RNA–Protein interactions for RNA: ENST00000584517.1

KRT23-208, Transcript of keratin 23, human

TSL 2

Gene KRT23, Length 687 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KRT23-208	ENST00000584517	RREB1	Q92766	1687 aa		11.44	□□□□□ -0.58
KRT23-208	ENST00000584517	MEN1	O00255	615 aa		11.44	□□□□□ -0.58
KRT23-208	ENST00000584517	MYL6B	P14649	208 aa		11.44	□□□□□ -0.58
KRT23-208	ENST00000584517	HMGB2	P26583	209 aa	Known RBP	11.44	□□□□□ -0.58
KRT23-208	ENST00000584517	CANX	P27824	592 aa	Known RBP	11.44	□□□□□ -0.58
KRT23-208	ENST00000584517	CRKL	P46109	303 aa	Known RBP	11.44	□□□□□ -0.58
KRT23-208	ENST00000584517	PIP4K2A	P48426	406 aa	Predicted RBP	11.44	□□□□□ -0.58
KRT23-208	ENST00000584517	EZH2	Q15910	746 aa	Known RBP	11.44	□□□□□ -0.58
KRT23-208	ENST00000584517	DEFB132	Q7Z7B7	95 aa		11.44	□□□□□ -0.58
KRT23-208	ENST00000584517	CAMKK2	Q96RR4	588 aa		11.44	□□□□□ -0.58
KRT23-208	ENST00000584517	DDX21	Q9NR30	783 aa	Known RBP eCLIP	11.44	□□□□□ -0.58
KRT23-208	ENST00000584517	CCDC87	Q9NVE4	849 aa		11.44	□□□□□ -0.58
KRT23-208	ENST00000584517	BCAR3	O75815	825 aa		11.43	□□□□□ -0.58
KRT23-208	ENST00000584517	ANXA1	P04083	346 aa		11.43	□□□□□ -0.58
KRT23-208	ENST00000584517	INTS5	Q6P9B9	1019 aa	Known RBP	11.43	□□□□□ -0.58
KRT23-208	ENST00000584517	ZSCAN1	Q8NBB4	408 aa		11.43	□□□□□ -0.58
KRT23-208	ENST00000584517	RNF217	Q8TC41	542 aa		11.43	□□□□□ -0.58
KRT23-208	ENST00000584517	NLRP3	Q96P20	1036 aa		11.43	□□□□□ -0.58
KRT23-208	ENST00000584517	HYPK	Q9NX55	129 aa		11.43	□□□□□ -0.58
KRT23-208	ENST00000584517	CNTNAP4	Q9C0A0	1308 aa		11.42	□□□□□ -0.58
KRT23-208	ENST00000584517	VSIG8	P0DPA2	414 aa		11.42	□□□□□ -0.58
KRT23-208	ENST00000584517	ERVK-9	P63128	1117 aa		11.42	□□□□□ -0.58
KRT23-208	ENST00000584517	PROSER3	Q2NL68	480 aa		11.42	□□□□□ -0.58
KRT23-208	ENST00000584517	NBPF10	Q6P3W6	841 aa	Known RBP	11.42	□□□□□ -0.58
KRT23-208	ENST00000584517	LYSMD3	Q7Z3D4	306 aa		11.42	□□□□□ -0.58
KRT23-208	ENST00000584517	NBPF15	Q8N660	670 aa		11.42	□□□□□ -0.58
KRT23-208	ENST00000584517	CEP126	Q9P2H0	1117 aa		11.42	□□□□□ -0.58
KRT23-208	ENST00000584517	ZBTB1	Q9Y2K1	713 aa		11.42	□□□□□ -0.58
KRT23-208	ENST00000584517	NUP188	Q5SRE5	1749 aa		11.41	□□□□□ -0.58
KRT23-208	ENST00000584517	PRICKLE2	Q7Z3G6	844 aa		11.41	□□□□□ -0.58
KRT23-208	ENST00000584517	CYP2U1	Q7Z449	544 aa		11.41	□□□□□ -0.58
KRT23-208	ENST00000584517	NPM2	Q86SE8	214 aa	Known RBP	11.41	□□□□□ -0.58
KRT23-208	ENST00000584517	KDF1	Q8NAX2	398 aa	Predicted RBP	11.41	□□□□□ -0.58
KRT23-208	ENST00000584517	FRAT1	Q92837	279 aa	Predicted RBP	11.41	□□□□□ -0.58
KRT23-208	ENST00000584517	PHAX	Q9H814	394 aa	Known RBP	11.41	□□□□□ -0.58
KRT23-208	ENST00000584517	UBR3	Q6ZT12	1888 aa		11.4	□□□□□ -0.58
KRT23-208	ENST00000584517	KIF16B	Q96L93	1317 aa		11.4	□□□□□ -0.58
KRT23-208	ENST00000584517		A0A1W2PRU2	124 aa		11.4	□□□□□ -0.58
KRT23-208	ENST00000584517	GPR37L1	O60883	481 aa		11.4	□□□□□ -0.58
KRT23-208	ENST00000584517	MYC	P01106	439 aa	Predicted RBP	11.4	□□□□□ -0.58
KRT23-208	ENST00000584517	IL6ST	P40189	918 aa	Predicted RBP	11.4	□□□□□ -0.58
KRT23-208	ENST00000584517	ABL2	P42684	1182 aa		11.4	□□□□□ -0.58
KRT23-208	ENST00000584517	AIMP1	Q12904	312 aa	Known RBP	11.4	□□□□□ -0.58
KRT23-208	ENST00000584517	G2E3	Q7L622	706 aa		11.4	□□□□□ -0.58
KRT23-208	ENST00000584517	XAGE3	Q8WTP9	111 aa		11.4	□□□□□ -0.58
KRT23-208	ENST00000584517	GDPD2	Q9HCC8	539 aa		11.4	□□□□□ -0.58
KRT23-208	ENST00000584517	NOB1	Q9ULX3	412 aa	Known RBP	11.4	□□□□□ -0.58
KRT23-208	ENST00000584517	SUPT16H	Q9Y5B9	1047 aa	Known RBP	11.4	□□□□□ -0.58
KRT23-208	ENST00000584517	SLC35F4	A4IF30	521 aa		11.39	□□□□□ -0.59
KRT23-208	ENST00000584517	IPO8	O15397	1037 aa	Known RBP	11.39	□□□□□ -0.59
KRT23-208	ENST00000584517	RPS6KA4	O75676	772 aa		11.39	□□□□□ -0.59
KRT23-208	ENST00000584517	RNF144A	P50876	292 aa	Predicted RBP	11.39	□□□□□ -0.59
KRT23-208	ENST00000584517	EIF5	P55010	431 aa	Known RBP	11.39	□□□□□ -0.59
KRT23-208	ENST00000584517	FLII	Q13045	1269 aa		11.39	□□□□□ -0.59
KRT23-208	ENST00000584517	COPS6	Q7L5N1	327 aa		11.39	□□□□□ -0.59
KRT23-208	ENST00000584517	LRP10	Q7Z4F1	713 aa		11.39	□□□□□ -0.59
KRT23-208	ENST00000584517	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	11.39	□□□□□ -0.59
KRT23-208	ENST00000584517	ARX	Q96QS3	562 aa		11.39	□□□□□ -0.59
KRT23-208	ENST00000584517	RTCB	Q9Y3I0	505 aa	Known RBP	11.39	□□□□□ -0.59
KRT23-208	ENST00000584517	TUBGCP6	Q96RT7	1819 aa		11.39	□□□□□ -0.59
KRT23-208	ENST00000584517	PTPRC	P08575	1304 aa		11.38	□□□□□ -0.59
KRT23-208	ENST00000584517	CDC14C	A4D256	554 aa		11.38	□□□□□ -0.59
KRT23-208	ENST00000584517	DDX58	O95786	925 aa	Known RBP	11.38	□□□□□ -0.59
KRT23-208	ENST00000584517	FKBP5	Q13451	457 aa	Predicted RBP	11.38	□□□□□ -0.59
KRT23-208	ENST00000584517	SLFNL1	Q499Z3	407 aa		11.38	□□□□□ -0.59
KRT23-208	ENST00000584517	ZKSCAN2	Q63HK3	967 aa		11.38	□□□□□ -0.59
KRT23-208	ENST00000584517	ARFGEF2	Q9Y6D5	1785 aa		11.37	□□□□□ -0.59
KRT23-208	ENST00000584517		A0A087WZG4	1122 aa		11.37	□□□□□ -0.59
KRT23-208	ENST00000584517	PLIN1	O60240	522 aa		11.37	□□□□□ -0.59
KRT23-208	ENST00000584517	ITGA6	P23229	1130 aa		11.37	□□□□□ -0.59
KRT23-208	ENST00000584517	SCTR	P47872	440 aa		11.37	□□□□□ -0.59
KRT23-208	ENST00000584517	RRP1	P56182	461 aa	Known RBP	11.37	□□□□□ -0.59
KRT23-208	ENST00000584517	ZNF827	Q17R98	1081 aa		11.37	□□□□□ -0.59
KRT23-208	ENST00000584517	TRAPPC3L	Q5T215	181 aa		11.37	□□□□□ -0.59
KRT23-208	ENST00000584517	FOXD4L5	Q5VV16	416 aa	Predicted RBP	11.37	□□□□□ -0.59
KRT23-208	ENST00000584517	KIF6	Q6ZMV9	814 aa		11.37	□□□□□ -0.59
KRT23-208	ENST00000584517	TTLL7	Q6ZT98	887 aa		11.37	□□□□□ -0.59
KRT23-208	ENST00000584517	SMIM5	Q71RC9	77 aa		11.37	□□□□□ -0.59
KRT23-208	ENST00000584517	ARHGAP45	Q92619	1136 aa		11.37	□□□□□ -0.59
KRT23-208	ENST00000584517	API5	Q9BZZ5	524 aa	Known RBP	11.37	□□□□□ -0.59
KRT23-208	ENST00000584517	STK32B	Q9NY57	414 aa		11.37	□□□□□ -0.59
KRT23-208	ENST00000584517	TFCP2L1	Q9NZI6	479 aa		11.37	□□□□□ -0.59
KRT23-208	ENST00000584517	COL15A1	P39059	1388 aa		11.37	□□□□□ -0.59
KRT23-208	ENST00000584517	C4A	P0C0L4	1744 aa		11.37	□□□□□ -0.59
KRT23-208	ENST00000584517	NUP98	P52948	1817 aa		11.37	□□□□□ -0.59
KRT23-208	ENST00000584517	VAC14	Q08AM6	782 aa		11.36	□□□□□ -0.59
KRT23-208	ENST00000584517	WASHC4	Q2M389	1173 aa		11.36	□□□□□ -0.59
KRT23-208	ENST00000584517	KSR2	Q6VAB6	950 aa		11.36	□□□□□ -0.59
KRT23-208	ENST00000584517	ATF7IP	Q6VMQ6	1270 aa		11.36	□□□□□ -0.59
KRT23-208	ENST00000584517	SV2A	Q7L0J3	742 aa		11.36	□□□□□ -0.59
KRT23-208	ENST00000584517	AMIGO3	Q86WK7	504 aa		11.36	□□□□□ -0.59
KRT23-208	ENST00000584517	VWA5B2	Q8N398	1253 aa		11.36	□□□□□ -0.59
KRT23-208	ENST00000584517	PLBD2	Q8NHP8	589 aa		11.36	□□□□□ -0.59
KRT23-208	ENST00000584517	RNF123	Q5XPI4	1314 aa		11.35	□□□□□ -0.59
KRT23-208	ENST00000584517	QSER1	Q2KHR3	1735 aa		11.35	□□□□□ -0.59
KRT23-208	ENST00000584517	PI4KAP2	A4QPH2	592 aa		11.35	□□□□□ -0.59
KRT23-208	ENST00000584517	TRIM27	P14373	513 aa		11.35	□□□□□ -0.59
KRT23-208	ENST00000584517	SSFA2	P28290	1259 aa		11.35	□□□□□ -0.59
KRT23-208	ENST00000584517	GPC1	P35052	558 aa		11.35	□□□□□ -0.59
KRT23-208	ENST00000584517	RFC4	P35249	363 aa		11.35	□□□□□ -0.59

Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms