17P56962 302 aa13.05□□□□□ -0.32
TOP3A-217ENST00000584582 LRP10Q7Z4F1 713 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms