RNA–Protein interactions for RNA: ENST00000584052.5

RIOK3-208, Transcript of RIO kinase 3, humanhuman

TSL 2

Gene RIOK3, Length 659 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIOK3-208ENST00000584052 IFIT1P09914 478 aaKnown RBP18.97■□□□□ 0.63
RIOK3-208ENST00000584052 FBXO33Q7Z6M2 555 aa18.97■□□□□ 0.63
RIOK3-208ENST00000584052 TEKT1Q969V4 418 aa18.97■□□□□ 0.63
RIOK3-208ENST00000584052 CSADQ9Y600 493 aa18.97■□□□□ 0.63
RIOK3-208ENST00000584052 AOX1Q06278 1338 aa18.97■□□□□ 0.63
RIOK3-208ENST00000584052 WDHD1O75717 1129 aaPredicted RBP18.96■□□□□ 0.63
RIOK3-208ENST00000584052 OPTNQ96CV9 577 aa18.96■□□□□ 0.63
RIOK3-208ENST00000584052 ERO1AQ96HE7 468 aa18.96■□□□□ 0.63
RIOK3-208ENST00000584052 TMEM39BQ9GZU3 492 aa18.96■□□□□ 0.63
RIOK3-208ENST00000584052 UTYO14607 1347 aa18.96■□□□□ 0.63
RIOK3-208ENST00000584052 IGF2BP3O00425 579 aaKnown RBP eCLIP18.95■□□□□ 0.62
RIOK3-208ENST00000584052 BCAMP50895 628 aa18.95■□□□□ 0.62
RIOK3-208ENST00000584052 MAP3K9P80192 1104 aa18.95■□□□□ 0.62
RIOK3-208ENST00000584052 RABL6Q3YEC7 729 aaPredicted RBP18.95■□□□□ 0.62
RIOK3-208ENST00000584052 KLHDC4Q8TBB5 520 aa18.95■□□□□ 0.62
RIOK3-208ENST00000584052 SSH1Q8WYL5 1049 aa18.95■□□□□ 0.62
RIOK3-208ENST00000584052 HOOK2Q96ED9 719 aa18.94■□□□□ 0.62
RIOK3-208ENST00000584052 ZNF646O15015 1829 aaPredicted RBP18.93■□□□□ 0.62
RIOK3-208ENST00000584052 CACNB3P54284 484 aa18.93■□□□□ 0.62
RIOK3-208ENST00000584052 HDLBPQ00341 1268 aaKnown RBP18.93■□□□□ 0.62
RIOK3-208ENST00000584052 SP3Q02447 781 aa18.93■□□□□ 0.62
RIOK3-208ENST00000584052 CRHR2Q13324 411 aa18.93■□□□□ 0.62
RIOK3-208ENST00000584052 ARHGEF6Q15052 776 aa18.93■□□□□ 0.62
RIOK3-208ENST00000584052 PUM3Q15397 648 aaKnown RBP18.93■□□□□ 0.62
RIOK3-208ENST00000584052 ANKRD44Q8N8A2 993 aa18.93■□□□□ 0.62
RIOK3-208ENST00000584052 USP44Q9H0E7 712 aa18.93■□□□□ 0.62
RIOK3-208ENST00000584052 SLC34A2O95436 690 aa18.92■□□□□ 0.62
RIOK3-208ENST00000584052 SLC5A1P13866 664 aa18.92■□□□□ 0.62
RIOK3-208ENST00000584052 GJA5P36382 358 aa18.92■□□□□ 0.62
RIOK3-208ENST00000584052 GTF2A2P52657 109 aa18.92■□□□□ 0.62
RIOK3-208ENST00000584052 GRIK5Q16478 980 aa18.92■□□□□ 0.62
RIOK3-208ENST00000584052 OTOP1Q7RTM1 612 aa18.92■□□□□ 0.62
RIOK3-208ENST00000584052 CD99L2Q8TCZ2 262 aa18.92■□□□□ 0.62
RIOK3-208ENST00000584052 OTUD5Q96G74 571 aa18.92■□□□□ 0.62
RIOK3-208ENST00000584052 EFCC1Q9HA90 598 aa18.92■□□□□ 0.62
RIOK3-208ENST00000584052 SMC4Q9NTJ3 1288 aa18.92■□□□□ 0.62
RIOK3-208ENST00000584052 MAST3O60307 1309 aa18.92■□□□□ 0.62
RIOK3-208ENST00000584052 SSC5DA1L4H1 1573 aa18.91■□□□□ 0.62
RIOK3-208ENST00000584052 CCL15-CCL14A0A0B4J2E2 113 aa18.91■□□□□ 0.62
RIOK3-208ENST00000584052 CCL15Q16663 113 aa18.91■□□□□ 0.62
RIOK3-208ENST00000584052 INTS3Q68E01 1043 aaKnown RBP18.91■□□□□ 0.62
RIOK3-208ENST00000584052 TEPSINQ96N21 525 aa18.91■□□□□ 0.62
RIOK3-208ENST00000584052 ZFYVE28Q9HCC9 887 aa18.91■□□□□ 0.62
RIOK3-208ENST00000584052 PDE4DIPQ5VU43 2346 aa18.91■□□□□ 0.62
RIOK3-208ENST00000584052 EYA2O00167 538 aa18.9■□□□□ 0.62
RIOK3-208ENST00000584052 VGLL4Q14135 290 aa18.9■□□□□ 0.62
RIOK3-208ENST00000584052 TAF1CQ15572 869 aaPredicted RBP18.9■□□□□ 0.62
RIOK3-208ENST00000584052 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.9■□□□□ 0.62
RIOK3-208ENST00000584052 CDAN1Q8IWY9 1227 aa18.9■□□□□ 0.62
RIOK3-208ENST00000584052 WDR66Q8TBY9 1149 aa18.9■□□□□ 0.62
RIOK3-208ENST00000584052 ZDHHC15Q96MV8 337 aa18.9■□□□□ 0.62
RIOK3-208ENST00000584052 PTPN18Q99952 460 aa18.9■□□□□ 0.62
RIOK3-208ENST00000584052 MRIQ9BWK5 157 aa18.9■□□□□ 0.62
RIOK3-208ENST00000584052 GNL3LQ9NVN8 582 aaKnown RBP18.9■□□□□ 0.62
RIOK3-208ENST00000584052 HDAC5Q9UQL6 1122 aa18.9■□□□□ 0.62
RIOK3-208ENST00000584052 SUGT1Q9Y2Z0 365 aa18.9■□□□□ 0.62
RIOK3-208ENST00000584052 UBTFL1P0CB47 393 aaPredicted RBP18.89■□□□□ 0.61
RIOK3-208ENST00000584052 SLFN5Q08AF3 891 aa18.89■□□□□ 0.61
RIOK3-208ENST00000584052 PRPF38BQ5VTL8 546 aaKnown RBP18.89■□□□□ 0.61
RIOK3-208ENST00000584052 CNKSR2Q8WXI2 1034 aa18.89■□□□□ 0.61
RIOK3-208ENST00000584052 LPIN2Q92539 896 aa18.89■□□□□ 0.61
RIOK3-208ENST00000584052 SIL1Q9H173 461 aa18.89■□□□□ 0.61
RIOK3-208ENST00000584052 CEP126Q9P2H0 1117 aa18.89■□□□□ 0.61
RIOK3-208ENST00000584052 TESPA1A2RU30 521 aaPredicted RBP18.88■□□□□ 0.61
RIOK3-208ENST00000584052 ALDH1L2Q3SY69 923 aa18.88■□□□□ 0.61
RIOK3-208ENST00000584052 DCAF15Q66K64 600 aa18.88■□□□□ 0.61
RIOK3-208ENST00000584052 VGLL2Q8N8G2 317 aa18.88■□□□□ 0.61
RIOK3-208ENST00000584052 WRNIP1Q96S55 665 aa18.88■□□□□ 0.61
RIOK3-208ENST00000584052 PTPN22Q9Y2R2 807 aa18.88■□□□□ 0.61
RIOK3-208ENST00000584052 CETPP11597 493 aa18.87■□□□□ 0.61
RIOK3-208ENST00000584052 KIF22Q14807 665 aa18.87■□□□□ 0.61
RIOK3-208ENST00000584052 ECM29Q5VYK3 1845 aa18.87■□□□□ 0.61
RIOK3-208ENST00000584052 HHIPL2Q6UWX4 724 aa18.87■□□□□ 0.61
RIOK3-208ENST00000584052 FAM83AQ86UY5 434 aa18.87■□□□□ 0.61
RIOK3-208ENST00000584052 ERO1BQ86YB8 467 aa18.87■□□□□ 0.61
RIOK3-208ENST00000584052 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.87■□□□□ 0.61
RIOK3-208ENST00000584052 MS4A4AQ96JQ5 239 aa18.87■□□□□ 0.61
RIOK3-208ENST00000584052 FKBP1CQ5VVH2 108 aa18.86■□□□□ 0.61
RIOK3-208ENST00000584052 APOBEC3HQ6NTF7 200 aaKnown RBP18.86■□□□□ 0.61
RIOK3-208ENST00000584052 MIGA2Q7L4E1 593 aa18.86■□□□□ 0.61
RIOK3-208ENST00000584052 NBPF11Q86T75 865 aa18.86■□□□□ 0.61
RIOK3-208ENST00000584052 BRI3BPQ8WY22 251 aa18.86■□□□□ 0.61
RIOK3-208ENST00000584052 ZKSCAN4Q969J2 545 aaPredicted RBP18.86■□□□□ 0.61
RIOK3-208ENST00000584052 CDCA7LQ96GN5 454 aa18.86■□□□□ 0.61
RIOK3-208ENST00000584052 TMEM106CQ9BVX2 250 aa18.86■□□□□ 0.61
RIOK3-208ENST00000584052 FGFR2P21802 821 aa18.85■□□□□ 0.61
RIOK3-208ENST00000584052 SNAPC2Q13487 334 aa18.85■□□□□ 0.61
RIOK3-208ENST00000584052 NOB1Q9ULX3 412 aaKnown RBP18.85■□□□□ 0.61
RIOK3-208ENST00000584052 A0A1B0GUL6 1792 aa18.85■□□□□ 0.61
RIOK3-208ENST00000584052 KIF16BQ96L93 1317 aa18.84■□□□□ 0.61
RIOK3-208ENST00000584052 SPDYE5A6NIY4 337 aa18.84■□□□□ 0.61
RIOK3-208ENST00000584052 LDHBP07195 334 aaKnown RBP18.84■□□□□ 0.61
RIOK3-208ENST00000584052 TCP10Q12799 353 aa18.84■□□□□ 0.61
RIOK3-208ENST00000584052 ATP2B3Q16720 1220 aa18.84■□□□□ 0.61
RIOK3-208ENST00000584052 ZNF341Q9BYN7 854 aa18.84■□□□□ 0.61
RIOK3-208ENST00000584052 FAM43AQ8N2R8 423 aa18.83■□□□□ 0.6
RIOK3-208ENST00000584052 API5Q9BZZ5 524 aaKnown RBP18.83■□□□□ 0.6
RIOK3-208ENST00000584052 IRF6O14896 467 aa18.82■□□□□ 0.6
RIOK3-208ENST00000584052 ECM2O94769 699 aaPredicted RBP18.82■□□□□ 0.6
RIOK3-208ENST00000584052 RFX5P48382 616 aaPredicted RBP18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms